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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

KCNJ16 Gene

protein-coding   GIFtS: 61
GCID: GC17P068071

potassium inwardly-rectifying channel, subfamily J, member...

 Explore 4 diseases affiliated with
KCNJ16 via our new
 Human Malady Compendium 
Biological research products
for KCNJ16
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Potassium Inwardly-Rectifying Channel, Subfamily J, Member 161 2     KIR5.12 5
BIR91 2     Kir5.11
Inward Rectifier K(+) Channel Kir5.12 3     Inward Rectifier K+ Channel KIR5.12
Potassium Channel, Inwardly Rectifying Subfamily J Member 162 3     Inward Rectifier Potassium Channel 162

External Ids:    HGNC: 62621   Entrez Gene: 37732   Ensembl: ENSG000001538227   OMIM: 6057225   UniProtKB: Q9NPI93   

Export aliases for KCNJ16 gene to outside databases

Previous GC identifers: GC17P067826 GC17P071031 GC17P068535 GC17P068668 GC17P065583 GC17P063457


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KCNJ16:
Potassium channels are present in most mammalian cells, where they participate in a wide range of physiologic
responses. The protein encoded by this gene is an integral membrane protein and inward-rectifier type potassium
channel. The encoded protein, which has a greater tendency to allow potassium to flow into a cell rather than out of a
cell, can form heterodimers with two other inward-rectifier type potassium channels. It may be involved in the
regulation of fluid and pH balance. Alternatively spliced transcript variants encoding the same protein have been
found for this gene. (provided by RefSeq, Jul 2012)

UniProtKB/Swiss-Prot: IRK16_HUMAN, Q9NPI9
Function: Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into
the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium;
as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward
rectification is mainly due to the blockage of outward current by internal magnesium. KCNJ16 may be involved in the
regulation of fluid and pH balance

summary for KCNJ16:
The inward-rectifier potassium channel family (also known as 2-TM channels) include the strong
inward-rectifier channels (KIR2.x), the G-protein-activated inward-rectifier channels (KIR3.x) and the
ATP-sensitive channels (KIR6.x, which combine with sulphonylurea receptors (SUR)). Structurally, the
pore-forming subunit of KIR channels is the alpha-subunit. It contains a single pore domain between two
membrane spanning regions. Four alpha-subunits combine to form a tetramer, with the pore domain of each
subunit contributing to the structure of the central pore. Heteromeric channels can also be formed within
subfamilies, e.g. KIR3.2 with KIR3.3.

Gene Wiki entry for KCNJ16


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010783.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the KCNJ16 gene promoter:
         AP-1   FOXO3   C/EBPalpha   SRY   POU2F1   POU2F1a   FOXO3a   ARP-1   STAT3   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): KCNJ16 promoter sequence
   Search SABiosciences Chromatin IP Primers for KCNJ16

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat KCNJ16


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q24.3   Ensembl cytogenetic band:  17q24.3   HGNC cytogenetic band: 17q24.3

KCNJ16 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KCNJ16 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P068071:  view genomic region     (about GC identifiers)

Start:
68,049,570 bp from pter      End:
68,131,749 bp from pter
Size:
82,180 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: IRK16_HUMAN, Q9NPI9 (See protein sequence)
Recommended Name: Inward rectifier potassium channel 16  
Size: 418 amino acids; 47949 Da
Subunit: Seems to form heterodimer with Kir4.1/KCNJ10 or Kir2.1/KCNJ2
Subcellular location: Membrane; Multi-pass membrane protein

Explore the universe of human proteins at neXtProt for KCNJ16: NX_Q9NPI9

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9NPI9

  • KCNJ16 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001257351.1  NP_061128.1  NP_733937.1  

    ENSEMBL proteins: 
     ENSP00000465646   ENSP00000465967   ENSP00000467568   ENSP00000465295   ENSP00000466132  
     ENSP00000465163   ENSP00000283936   ENSP00000376439   ENSP00000376438  
    Reactome Protein details: Q9NPI9
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    Uscn Proteins for KCNJ16

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0008076voltage-gated potassium channel complex NAS11060447


    KCNJ16 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    KCNJ16 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR014756 Ig_E-set
     IPR013518 K_chnl_inward-rec_Kir_cyto
     IPR016449 K_chnl_inward-rec_Kir
     IPR008061 K_chnl_inward-rec_Kir5

    Graphical View of Domain Structure for InterPro Entry Q9NPI9

    ProtoNet protein and cluster: Q9NPI9

    2 Blocks protein families:
    IPB001838 Inward rectifier K+ channel superfamily signature
    IPB008061 Kir5 inward rectifier K+ channel signature


    UniProtKB/Swiss-Prot: IRK16_HUMAN, Q9NPI9
    Similarity: Belongs to the inward rectifier-type potassium channel (TC 1.A.2.1) family. KCNJ16 subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: IRK16_HUMAN, Q9NPI9
    Function: Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into
    the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium;
    as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward
    rectification is mainly due to the blockage of outward current by internal magnesium. KCNJ16 may be involved in the
    regulation of fluid and pH balance

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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005242inward rectifier potassium channel activity NAS11060447
    GO:0005515protein binding ----


