Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KCNS3 Gene

protein-coding   GIFtS: 57
GCID: GC02P018059

potassium voltage-gated channel, delayed-rectifier, subfamily...

 Explore 6 diseases affiliated with
KCNS3 via our new
 Human Malady Compendium 
Biological research products
for KCNS3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Potassium Voltage-Gated Channel, Delayed-Rectifier, Subfamily S, Member
31 2
     Potassium Voltage-Gated Channel Delayed-Rectifier Protein S32
Delayed-Rectifier K(+) Channel Alpha Subunit 32 3     Potassium Voltage-Gated Channel Subfamily S Member 32
Voltage-Gated Potassium Channel Subunit Kv9.32 3     Shab-Related Delayed-Rectifier K+ Channel Alpha Subunit 32
KV9.32 5     Voltage-Gated Potassium Channel Protein Kv9.32
Kv9.31     

External Ids:    HGNC: 63021   Entrez Gene: 37902   Ensembl: ENSG000001707457   OMIM: 6038885   UniProtKB: Q9BQ313   

Export aliases for KCNS3 gene to outside databases

Previous GC identifers: GC02P017945 GC02P018026 GC02P018044 GC02P017981 GC02P017834


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KCNS3:
Voltage-gated potassium channels form the largest and most diversified class of ion channels and are present in both
excitable and nonexcitable cells. Their main functions are associated with the regulation of the resting membrane
potential and the control of the shape and frequency of action potentials. The alpha subunits are of 2 types: those
that are functional by themselves and those that are electrically silent but capable of modulating the activity of
specific functional alpha subunits. The protein encoded by this gene is not functional by itself but can form
heteromultimers with member 1 and with member 2 (and possibly other members) of the Shab-related subfamily of
potassium voltage-gated channel proteins. This gene belongs to the S subfamily of the potassium channel family.
(provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: KCNS3_HUMAN, Q9BQ31
Function: Potassium channel subunit. Modulates channel activity and reduces the ion flow (By similarity)

summary for KCNS3:
Voltage-gated potassium channels (KV) belong to the 6-TM family of potassium channel that also comprises the
Ca2+-activated Slo (actually 7-TM) and the Ca2+-activated SK subfamilies. The pore-forming alpha-subunits
contain a single pore-forming region and combine to form tetramers. Heteromeric channels can be formed
within subfamilies e.g. KV1.1 with KV1.2 and KCNQ2 with KCNQ3.

Gene Wiki entry for KCNS3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_015926.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KCNS3 gene promoter:
         AhR   RFX1   Spz1   RREB-1   Egr-1   C/EBPalpha   GATA-2   Nkx6-1   FOXJ2 (long isoform)   FOXJ2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidKCNS3 promoter sequence
   Search SABiosciences Chromatin IP Primers for KCNS3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KCNS3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2p24   Ensembl cytogenetic band:  2p24.2   HGNC cytogenetic band: 2p24

KCNS3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KCNS3 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P018059:  view genomic region     (about GC identifiers)

Start:
18,059,114 bp from pter      End:
18,542,882 bp from pter
Size:
483,769 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KCNS3_HUMAN, Q9BQ31 (See protein sequence)
Recommended Name: Potassium voltage-gated channel subfamily S member 3  
Size: 491 amino acids; 56001 Da
Subunit: Heteromultimer with KCNB1 and with KCNB2. Does not form homomultimers. Might also bind to other channel
proteins (By similarity)
Subcellular location: Cell membrane; Multi-pass membrane protein. Note=May not reach the plasma membrane but remain in
an intracellular compartment in the absence of KCNB1
Secondary accessions: D6W520 O43651 Q4ZFY1 Q96B56

Explore the universe of human proteins at neXtProt for KCNS3: NX_Q9BQ31

KCNS3 Protein expression data from MOPED and PaxDb:    About this image 
KCNS3 Protein Expression

REFSEQ proteins: NP_002243.3  
ENSEMBL proteins: 
 ENSP00000385968   ENSP00000305824   ENSP00000400098  
Reactome Protein details: Q9BQ31
Human Recombinant Protein Products for KCNS3: 
Browse Purified and Recombinant Proteins at EMD Millipore
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
Browse OriGene Protein Over-expression Lysates
OriGene Custom Protein Services for KCNS3 
GenScript Custom Purified and Recombinant Proteins Services for KCNS3
Browse Sino Biological Recombinant Proteins
Browse ProSpec Recombinant Proteins
Uscn Proteins for KCNS3

Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005737cytoplasm IDA--
GO:0005794Golgi apparatus IDA--
GO:0005886plasma membrane TAS--
GO:0008076voltage-gated potassium channel complex IEA--
GO:0043231intracellular membrane-bounded organelle IDA--

