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Aliases for KCTD21-AS1 Gene

Subcategory (RNA class) for KCTD21-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for KCTD21-AS1 Gene

  • KCTD21 Antisense RNA 1 2 3

External Ids for KCTD21-AS1 Gene

Previous GeneCards Identifiers for KCTD21-AS1 Gene

  • GC11P077854

Summaries for KCTD21-AS1 Gene

GeneCards Summary for KCTD21-AS1 Gene

KCTD21-AS1 (KCTD21 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCTD21-AS1 Gene

Genomics for KCTD21-AS1 Gene

Genomic Location for KCTD21-AS1 Gene

Start:
78,139,771 bp from pter
End:
78,175,323 bp from pter
Size:
35,553 bases
Orientation:
Plus strand

Genomic View for KCTD21-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KCTD21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCTD21-AS1 Gene

No data available for Regulatory Elements for KCTD21-AS1 Gene

Proteins for KCTD21-AS1 Gene

Post-translational modifications for KCTD21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCTD21-AS1 Gene

Domains for KCTD21-AS1 Gene

Gene Families for KCTD21-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KCTD21-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCTD21-AS1 Gene

Function for KCTD21-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KCTD21-AS1 Gene

Localization for KCTD21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCTD21-AS1 Gene

Pathways for KCTD21-AS1 Gene

SuperPathways for KCTD21-AS1 Gene

No Data Available

Interacting Proteins for KCTD21-AS1 Gene

Gene Ontology (GO) - Biological Process for KCTD21-AS1 Gene

None

No data available for Pathways by source for KCTD21-AS1 Gene

Transcripts for KCTD21-AS1 Gene

mRNA/cDNA for KCTD21-AS1 Gene

(1) REFSEQ mRNAs :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KCTD21-AS1
    • Block miRNA regulation of KCTD21-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for KCTD21-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for KCTD21-AS1 Gene

    No ASD Table

    Relevant External Links for KCTD21-AS1 Gene

    GeneLoc Exon Structure for
    KCTD21-AS1
    ECgene alternative splicing isoforms for
    KCTD21-AS1

    Expression for KCTD21-AS1 Gene

    mRNA expression in normal human tissues for KCTD21-AS1 Gene

    genes like me logo Genes that share expressions with KCTD21-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for KCTD21-AS1 Gene

    Orthologs for KCTD21-AS1 Gene

    Evolution for KCTD21-AS1 Gene

    ENSEMBL:
    Gene Tree for KCTD21-AS1 (if available)
    TreeFam:
    Gene Tree for KCTD21-AS1 (if available)

    No data available for Orthologs for KCTD21-AS1 Gene

    Paralogs for KCTD21-AS1 Gene

    No data available for Paralogs for KCTD21-AS1 Gene

    Variants for KCTD21-AS1 Gene

    Sequence variations from dbSNP and Humsavar for KCTD21-AS1 Gene

    SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
    rs28461 -- 78,168,166(-) CTGCC(A/G)gccag intron-variant
    rs28545 -- 78,161,770(+) tagga(G/T)tgtga intron-variant
    rs28546 -- 78,161,805(+) gtcta(A/G)tgagg intron-variant
    rs28547 -- 78,161,830(+) cttgc(A/G)ggtgg intron-variant
    rs184546 -- 78,168,891(-) ATGAA(A/G)AAGTG intron-variant

    Relevant External Links for KCTD21-AS1 Gene

    HapMap Linkage Disequilibrium report
    KCTD21-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for KCTD21-AS1 Gene

    Disorders for KCTD21-AS1 Gene

    No disorders were found for KCTD21-AS1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for KCTD21-AS1 Gene

    Publications for KCTD21-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
    4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3

    Products for KCTD21-AS1 Gene

    Sources for KCTD21-AS1 Gene

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