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Aliases for KCTD9P1 Gene

Subcategory (RNA class) for KCTD9P1 Gene


Aliases for KCTD9P1 Gene

  • Potassium Channel Tetramerization Domain Containing 9 Pseudogene 1 2 3 5
  • Potassium Channel Tetramerisation Domain Containing 9 Pseudogene 1 2 3
  • HsT38306 3

External Ids for KCTD9P1 Gene

ORGUL Members for KCTD9P1 Gene

Previous GeneCards Identifiers for KCTD9P1 Gene

  • GC17U900588
  • GC17P020017

Summaries for KCTD9P1 Gene

GeneCards Summary for KCTD9P1 Gene

KCTD9P1 (Potassium Channel Tetramerization Domain Containing 9 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for KCTD9P1 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for KCTD9P1

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for KCTD9P1 Gene

Genomics for KCTD9P1 Gene

Regulatory Elements for KCTD9P1 Gene

Enhancers for KCTD9P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F019544 1.2 FANTOM5 Ensembl 4.9 -565.8 -565824 2.4 CTCF PKNOX1 ZNF792 TAL1 INSM2 SIN3A FEZF1 RAD21 YY1 ZNF335 KCTD9P1 MAPK7 SNORA59B TRW-CCA2-1
GH17F020089 1.6 FANTOM5 Ensembl ENCODE 0.3 -20.2 -20161 4.0 PKNOX1 SIN3A FEZF1 ZNF2 ZNF48 YY1 ZNF121 GLIS2 DEK ZNF263 AKAP10 SPECC1 LOC105371579 KCTD9P1
GH17F020121 0.9 Ensembl ENCODE 0.4 +10.1 10101 1.4 CTCF ZNF654 TEAD1 TRIM22 REST RAD21 RFX5 TEAD3 KLF16 ZNF143 ENSG00000261033 LGALS9B NOS2P3 SPECC1 AKAP10 GC17M020127 KCTD9P1
GH17F020094 1 Ensembl ENCODE 0.3 -16.4 -16352 1.4 CTCF KLF1 PKNOX1 TFAP4 INSM2 KLF17 ZIC2 RAD21 ZNF121 POLR2A SPECC1 LGALS9B AKAP10 LOC105371579 KCTD9P1
GH17F020116 0.7 ENCODE 0.4 +5.1 5059 0.2 CTCF ZNF362 ZNF654 NRF1 ZNF384 REST RAD21 ZEB1 RFX5 SMC3 SPECC1 AKAP10 GC17M020127 KCTD9P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCTD9P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCTD9P1 Gene

20,111,824 bp from pter
20,112,990 bp from pter
1,167 bases
Plus strand

Genomic View for KCTD9P1 Gene

Genes around KCTD9P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCTD9P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCTD9P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCTD9P1 Gene

ORGUL Member Location for KCTD9P1 Gene

ORGUL Member Location for KCTD9P1 gene

Proteins for KCTD9P1 Gene

Post-translational modifications for KCTD9P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCTD9P1 Gene

Domains & Families for KCTD9P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCTD9P1 Gene

Function for KCTD9P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCTD9P1 Gene

Localization for KCTD9P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCTD9P1 Gene

Pathways & Interactions for KCTD9P1 Gene

SuperPathways for KCTD9P1 Gene

No Data Available

Interacting Proteins for KCTD9P1 Gene

Gene Ontology (GO) - Biological Process for KCTD9P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KCTD9P1 Gene

Transcripts for KCTD9P1 Gene

fRNAdb Secondary structures for KCTD9P1 Gene

  • FR048601

mRNA/cDNA for KCTD9P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCTD9P1 Gene

No ASD Table

Relevant External Links for KCTD9P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KCTD9P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KCTD9P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of KCTD9P1 Gene:

genes like me logo Genes that share expression patterns with KCTD9P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KCTD9P1 Gene

Orthologs for KCTD9P1 Gene

Evolution for KCTD9P1 Gene

Gene Tree for KCTD9P1 (if available)
Gene Tree for KCTD9P1 (if available)

No data available for Orthologs for KCTD9P1 Gene

Paralogs for KCTD9P1 Gene

No data available for Paralogs for KCTD9P1 Gene

Variants for KCTD9P1 Gene

Relevant External Links for KCTD9P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCTD9P1 Gene

Disorders for KCTD9P1 Gene

No disorders were found for KCTD9P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KCTD9P1 Gene

Publications for KCTD9P1 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for KCTD9P1 Gene

Sources for KCTD9P1 Gene

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