KCNS3 for ontologies           About GeneDecksing



KCNS3 Antibody Products: 
Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Browse R&D Systems for Antibodies
Browse OriGene Antibodies
OriGene Custom Antibody Services for KCNS3 
GenScript Custom Superior Antibodies Services for KCNS3
Novus Biologicals KCNS3 Antibody
Abcam antibodies for KCNS3 
Uscn Antibodies for KCNS3
Search ThermoFisher Antibodies for KCNS3

Assay Products for KCNS3: 
Browse Kits and Assays available from EMD Millipore
OriGene Custom Immunoassay Development
Browse OriGene Fluorogenic Cell Assay Kits
Browse R&D Systems for biochemical assays
GenScript Custom Assay Services for KCNS3
Browse Enzo Life Sciences for kits & assays
Uscn ELISAs and CLIAs for KCNS3


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

KCNS3 for domains           About GeneDecksing

5/7 InterPro domains/families (see all 7):
 IPR005821 Ion_trans_dom
 IPR000210 BTB/POZ-like
 IPR011333 BTB/POZ_fold
 IPR003971 K_chnl_volt-dep_Kv9
 IPR003968 K_chnl_volt-dep_Kv

Graphical View of Domain Structure for InterPro Entry Q9BQ31

ProtoNet protein and cluster: Q9BQ31

3 Blocks protein families:
IPB000210 BTB/POZ domain
IPB003091 Potassium channel signature
IPB003971 Kv9 potassium channel alpha subunit signature


UniProtKB/Swiss-Prot: KCNS3_HUMAN, Q9BQ31
Domain: The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino
acids at every third position
Similarity: Belongs to the potassium channel family. S (TC 1.A.1.2) subfamily. Kv9.3/KCNS3 sub-subfamily


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Molecular Function:

     UniProtKB/Swiss-Prot Summary: KCNS3_HUMAN, Q9BQ31
Function: Potassium channel subunit. Modulates channel activity and reduces the ion flow (By similarity)

     Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005249voltage-gated potassium channel activity ----
GO:0005251delayed rectifier potassium channel activity TAS10484328
GO:0015459potassium channel regulator activity TAS10484328
     
KCNS3 for ontologies           About GeneDecksing


Phenotypes:
     2 GenomeRNAi human phenotypes for KCNS3:
 Decreased Wnt reporter activit  Increased cell death HMECs cel 

Animal Models:
   inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for KCNS3 

miRNA
Products:
    
miRTarBase miRNAs that target KCNS3:
hsa-mir-125b (MIRT005009)

OriGene 3'-UTR Clone: KCNS3
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KCNS3
8/11 QIAGEN miScript miRNA Assays for microRNAs that regulate KCNS3 (see all 11):
hsa-miR-4324 hsa-miR-320a hsa-miR-125a-5p hsa-miR-4251 hsa-miR-320d hsa-miR-135b hsa-miR-320b hsa-miR-125b
SwitchGear 3'UTR luciferase reporter plasmidKCNS3 3' UTR sequence
Inhib. RNA
Products:
    
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KCNS3 (see all 7)
OriGene shRNA RFP: KCNS3
OriGene siRNA: KCNS3
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KCNS3
Sirion Biotech Custom design and validation of potent shRNA sequences against KCNS3 

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for KCNS3
Sirion Biotech Customized adenovirus for overexpression of KCNS3 
Sirion Biotech Customized adenovirus for potent knockdown of KCNS3

Clone
Products:
     
Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3 (see all 4)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3 (see all 2)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: KCNS3 (NM_002252)
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for KCNS3
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KCNS3 

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for KCNS3
Search LifeMap BioReagents cell lines for KCNS3
Sirion Biotech Customized stable knockdown cell line services for KCNS3 
Sirion Biotech Customized inducible knockdown cell line services for KCNS3
Sirion Biotech Customized stable overexpressing cell line services for KCNS3
Sirion Biotech Customized inducible overexpressing cell line services for KCNS3

In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KCNS3


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1Regulation of Insulin Secretion
Regulation of Insulin Secretion1.00
Regulation of Insulin Secretion by Glucagon-like Peptide-10.55
Integration of energy metabolism0.74
2Potassium Channels
Potassium Channels1.00
Voltage gated Potassium channels0.43
3Metabolism
Metabolism1.00
4Dopamine-DARPP32 Feedback onto cAMP Pathway
Dopamine-DARPP32 Feedback onto cAMP Pathway1.00
5Closing of Potassium voltage-gated channels by PKA
Closing of Potassium voltage-gated channels by PKA1.00

