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Aliases for KDM4A-AS1 Gene

Subcategory (RNA class) for KDM4A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KDM4A-AS1 Gene

  • KDM4A Antisense RNA 1 2 3 5
  • KDM4A Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KDM4A-AS1 Gene

Previous GeneCards Identifiers for KDM4A-AS1 Gene

  • GC01M044167

Summaries for KDM4A-AS1 Gene

GeneCards Summary for KDM4A-AS1 Gene

KDM4A-AS1 (KDM4A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KDM4A-AS1 Gene

Genomics for KDM4A-AS1 Gene

Regulatory Elements for KDM4A-AS1 Gene

Enhancers for KDM4A-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F044628 1.1 ENCODE 19.5 -923.3 -923342 6.6 HDGF PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF143 DMAP1 TOE1 KDM4A RPS8 KDM4A-AS1 C1orf228 ZSWIM5 RNU5F-1 ERI3 RNF220
GH01F043539 1.7 FANTOM5 Ensembl ENCODE 10.7 +160.7 160655 15.4 ARNT MLX ZFP64 ARID4B FEZF1 DMAP1 YY1 SLC30A9 ZNF143 DEK LOC101929592 PTPRF MED8 SZT2 ST3GAL3 KDM4A-AS1 IPO13 LOC101929609 HYI DPH2
GH01F044261 1.7 FANTOM5 Ensembl ENCODE 9.9 -555.1 -555050 4.0 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 YBX1 ZNF2 ZNF143 KLF13 DMAP1 KDM4A ERI3 KDM4A-AS1 SZT2 ATP6V0B ERI3-IT1 GC01P044290
GH01F043525 1.3 Ensembl ENCODE 11 +181.8 181797 1.0 ATF1 CREB3L1 ARID4B SIN3A ZNF48 YY1 GLIS2 ZNF766 ELK1 KLF7 ST3GAL3 KDM4A-AS1 ARTN IPO13 LOC101929609 MED8 PTPRF GC01M043545
GH01F043529 1.3 FANTOM5 ENCODE 11 +174.2 174222 8.9 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 ZNF121 GLIS2 ZNF143 KDM4A-AS1 ST3GAL3 ARTN IPO13 LOC101929609 PTPRF HYI MED8 GC01M043545
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KDM4A-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for KDM4A-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for KDM4A-AS1 Gene

43,699,724 bp from pter
43,708,138 bp from pter
8,415 bases
Minus strand

Genomic View for KDM4A-AS1 Gene

Genes around KDM4A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KDM4A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KDM4A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KDM4A-AS1 Gene

Proteins for KDM4A-AS1 Gene

Post-translational modifications for KDM4A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KDM4A-AS1 Gene

Domains & Families for KDM4A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KDM4A-AS1 Gene

Function for KDM4A-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KDM4A-AS1 Gene

Localization for KDM4A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KDM4A-AS1 Gene

Pathways & Interactions for KDM4A-AS1 Gene

SuperPathways for KDM4A-AS1 Gene

No Data Available

Interacting Proteins for KDM4A-AS1 Gene

Gene Ontology (GO) - Biological Process for KDM4A-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KDM4A-AS1 Gene

Transcripts for KDM4A-AS1 Gene

mRNA/cDNA for KDM4A-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KDM4A-AS1 Gene

KDM4A antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KDM4A-AS1 Gene

No ASD Table

Relevant External Links for KDM4A-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KDM4A-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KDM4A-AS1 Gene

SOURCE GeneReport for Unigene cluster for KDM4A-AS1 Gene:

genes like me logo Genes that share expression patterns with KDM4A-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KDM4A-AS1 Gene

Orthologs for KDM4A-AS1 Gene

Evolution for KDM4A-AS1 Gene

Gene Tree for KDM4A-AS1 (if available)
Gene Tree for KDM4A-AS1 (if available)

No data available for Orthologs for KDM4A-AS1 Gene

Paralogs for KDM4A-AS1 Gene

No data available for Paralogs for KDM4A-AS1 Gene

Variants for KDM4A-AS1 Gene

Sequence variations from dbSNP and Humsavar for KDM4A-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1057125 -- 43,705,482(+) GCATC(A/C)CCTTG intron-variant, utr-variant-3-prime
rs111780781 -- 43,701,060(+) TGCGA(C/T)TACAG intron-variant
rs112231124 -- 43,701,057(+) AGCTG(C/T)GACTA intron-variant
rs112297569 -- 43,700,550(+) TTGCT(C/T)TGTTG intron-variant, nc-transcript-variant
rs112304296 -- 43,706,719(+) ACCTC(-/AAG)AGAAC intron-variant, upstream-variant-2KB

Relevant External Links for KDM4A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KDM4A-AS1 Gene

Disorders for KDM4A-AS1 Gene

Relevant External Links for KDM4A-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for KDM4A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KDM4A-AS1 Gene

Publications for KDM4A-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for KDM4A-AS1 Gene

Sources for KDM4A-AS1 Gene

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