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Aliases for KIAA0087 Gene

Subcategory (RNA class) for KIAA0087 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KIAA0087 Gene

  • KIAA0087 LncRNA 2 3
  • KIAA0087 2

External Ids for KIAA0087 Gene

Previous GeneCards Identifiers for KIAA0087 Gene

  • GC07M026215
  • GC07M026315
  • GC07Mh26675
  • GC07Mh26345
  • GC07U901585

Summaries for KIAA0087 Gene

GeneCards Summary for KIAA0087 Gene

KIAA0087 (KIAA0087 LncRNA) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA0087 Gene

Genomics for KIAA0087 Gene

Regulatory Elements for KIAA0087 Gene

Enhancers for KIAA0087 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F026449 1.6 FANTOM5 Ensembl ENCODE 10.7 +89.0 89004 1.3 PKNOX1 JUN ZNF140 FEZF1 ZNF843 OSR2 CTBP1 ZNF692 FOS ZNF18 KIAA0087 C7orf71 LOC441204 LOC105375202 ENSG00000280255
GH07F026333 0.9 Ensembl ENCODE 10.3 +203.1 203073 4.1 HDGF ARID4B GLI4 FEZF1 ZNF2 ZNF121 GLIS2 ZNF302 ZNF143 KLF7 RPL23P7 HMGB3P20 TPM3P4 ENSG00000227386 KIAA0087 HOTAIRM1 HOXA11-AS LOC105375304 SNX10
GH07F026372 1.5 ENCODE 10.3 +163.8 163833 5.5 HDGF PKNOX1 ARID4B FEZF1 ZNF2 ZNF302 ZNF143 ZNF548 SP3 REST RPL23P7 TPM3P4 HMGB3P20 ENSG00000227386 HOXA10-AS HOXA9 MIR196B CBX3 HNRNPA2B1 KIAA0087
GH07F026862 1.1 ENCODE 10.3 -325.3 -325290 3.1 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 HOTAIRM1 HMGB3P20 TPM3P4 PSMC1P2 RPL23P7 HOXA-AS3 HOXA4 HOXA3 HOXA6 HOXA5
GH07F027095 2.8 VISTA FANTOM5 Ensembl ENCODE 10.3 -599.4 -599371 86.3 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 HOTAIRM1 HOXA-AS2 HOXA10-AS HOXA2 HOXA9 TPM3P4 HMGB3P20 PSMC1P2 RPL23P7 HOXA11-AS
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around KIAA0087 on UCSC Golden Path with GeneCards custom track

Genomic Location for KIAA0087 Gene

Chromosome:
7
Start:
26,533,121 bp from pter
End:
26,538,825 bp from pter
Size:
5,705 bases
Orientation:
Minus strand

Genomic View for KIAA0087 Gene

Genes around KIAA0087 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KIAA0087 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KIAA0087 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA0087 Gene

Proteins for KIAA0087 Gene

  • Protein details for KIAA0087 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14695-K0087_HUMAN
    Recommended name:
    Uncharacterized protein KIAA0087
    Protein Accession:
    Q14695
    Secondary Accessions:
    • A1A524
    • Q75MW1

    Protein attributes for KIAA0087 Gene

    Size:
    138 amino acids
    Molecular mass:
    14937 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA07639.2; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for KIAA0087 Gene

Post-translational modifications for KIAA0087 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for KIAA0087 Gene

Domains & Families for KIAA0087 Gene

Protein Domains for KIAA0087 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KIAA0087: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KIAA0087 Gene

Function for KIAA0087 Gene

Phenotypes for KIAA0087 Gene

GenomeRNAi human phenotypes for KIAA0087:
genes like me logo Genes that share phenotypes with KIAA0087: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KIAA0087 Gene

Localization for KIAA0087 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KIAA0087 Gene COMPARTMENTS Subcellular localization image for KIAA0087 gene
Compartment Confidence
cytosol 2
extracellular 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for KIAA0087 Gene

Pathways & Interactions for KIAA0087 Gene

SuperPathways for KIAA0087 Gene

No Data Available

Interacting Proteins for KIAA0087 Gene

Selected Interacting proteins: Q14695-K0087_HUMAN for KIAA0087 Gene via IID

Gene Ontology (GO) - Biological Process for KIAA0087 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KIAA0087 Gene

Transcripts for KIAA0087 Gene

mRNA/cDNA for KIAA0087 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KIAA0087 Gene

KIAA0087:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA0087 Gene

No ASD Table

Relevant External Links for KIAA0087 Gene

GeneLoc Exon Structure for
KIAA0087
ECgene alternative splicing isoforms for
KIAA0087

Expression for KIAA0087 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KIAA0087 Gene

mRNA differential expression in normal tissues according to GTEx for KIAA0087 Gene

This gene is overexpressed in Brain - Cerebellum (x9.6) and Brain - Cerebellar Hemisphere (x9.4).

NURSA nuclear receptor signaling pathways regulating expression of KIAA0087 Gene:

KIAA0087

SOURCE GeneReport for Unigene cluster for KIAA0087 Gene:

Hs.69749
genes like me logo Genes that share expression patterns with KIAA0087: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KIAA0087 Gene

Orthologs for KIAA0087 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for KIAA0087 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA0087 35
  • 96 (a)
OneToOne
Species where no ortholog for KIAA0087 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KIAA0087 Gene

ENSEMBL:
Gene Tree for KIAA0087 (if available)
TreeFam:
Gene Tree for KIAA0087 (if available)

Paralogs for KIAA0087 Gene

No data available for Paralogs for KIAA0087 Gene

Variants for KIAA0087 Gene

Sequence variations from dbSNP and Humsavar for KIAA0087 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10241879 -- 26,538,275(+) GGAAA(A/T)CACGG intron-variant
rs10245598 -- 26,538,886(+) TTTAT(A/G)TCATC upstream-variant-2KB
rs10270966 -- 26,537,943(+) AAAGA(C/T)ATCTT intron-variant
rs10277111 -- 26,534,360(+) CCCAG(C/G)ATTTT nc-transcript-variant
rs1047022 -- 26,540,630(+) CATCC(A/G)TTTCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for KIAA0087 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER inversion 18451855

Variation tolerance for KIAA0087 Gene

Gene Damage Index Score: 0.63; 13.42% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for KIAA0087 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KIAA0087

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KIAA0087 Gene

Disorders for KIAA0087 Gene

Relevant External Links for KIAA0087

Genetic Association Database (GAD)
KIAA0087
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KIAA0087

No disorders were found for KIAA0087 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KIAA0087 Gene

Publications for KIAA0087 Gene

  1. Distinct expression profile of lncRNA in endometrial carcinoma. (PMID: 27748922) Xu J. … Lv J. (Oncol. Rep. 2016) 2 3 64
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4 64
  3. Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1. (PMID: 7788527) Nagase T. … Nomura N. (DNA Res. 1995) 3 4 64
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  5. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3 64

Products for KIAA0087 Gene

Sources for KIAA0087 Gene

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