Pathway sources
See GeneCards unified pathways
Show all pathways

1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for KCNS3
    Dopamine-DARPP32 Feedback onto cAMP Pathway

5/8        Reactome Pathways for KCNS3 (see all 8)
    Potassium Channels
Regulation of Insulin Secretion by Glucagon-like Peptide-1
Closing of Potassium voltage-gated channels by PKA
Metabolism
Regulation of Insulin Secretion



KCNS3 for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KCNS3

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/48 Interacting proteins for KCNS3 (Q9BQ313 ENSP000003058244) via UniProtKB, MINT, STRING, and/or I2D (see all 48)
InteractantInteraction Details
GeneCardExternal ID(s)
KCNB1Q147213, ENSP000003608064I2D: score=2 STRING: ENSP00000360806
KCNA10ENSP000003587864STRING: ENSP00000358786
KCNA2ENSP000003145204STRING: ENSP00000314520
KCNA3ENSP000003587844STRING: ENSP00000358784
KCNA5ENSP000002523214STRING: ENSP00000252321
About this table

Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0006112energy reserve metabolic process TAS--
GO:0006813potassium ion transport TAS10484328
GO:0007268synaptic transmission TAS--
GO:0044281small molecule metabolic process TAS--
GO:0050796regulation of insulin secretion TAS--

KCNS3 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

KCNS3 for compounds           About GeneDecksing

Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Compounds for KCNS3 available from Tocris Bioscience    About this table
CompoundAction CAS #
AM 92016 hydrochlorideKV channel blocker[178894-81-0]
KN-93CaM kinase II inhibitor. Also K+ channel blocker (KV)[139298-40-1]
4-AminopyridineNon-selective KV channel blocker[504-24-5]
1 Novoseek chemical compound relationship for KCNS3 gene    About this table
Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
potassium 51.3 6 16914430 (1), 15714333 (1)

Search CenterWatch for drugs/clinical trials and news about KCNS3 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for KCNS3 gene: 
NM_002252.3  

Unigene Cluster for KCNS3:

Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
Hs.414489  [show with all ESTs]
Unigene Representative Sequence: AK225833
5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000403915(uc002rcv.3) ENST00000481414 ENST00000304101(uc002rcw.3)
ENST00000465292 ENST00000419802

miRNA
Products:
     
OriGene 3'-UTR Clone: KCNS3
Browse OriGene MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat KCNS3
8/11 QIAGEN miScript miRNA Assays for microRNAs that regulate KCNS3 (see all 11):
hsa-miR-4324 hsa-miR-320a hsa-miR-125a-5p hsa-miR-4251 hsa-miR-320d hsa-miR-135b hsa-miR-320b hsa-miR-125b
SwitchGear 3'UTR luciferase reporter plasmidKCNS3 3' UTR sequence
Inhib. RNA
Products:
     
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KCNS3 (see all 7)
OriGene shRNA RFP: KCNS3
OriGene siRNA: KCNS3
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KCNS3
Sirion Biotech Custom design and validation of potent shRNA sequences against KCNS3 
Clone
Products:
     
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3 (see all 4)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3 (see all 2)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: KCNS3 (NM_002252)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for KCNS3
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KCNS3 
Primer
Products:
    
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KCNS3
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat KCNS3
  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KCNS3
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KCNS3

Additional cDNA sequence: 

AF043472.1 AK075088.1 AK225833.1 AK314451.1 BC004148.2 BC004987.1 BC015947.2 

3 DOTS entries:

DT.409782  DT.95375254  DT.100700162 

24/83 AceView cDNA sequences (see all 83):

BU527170 BM761522 BU538067 BU943876 BM700454 BU558183 CR615536 AW297836 
NM_002252 CA417717 BE896067 CF264718 AI521776 BQ007800 BM799345 BG478702 
BF593242 BC004987 AA024835 BU527741 BI769999 AW732573 BC015947 BU676043 

GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

KCNS3 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GAAACTAGGA
KCNS3 Expression
About this image

KCNS3 expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

Stem Cell Differentiation: 2 LifeMap Cells 
NameCategory
PureStem™ progenitor EN13 (Embryonic Progenitor Cell)
PureStem™ progenitor RASMO12 (Embryonic Progenitor Cell)
Expression: Positive    Negative     Selective marker
Experimental details: Curated     Microarrays     In-situ hybridization

See KCNS3 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for KCNS3

SOURCE GeneReport for Unigene cluster: Hs.414489

UniProtKB/Swiss-Prot: KCNS3_HUMAN, Q9BQ31
Tissue specificity: Detected in most tissues, but not in peripheral blood lymphocytes. The highest levels of expression
are in lung

