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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KHDRBS3 Gene

protein-coding   GIFtS: 55
GCID: GC08P136538

KH domain containing, RNA binding, signal transduction associated...

 Explore 27 diseases affiliated with
KHDRBS3 via our new
 Human Malady Compendium 
Biological research products
for KHDRBS3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
KH Domain Containing, RNA Binding, Signal Transduction Associated 31 2     Sam68-Like Mammalian Protein 22 3
SALP1 2 3 5     RNA-Binding Protein T-Star2 3
SLM21 2 3 5     TSTAR2 5
SLM-21 2 3     KH Domain-Containing, RNA-Binding, Signal Transduction-Associated Protein 32
Etle1 2     Sam68-Like Phosphotyrosine Protein, T-STAR2
T-STAR1 2     Sam68-Like Phosphotyrosine Protein3
Etoile1     ETOILE5

External Ids:    HGNC: 181171   Entrez Gene: 106562   Ensembl: ENSG000001317737   OMIM: 6104215   UniProtKB: O755253   

Export aliases for KHDRBS3 gene to outside databases

Previous GC identifers: GC08P135242 GC08P136579 GC08P136154 GC08P136440 GC08P131785


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: KHDR3_HUMAN, O75525
Function: RNA-binding protein that plays a role in the regulation of alternative splicing and influences mRNA splice
site selection and exon inclusion. May play a role as a negative regulator of cell growth. Inhibits cell
proliferation. Involved in splice site selection of vascular endothelial growth factor. Induces an increased
concentration-dependent incorporation of exon in CD44 pre-mRNA by direct binding to purine-rich exonic enhancer.
RNA-binding abilities are down-regulated by tyrosine kinase PTK6. Involved in post-transcriptional regulation of HIV-1
gene expression. Binds preferentially to the 5'-[AU]UAAA-3' motif in vitro

Gene Wiki entry for KHDRBS3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000008.10  NC_018919.1  NT_008046.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KHDRBS3 gene promoter:
         GR   p300   NRSF form 1   GR-alpha   NRSF form 2   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for KHDRBS3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KHDRBS3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 8q24.2   Ensembl cytogenetic band:  8q24.23   HGNC cytogenetic band: 8q24.23

KHDRBS3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KHDRBS3 gene location

GeneLoc information about chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08P136538:  view genomic region     (about GC identifiers)

Start:
136,469,700 bp from pter      End:
136,668,965 bp from pter
Size:
199,266 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KHDR3_HUMAN, O75525 (See protein sequence)
Recommended Name: KH domain-containing, RNA-binding, signal transduction-associated protein 3  
Size: 346 amino acids; 38800 Da
Subunit: Self-associates to form homooligomers. Interacts with the splicing regulatory proteins SFRS9, SAFB and YTHDC1.
Interacts also with HNRPL and SLM1/KHDRBS2 (By similarity). Interacts with KHDRBS1, RBMX, RBMY1A1 and with p85 subunit
of PI3-kinase. Interacts also with SIAH1 which promotes targeting for degradation
Subcellular location: Nucleus. Note=Localized in a compartment adjacent to the nucleolus, but distinct from the
peri-nucleolar one
Secondary accessions: Q6NUL8 Q9UPA8
Alternative splicing: 2 isoforms:  O75525-1   O75525-2   

Explore the universe of human proteins at neXtProt for KHDRBS3: NX_O75525

Post-translational modifications:

  • Phosphorylated on tyrosine residues. Isoform 1 C-terminal region is tyrosine-rich, but isoform 2 lacking this
  • C-terminal region is also tyrosine-phosphorylated1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O75525

  • KHDRBS3 Protein expression data from MOPED and PaxDb:    About this image 
    KHDRBS3 Protein Expression
    REFSEQ proteins: NP_006549.1  
    ENSEMBL proteins: 
     ENSP00000348108   ENSP00000431022   ENSP00000428607   ENSP00000430284   ENSP00000427851  
     ENSP00000427841   ENSP00000428643  

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    Novus Biologicals KHDRBS3 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for KHDRBS3

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005730NOT nucleolus IDA--

    KHDRBS3 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for KHDRBS3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KHDRBS3 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR004087 KH_dom

