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Aliases for KCNJ6-AS1 Gene

Subcategory (RNA class) for KCNJ6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCNJ6-AS1 Gene

  • KCNJ6 Antisense RNA 1 2 3 5
  • KCNJ6 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • KCNJ6-IT1 3

External Ids for KCNJ6-AS1 Gene

Previous HGNC Symbols for KCNJ6-AS1 Gene

  • KCNJ6-IT1

Previous GeneCards Identifiers for KCNJ6-AS1 Gene

  • GC21M039091

Summaries for KCNJ6-AS1 Gene

GeneCards Summary for KCNJ6-AS1 Gene

KCNJ6-AS1 (KCNJ6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNJ6-AS1 Gene

Genomics for KCNJ6-AS1 Gene

Regulatory Elements for KCNJ6-AS1 Gene

Enhancers for KCNJ6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F037562 1.9 FANTOM5 Ensembl ENCODE 17.4 +154.3 154303 5.6 HDGF PKNOX1 ARNT CREB3L1 SIN3A ARID4B ZNF2 YY1 CBX5 ZNF143 ENSG00000242553 KCNJ6-AS1 TTC3-AS1 ENSG00000224790 DYRK1A TTC3 LOC105372798 GC21M037650
GH21F037590 1.3 Ensembl ENCODE 16.7 +126.7 126660 4.0 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 ZNF121 SLC30A9 ZNF416 ENSG00000242553 KCNJ6-AS1 PIGP LOC105372798 GC21M037650
GH21F037546 1.3 Ensembl ENCODE 8.3 +172.1 172080 1.6 PKNOX1 ATF1 MLX ARID4B FEZF1 ZNF121 GATA2 KLF7 KLF13 SP3 ENSG00000242553 ENSG00000224790 KCNJ6-AS1 PIR42486 GC21M037562 PIR60123
GH21F037337 1.4 Ensembl ENCODE 4.8 +379.6 379565 5.5 PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 FOS SP3 MXD4 REST DSCR3 TTC3 DYRK1A KCNJ6-AS1 LOC105372796 GC21P037297
GH21F037533 1.1 Ensembl ENCODE 5.5 +186.2 186169 0.8 PKNOX1 CREB3L1 KLF17 YY1 GLIS2 FOS SMAD5 ZEB2 SMARCB1 SMARCA4 KCNJ6-AS1 PIGP PIR60123 GC21M037562 PIR42486
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCNJ6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCNJ6-AS1 Gene

Chromosome:
21
Start:
37,717,102 bp from pter
End:
37,719,569 bp from pter
Size:
2,468 bases
Orientation:
Minus strand

Genomic View for KCNJ6-AS1 Gene

Genes around KCNJ6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNJ6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNJ6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for KCNJ6-AS1 Gene

Proteins for KCNJ6-AS1 Gene

Post-translational modifications for KCNJ6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNJ6-AS1 Gene

Domains & Families for KCNJ6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNJ6-AS1 Gene

Function for KCNJ6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNJ6-AS1 Gene

Localization for KCNJ6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNJ6-AS1 Gene

Pathways & Interactions for KCNJ6-AS1 Gene

SuperPathways for KCNJ6-AS1 Gene

No Data Available

Interacting Proteins for KCNJ6-AS1 Gene

Gene Ontology (GO) - Biological Process for KCNJ6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNJ6-AS1 Gene

Transcripts for KCNJ6-AS1 Gene

mRNA/cDNA for KCNJ6-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNJ6-AS1 Gene

No ASD Table

Relevant External Links for KCNJ6-AS1 Gene

GeneLoc Exon Structure for
KCNJ6-AS1
ECgene alternative splicing isoforms for
KCNJ6-AS1

Expression for KCNJ6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KCNJ6-AS1 Gene

genes like me logo Genes that share expression patterns with KCNJ6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KCNJ6-AS1 Gene

Orthologs for KCNJ6-AS1 Gene

Evolution for KCNJ6-AS1 Gene

ENSEMBL:
Gene Tree for KCNJ6-AS1 (if available)
TreeFam:
Gene Tree for KCNJ6-AS1 (if available)

No data available for Orthologs for KCNJ6-AS1 Gene

Paralogs for KCNJ6-AS1 Gene

No data available for Paralogs for KCNJ6-AS1 Gene

Variants for KCNJ6-AS1 Gene

Relevant External Links for KCNJ6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNJ6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNJ6-AS1 Gene

Disorders for KCNJ6-AS1 Gene

No disorders were found for KCNJ6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KCNJ6-AS1 Gene

Publications for KCNJ6-AS1 Gene

No publications were found for KCNJ6-AS1 Gene.

Products for KCNJ6-AS1 Gene

Sources for KCNJ6-AS1 Gene

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