    SABiosciences Custom PCR Arrays for KCNS3
Primer
Products:
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KCNS3
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat KCNS3
QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KCNS3
QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KCNS3
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KCNS3

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for KCNS3 gene from 5/18 species (see all 18)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
chicken
(Gallus gallus)
Aves KCNS31 potassium voltage-gated channel, delayed-rectifier, more 77.39(n)
85.51(a)
  428653  XM_426211.3  XP_426211.2 
lizard
(Anolis carolinensis)
Reptilia KCNS36
--
83(a)
1 ↔ 1
1(142932831-142934315)
zebrafish
(Danio rerio)
Actinopterygii LOC5653751 similar to potassium voltage-gated channel, delayed-rectifier, more 64.02(n)
64.64(a)
  565375  NM_001128724.1  NP_001122196.1 
honey bee
(Apis mellifera)
Insecta --
--
28(a)
possible ortholog
Group13.15(957-3745)
worm
(Caenorhabditis elegans)
Secernentea exp-23 potassium channel protein 33(a)
(best of 3)
  V(6143964-6146014)   --


ENSEMBL Gene Tree for KCNS3 (if available)
TreeFam Gene Tree for KCNS3 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for KCNS3 gene
KCNG32  KCNF12  KCNB22  KCNV12  KCNG22  KCNS22  KCNB12  KCNV22  
KCNG42  KCNG12  KCNS12  
18/25 SIMAP similar genes for KCNS3 using alignment to 3 protein entries:     KCNS3_HUMAN (see all proteins) (see all similar genes):
KCNS2    KCNS1    KCNB2    KCNB1    KCNF1    KCNV2
KCNV1    KCNG1    KCNG4    KCNC2    KCND2    KCNG2
KCND1    KCND3    KCNG3    KCNC1    KCNA1    KCNA10

KCNS3 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/1008 NCBI SNPs in KCNS3 are shown (see all 1008    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 2 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs768041421,2
C,F--17833042(+) TCCCAC/TTGTGT 1 -- us2k11Minor allele frequency- T:0.05NA 120
rs1114772931,2
--17833941(+) ACTGGG/ACGCCT 1 -- us2k11Minor allele frequency- A:0.50CSA 2
rs1152127541,2
C,F--17834082(+) GAGCGC/TTCTCG 1 -- us2k11Minor allele frequency- T:0.08NA 120
rs169818711,2
--17834775(+) GCTGCT/GGGCCC 1 -- us2k11Minor allele frequency- G:0.00NA 2
rs101825151,2
C--17834889(+) CGCTCC/TAGCGG 1 -- us2k12Minor allele frequency- T:0.25NA 4
rs1999210081,2
C--17836137(-) CACCTA/CCCGCC 1 -- int10--------
rs353498811,2
C,F--17836183(+) TGGCCC/AGGAGC 1 -- int19Minor allele frequency- A:0.32NA WA CSA 251
rs67311661,2
C,F--17836378(+) TGCCCA/GGGTAA 1 -- int11Minor allele frequency- G:0.09WA 118
rs563274061,2
C,F--17837619(+) TGTGGG/AGACCC 1 -- int16Minor allele frequency- A:0.16NA WA 246
rs770692391,2
F--17837907(+) AAGCTA/GGGATT 1 -- int11Minor allele frequency- G:0.03NA 120

HapMap Linkage Disequilibrium report for KCNS3 (18059114 - 18309114 bp, first 250kb of KCNS3)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
      Database of Genomic Variants (DGV) variations for KCNS3: --
Human Gene Mutation Database (HGMD): KCNS3

SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KCNS3
DNA2.0 Custom Variant and Variant Library Synthesis for KCNS3

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

KCNS3 for disorders           About GeneDecksing

OMIM gene information: 603888    OMIM disorders: --

6 diseases for KCNS3:    About MalaCards
migraine    fainting    pharyngitis    cerebritis
hypoxia    neuronitis

Genetic Association Database (GAD): KCNS3
Human Genome Epidemiology (HuGE) Navigator: KCNS3 (3 documents)