    Graphical View of Domain Structure for InterPro Entry O75525

    ProtoNet protein and cluster: O75525

    UniProtKB/Swiss-Prot: KHDR3_HUMAN, O75525
    Domain: The proline-rich site binds the SH3 domain of the p85 subunit of PI3-kinase
    Similarity: Belongs to the KHDRBS family
    Similarity: Contains 1 KH domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: KHDR3_HUMAN, O75525
    Function: RNA-binding protein that plays a role in the regulation of alternative splicing and influences mRNA splice
    site selection and exon inclusion. May play a role as a negative regulator of cell growth. Inhibits cell
    proliferation. Involved in splice site selection of vascular endothelial growth factor. Induces an increased
    concentration-dependent incorporation of exon in CD44 pre-mRNA by direct binding to purine-rich exonic enhancer.
    RNA-binding abilities are down-regulated by tyrosine kinase PTK6. Involved in post-transcriptional regulation of HIV-1
    gene expression. Binds preferentially to the 5'-[AU]UAAA-3' motif in vitro
    Induction: Induced in proteinuric diseases. Down-regulated in immortalized fibroblasts isolated after a proliferative
    crisis accompanied with massive cell death

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003723RNA binding IDA19561594
    GO:0003727single-stranded RNA binding ----
    GO:0005515protein binding IPI--
    GO:0017124SH3 domain binding IEA--
         
    KHDRBS3 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for KHDRBS3:
     Increased cell number in G1, a  Synthetic lethal with Ras 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for KHDRBS3 

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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KHDRBS3


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KHDRBS3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/47 Interacting proteins for KHDRBS3 (O755251, 2, 3 ENSP000003481084) via UniProtKB, MINT, STRING, and/or I2D (see all 47)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    LNX1Q8TBB12, 3, ENSP000002639254MINT-66718 I2D: score=5 STRING: ENSP00000263925
    RBM7Q9Y5802, 3, ENSP000003646394MINT-67619 I2D: score=5 STRING: ENSP00000364639
    SIAH1Q8IUQ42, 3, ENSP000003491564MINT-68424 I2D: score=5 STRING: ENSP00000349156
    KHDRBS2Q5VWX12, 3, ENSP000002811564MINT-67800 I2D: score=4 STRING: ENSP00000281156
    KHDRBS1Q076662, 3, ENSP000003138294MINT-8339510 I2D: score=2 STRING: ENSP00000313829
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--
    GO:0006397mRNA processing ----
    GO:0007283spermatogenesis TAS10332027
    GO:0033120positive regulation of RNA splicing ----

    KHDRBS3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    KHDRBS3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for KHDRBS3
    6 Novoseek chemical compound relationships for KHDRBS3 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    deoxypyridinoline 50.2 2 14555415 (1)
    hydroxyproline 36.5 1 9355672 (1)
    triiodothyronine 33.5 1 16541206 (1)
    calcium 8.35 3 9115154 (1), 16541206 (1), 16500882 (1)
    alanine 7.64 2 9444780 (1), 15835237 (1)
    tyrosine 0 1 10077576 (1)

    Search CenterWatch for drugs/clinical trials and news about KHDRBS3 / KHDR3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KHDRBS3 gene: 
    NM_006558.1  

    Unigene Cluster for KHDRBS3:

    KH domain containing, RNA binding, signal transduction associated 3
    Hs.444558  [show with all ESTs]
    Unigene Representative Sequence: BX537666
    12 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000355849(uc003yuv.3 uc003yuw.3 uc010mek.3) ENST00000524199
    ENST00000520981 ENST00000517394 ENST00000519600 ENST00000517859 ENST00000524282
    ENST00000522079 ENST00000522433 ENST00000518728 ENST00000521461 ENST00000522578


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    hsa-miR-520d-5p hsa-miR-376b hsa-miR-144 hsa-miR-4325 hsa-miR-204 hsa-miR-186 hsa-miR-3662 hsa-miR-31
    SwitchGear 3'UTR luciferase reporter plasmidKHDRBS3 3' UTR sequence
    Inhib. RNA
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    Additional cDNA sequence: 

    AF051321.1 AF051322.1 AF069681.1 BC032606.2 BC068536.1 BX537666.1 

    10 DOTS entries:

    DT.445615  DT.99953290  DT.100788077  DT.92444378  DT.95271104  DT.40237733  DT.95271103  DT.95074232 
    DT.95305926  DT.92444379 

