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Aliases for KCTD21-AS1 Gene

Subcategory (RNA class) for KCTD21-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCTD21-AS1 Gene

  • KCTD21 Antisense RNA 1 2 3 5

External Ids for KCTD21-AS1 Gene

Previous GeneCards Identifiers for KCTD21-AS1 Gene

  • GC11P077854

Summaries for KCTD21-AS1 Gene

GeneCards Summary for KCTD21-AS1 Gene

KCTD21-AS1 (KCTD21 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCTD21-AS1 Gene

Genomics for KCTD21-AS1 Gene

Regulatory Elements for KCTD21-AS1 Gene

Promoters for KCTD21-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around KCTD21-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCTD21-AS1 Gene

Chromosome:
11
Start:
78,139,771 bp from pter
End:
78,175,323 bp from pter
Size:
35,553 bases
Orientation:
Plus strand

Genomic View for KCTD21-AS1 Gene

Genes around KCTD21-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCTD21-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCTD21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCTD21-AS1 Gene

Proteins for KCTD21-AS1 Gene

Post-translational modifications for KCTD21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCTD21-AS1 Gene

Domains & Families for KCTD21-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCTD21-AS1 Gene

Function for KCTD21-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCTD21-AS1 Gene

Localization for KCTD21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCTD21-AS1 Gene

Pathways & Interactions for KCTD21-AS1 Gene

SuperPathways for KCTD21-AS1 Gene

No Data Available

Interacting Proteins for KCTD21-AS1 Gene

Gene Ontology (GO) - Biological Process for KCTD21-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCTD21-AS1 Gene

Drugs & Compounds for KCTD21-AS1 Gene

No Compound Related Data Available

Transcripts for KCTD21-AS1 Gene

mRNA/cDNA for KCTD21-AS1 Gene

(1) REFSEQ mRNAs :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCTD21-AS1 Gene

No ASD Table

Relevant External Links for KCTD21-AS1 Gene

GeneLoc Exon Structure for
KCTD21-AS1
ECgene alternative splicing isoforms for
KCTD21-AS1

Expression for KCTD21-AS1 Gene

mRNA expression in normal human tissues for KCTD21-AS1 Gene

genes like me logo Genes that share expression patterns with KCTD21-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for KCTD21-AS1 Gene

Orthologs for KCTD21-AS1 Gene

Evolution for KCTD21-AS1 Gene

ENSEMBL:
Gene Tree for KCTD21-AS1 (if available)
TreeFam:
Gene Tree for KCTD21-AS1 (if available)

No data available for Orthologs for KCTD21-AS1 Gene

Paralogs for KCTD21-AS1 Gene

No data available for Paralogs for KCTD21-AS1 Gene

Variants for KCTD21-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCTD21-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs28461 -- 78,168,166(-) CTGCC(A/G)gccag intron-variant
rs28545 -- 78,161,770(+) tagga(G/T)tgtga intron-variant
rs28546 -- 78,161,805(+) gtcta(A/G)tgagg intron-variant
rs28547 -- 78,161,830(+) cttgc(A/G)ggtgg intron-variant
rs230665 -- 78,170,052(-) TAGGA(C/T)GCAGC intron-variant

Relevant External Links for KCTD21-AS1 Gene

HapMap Linkage Disequilibrium report
KCTD21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCTD21-AS1 Gene

Disorders for KCTD21-AS1 Gene

Relevant External Links for KCTD21-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCTD21-AS1

No disorders were found for KCTD21-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCTD21-AS1 Gene

Publications for KCTD21-AS1 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for KCTD21-AS1 Gene

Sources for KCTD21-AS1 Gene

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