Export disorders for KCNS3 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for KCNS3 gene, integrated from 9 sources (see all 25):
(articles sorted by number of sources associating them with KCNS3)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Electrically silent potassium channel subunits from human lens epithelium. (PubMed id 10484328)1, 2, 3 Shepard A.R. and Rae J.L. (1999)
  2. Single-nucleotide polymorphisms of the KCNS3 gene are significantly associated with airway hyperresponsiveness. (PubMed id 15714333)1, 4, 9 Hao K....Xu X. (2005)
  3. International Union of Pharmacology. LIII. Nomenclatu re and molecular relationships of voltage-gated potassium channels. (PubMed id 16382104)1, 3 Gutman G.A....Wang X. (2005)
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
  5. A high-density association screen of 155 ion transport genes for involvement with common migraine. (PubMed id 18676988)1, 9 Nyholt D.R....Palotie A. (2008)
  6. Expression of an electrically silent voltage-gated pot assium channel in the human placenta. (PubMed id 22943705)1 Fyfe G.K....Wareing M. (2012)
  7. Expression and function of K(V)2-containing channels i n human urinary bladder smooth muscle. (PubMed id 22422395)1 Hristov K.L....Petkov G.V. (2012)
  8. Stromatoxin-sensitive, heteromultimeric Kv2.1/Kv9.3 c hannels contribute to myogenic control of cerebral arterial diameter. (PubMed id 20876197)1 Zhong X.Z....Cole W.C. (2010)
  9. Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348)1 Barbe L....Andersson-Svahn H. (2008)
  10. Fluorescence measurements reveal stoichiometry of K+ channels formed by modulatory and delayed rectifier alpha-subunits. (PubMed id 15827117)1 Kerschensteiner D....Stocker M. (2005)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 3790 HGNC: 6302 AceView: KCNS3 Ensembl:ENSG00000170745 euGenes: HUgn3790
ECgene: KCNS3 H-InvDB: KCNS3

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for KCNS3 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for KCNS3 gene:
Search GeneIP for patents involving KCNS3

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section

 
 EMD Millipore Custom Antibody & Bulk Services
 EMD Millipore Preclinical / Clinical Development Services
 EMD Millipore Immunoassay Services
 EMD Millipore Target Screening & Profiling Services

  
 Browse Antibodies   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
 Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
 Browse OriGene Antibodies   OriGene shRNA RFP for KCNS3  
 OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for KCNS3   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for KCNS3  
 Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
 OriGene siRNA for KCNS3   OriGene 3'-UTR Clone for KCNS3  
 OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for KCNS3  
 Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
 Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
 Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for KCNS3   OriGene Custom Protein Services for KCNS3  
 OriGene Custom Immunoassay Development  

 
 
 QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat KCNS3
 QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KCNS3
 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KCNS3
 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat KCNS3
 QIAGEN QuantiFast Probe-based Assays in human, mouse, rat KCNS3
 QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat KCNS3
 GenScript Custom Purified and Recombinant Proteins Services for KCNS3 GenScript cDNA clones with any tag delivered in your preferred vector for KCNS3
 GenScript Custom Assay Services for KCNS3 GenScript Custom Superior Antibodies Services for KCNS3
 GenScript Custom overexpressing Cell Line Services for KCNS3 CloneReady with Over 120,000 Genes
 Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
 Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
 Custom Peptide Services
 Search for Antibodies & Assays

 Regulatory tfbs in KCNS3 promoter
 Search Chromatin IP Primers for KCNS3
 RT2 qPCR Primer Assay in human, mouse, rat KCNS3
 GNC Network for KCNS3
 SABiosciences PCR Arrays including human, mouse, rat KCNS3
 Tocris compounds for KCNS3
 Browse Sino Biological Proteins and Antibodies
 Browse Sino Biological cDNA Clones
 Antibodies/Proteins Production Services
 Rabbit Monoclonal Antibody Platform
 Bulk Purchasing
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
 Novus Tissue Slides
 KCNS3 antibodies
 Antibodies for KCNS3
 See all of Abcam's Antibodies, Kits and Proteins for KCNS3
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins




 KCNS3 Proteins, Antibodies, CLIAs, and ELISAs
 Search LifeMap BioReagents cell lines for KCNS3
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for KCNS3
 SwitchGear 3'UTR luciferase reporter plasmids for KCNS3
 SwitchGear Promoter luciferase reporter plasmids for KCNS3
 Search ThermoFisher Antibodies for KCNS3
 Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat KCNS3
 inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for KCNS3
Sirion Biotech Customized:
 stable knockdown cell line services for KCNS3
 inducible knockdown cell line services for KCNS3
 design and validation of potent shRNA sequences against KCNS3
 adenovirus for potent knockdown of KCNS3
 adenovirus for overexpression of KCNS3
 stable overexpressing cell line services for KCNS3
 inducible overexpressing cell line services for KCNS3
       
GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013 , 14 May 2013

View Random Gene

Category
VWF
(GIFTS: 73)
von Willebrand factor
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      KCNS3 gene at Home site.
hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4