    24/145 AceView cDNA sequences (see all 145):

    AI650382 AA954323 BE275166 AA907358 AF051322 BG215534 T18913 CR591014 
    BQ878314 BQ673257 BG181314 AI638608 BX103812 BQ670932 BC032606 AA456299 
    AI239592 BQ672815 BX537666 AA948596 CD244637 AF069681 AA007604 BC068536 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for KHDRBS3    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b
    SP1:                    -                 -                                             
    SP2:                    -                 -                       -                     
    SP3:                                                                    -               
    SP4:                                                                                    


    ECgene alternative splicing isoforms for KHDRBS3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KHDRBS3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CGTAAAAAGG
    KHDRBS3 Expression
    About this image

    KHDRBS3 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Nkx2-1 GFP+ cells (Efficient derivation...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See KHDRBS3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KHDRBS3

    SOURCE GeneReport for Unigene cluster: Hs.444558

    UniProtKB/Swiss-Prot: KHDR3_HUMAN, O75525
    Tissue specificity: Ubiquitous with higher expression in testis, skeletal muscle and brain. Expressed in the kidney
    only in podocytes, the glomerular epithelial cells of the kidney. Strongly expressed after meiosis

        SABiosciences Custom PCR Arrays for KHDRBS3
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KHDRBS3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for KHDRBS3 gene from 8/23 species (see all 23)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Khdrbs31 , 5 KH domain containing, RNA binding, signal transduction more1, 5 89.4(n)1
    97.11(a)1
      15 (30.36 cM)5
    139921  NM_010158.21  NP_034288.21 
     689284205 
    chicken
    (Gallus gallus)
    Aves KHDRBS31 KH domain containing, RNA binding, signal transduction more 82.07(n)
    90.99(a)
      420317  XM_001231271.2  XP_001231272.1 
    lizard
    (Anolis carolinensis)
    Reptilia KHDRBS36
    --
    84(a)
    1 ↔ 1
    4(2226136-2291836)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.113502 Transcribed sequence with moderate similarity to protein more 77.35(n)    137696087 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1005376631 KH domain-containing, RNA-binding, signal transduction-associated more 69.08(n)
    75(a)
      100537663  XM_003199259.1  XP_003199307.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG103843
    qkr58E-11
    quaking related 58E-11 62(a)
    (best of 8)3
    54.49(n)1
    53.29(a)1
      58E23
    375611  NM_079085.41  NP_523809.21 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT2G386106
    AT4G264806
    (see all 5)
    RNA-binding KH domain-containing protein
    (see all 5)
    26(a)
    24(a)
    (see all 5)
    many ↔ many
    many ↔ many
    (see all 5)
    2(16147113-16149873)
    4(13372422-13375963)
    rice
    (Oryza sativa)
    Liliopsida --
    --
    (see all 7)
    KH domain containing protein, putative, expressed
    (see all 7)
    26(a)
    26(a)
    (see all 7)
    many ↔ many
    many ↔ many
    (see all 7)
    3(34179264-34183709)
    7(7119724-7125463)


    ENSEMBL Gene Tree for KHDRBS3 (if available)
    TreeFam Gene Tree for KHDRBS3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KHDRBS3 gene
    KHDRBS22  SF12  KHDRBS12  QKI2  
    3 SIMAP similar genes for KHDRBS3 using alignment to 9 protein entries:     KHDR3_HUMAN (see all proteins):
    KHDRBS2    KHDRBS1    QKI

    KHDRBS3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2978 NCBI SNPs in KHDRBS3 are shown (see all 2978    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 8 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs561344991,2
    C--136467740(+) CTTTTT/CGTTTC 1 -- us2k14Minor allele frequency- C:0.13WA NA EA 360
    rs801616481,2
    C,F--136467786(+) GAAGAG/ACAGCC 1 -- us2k11Minor allele frequency- A:0.09WA 118
    rs1114529901,2
    --136467798(+) CAAGCC/AGCCTA 1 -- us2k13Minor allele frequency- A:0.25CSA 4
    rs737120311,2
    C--136467866(+) CTCAGC/TTGGCC 1 -- us2k11Minor allele frequency- T:0.50WA 2
    rs1122493741,2
    F--136467881(+) CGGGGC/TGAAGC 1 -- us2k12Minor allele frequency- T:0.50CSA 4
    rs1381340611,2
    --136467891(+) CACCAC/TGACCA 1 -- us2k10--------
    rs1427151001,2
    --136467999(+) GCAGCC/GGGAAA 1 -- us2k10--------
    rs1895252621,2
    --136468036(+) ATTTCC/TGATAG 1 -- us2k10--------
    rs37358651,2
    C--136468145(-) CTCAGG/CGTCCT 1 -- us2k16Minor allele frequency- C:0.13NA WA EA 364
    rs1818992921,2
    --136468181(+) GCTAGC/TGAGCA 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for KHDRBS3 (136469700 - 136668965 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 7 variations for KHDRBS3
         4 CNVs: 65274 95701 70441 38703
         3 Indels: 60733 47468 60732

    SABiosciences Cancer Mutation PCR Assays
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    DNA2.0 Custom Variant and Variant Library Synthesis for KHDRBS3

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KHDRBS3 for disorders           About GeneDecksing

    OMIM gene information: 610421    OMIM disorders: --

    20/27 diseases for KHDRBS3 (see all 27):    About MalaCards
    rocky mountain spotted fever    spotted fever    childhood absence epilepsy    absence epilepsy
    extratemporal epilepsy    osteogenesis imperfecta    transvestism    anorexia nervosa
    hypophosphatasia    macular degeneration    ulcerative colitis    osteomalacia
    osteopetrosis    rheumatoid arthritis    osteosarcoma    proteinuria
    liver cancer    osteoporosis    medulloblastoma    colon cancer

    4 diseases from the University of Copenhagen DISEASES database for KHDRBS3:
    Extratemporal epilepsy     Transvestism     Hypophosphatasia     Osteomalacia

    2 Novoseek disease relationships for KHDRBS3 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    osteosarcoma 26.3 6 12037623 (2), 15478002 (1)
    liver diseases 23 2 9355672 (1), 9148865 (1)

    Genetic Association Database (GAD): KHDRBS3
    Human Genome Epidemiology (HuGE) Navigator: KHDRBS3 (1 document)

    Export disorders for KHDRBS3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KHDRBS3 gene, integrated from 9 sources (see all 57):
    (articles sorted by number of sources associating them with KHDRBS3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. T-STAR/ETOILE: a novel relative of SAM68 that interacts with an RNA- binding protein implicated in spermatogenesis. (PubMed id 10332027)1, 2, 3 Venables J.P.... Eperon I.C. (1999)
    2. Salpalpha and Salpbeta, growth-arresting homologs of Sam68. (PubMed id 10564820)1, 2, 3 Lee J.-S. and Burr J.G. (1999)
    3. Characterization of Sam68-like mammalian proteins SLM-1 and SLM-2: SLM-1 is a Src substrate during mitosis. (PubMed id 10077576)1, 2, 9 Di Fruscio M.... Richard S. (1999)
    4. Sam68-like mammalian protein 2, identified by digital differential display as expressed by podocytes, is induced in proteinuria and involved in splice site selection of vascular endothelial growth factor. (PubMed id 15901763)1, 2, 9 Cohen C.D....Kretzler M. (2005)
    5. A role for KH domain proteins (Sam68-like mammalian proteins and quaking proteins) in the post-transcriptional regulation of HIV replication. (PubMed id 11741900)1, 2, 9 Reddy T.R.... Wong-Staal F. (2002)
    6. Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins. (PubMed id 19561594)1, 2 Ray D....Hughes T.R. (2009)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    8. SIAH1 targets the alternative splicing factor T-STAR for degradation by the proteasome. (PubMed id 15163637)1, 2 Venables J.P.... Elliott D.J. (2004)
    9. [Association of child absence epilepsy with T-STAR gene] (PubMed id 12921630)1, 4 Chen Y.C....Wu X.R. (2003)
    10. Down-regulation of T-STAR, a growth inhibitory protein, after SV40- mediated immortalization. (PubMed id 11714634)1, 2 Kool J.... Terleth C. (2001)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10656 HGNC: 18117 AceView: KHDRBS3 Ensembl:ENSG00000131773 euGenes: HUgn10656
    ECgene: KHDRBS3 H-InvDB: KHDRBS3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KHDRBS3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KHDRBS3 gene:
    Search GeneIP for patents involving KHDRBS3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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