    KCNJ16 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for KCNJ16:
     Decreased Wnt reporter activit  Increased G2M DNA content  Increased number of mitotic ce 

    Animal Models:
         Mouse knock-outs for KCNJ16: Kcnj16tm1Pess Kcnj16tm1Lex
         7 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Kcnj16):
     behavior/neurological  growth/size  homeostasis/metabolism  integument  nervous system 
     other  skeleton 

    KCNJ16 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Inwardly rectifying K+ channels
    Inwardly rectifying K+ channels1.00
    G protein gated Potassium channels0.81
    Activation of G protein gated Potassium channels0.81
    Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits0.81
    2Activation of GABAB receptors
    Activation of GABAB receptors1.00
    GABA receptor activation0.72
    GABA B receptor activation1.00
    3Transmission across Chemical Synapses
    Transmission across Chemical Synapses1.00
    Neuronal System0.67
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell0.72
    4Potassium Channels
    Potassium Channels1.00
    5Potassium transport channels
    Potassium transport channels1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for KCNJ16
        Potassium transporters- inward current

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for KCNJ16
        Dopamine-DARPP32 Feedback onto cAMP Pathway

    5/12        Reactome Pathways for KCNJ16 (see all 12)
        Transmission across Chemical Synapses
    G protein gated Potassium channels
    Neuronal System
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
    Inwardly rectifying K+ channels


    1         Kegg Pathway  (Kegg details for KCNJ16):
        Gastric acid secretion


    KCNJ16 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for KCNJ16

    STRING Interaction Network Preview (showing 3 interactants - click image to see more details)

    4 Interacting proteins for KCNJ16 (Q9NPI93 ENSP000002839364) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    KCNJ2P632523, ENSP000002434574I2D: score=1 STRING: ENSP00000243457
    KCNJ10P785083, ENSP000003570684I2D: score=1 STRING: ENSP00000357068
    KCNJ15Q997123, ENSP000003316984I2D: score=1 STRING: ENSP00000331698
    DLG4P783523I2D: score=1 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006813potassium ion transport NAS11060447
    GO:0007268synaptic transmission TAS--


    KCNJ16 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
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    Compounds for KCNJ16 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    Tertiapin-QSelective blocker of inward-rectifier K+ channels[252198-49-5]

    1 HMDB Compound for KCNJ16    About this table
    CompoundSynonyms CAS #PubMed Ids
    MagnesiumMagnesium (see all 2)7439-95-4--
    Search CenterWatch for drugs/clinical trials and news about KCNJ16 / IRK16 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for KCNJ16 gene (4 alternative transcripts): 
    NM_001270422.1  NM_018658.2  NM_170741.2  NM_170742.1  

    Unigene Cluster for KCNJ16:

    Potassium inwardly-rectifying channel, subfamily J, member 16
    Hs.463985  [show with all ESTs]
    Unigene Representative Sequence: NM_001270422
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000591891 ENST00000588112 ENST00000589377 ENST00000586462 ENST00000585558
    ENST00000587698 ENST00000587892 ENST00000283936(uc002jin.3) ENST00000392671(uc002jio.3 uc002jiq.3)
    ENST00000392670(uc002jip.3)

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    SwitchGear 3'UTR luciferase reporter plasmidKCNJ16 3' UTR sequence
    Inhib. RNA
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    Additional cDNA sequence: 

    AF153815.1 AF153816.1 AF153817.1 AF179353.1 AK225944.1 AK290799.1 BC033038.2 

    8 DOTS entries:

    DT.314490  DT.100747413  DT.95370381  DT.121011065  DT.121011080  DT.121011067  DT.75181134  DT.91858856 

    24/107 AceView cDNA sequences (see all 107):

    AF153817 BF197355 AW271344 AI672450 AF179353 NM_018658 AI092303 AI949950 
    AI470911 BE167251 AI363102 AI217331 AI051637 AW611744 AA748747 AI925563 
    AF153816 AF153815 NM_170742 BX092587 AI418849 AI419663 AI151022 NM_170741 

    GeneLoc Exon Structure

    5/8 Alternative Splicing Database (ASD) splice patterns (SP) for KCNJ16 (see all 8)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c · 3d ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b · 9c · 9d · 9e · 9f
    SP1:                                                        -           -                                                   
    SP2:                                -     -     -     -     -                                                               
    SP3:                                -     -     -     -     -           -           -                                       
    SP4:                                                                                                                        
    SP5:                                                        -           -           -                                       


    ECgene alternative splicing isoforms for KCNJ16

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    KCNJ16 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ACAATAAACA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    KCNJ16 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Spinal CordSpinal Floor PlateFloor Plate Cells Neural Ectoderm
    Spinal CordSpinal Floor PlateSpinal Cord
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    PureStem™ epithelial progenitor E164 (Embryonic Progenitor Cell)Intermediate Mesoderm, Kidney
    Midbrain dopaminergic-like neurons (Generation of midbra...)

    See KCNJ16 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for KCNJ16

    SOURCE GeneReport for Unigene cluster: Hs.463985

    UniProtKB/Swiss-Prot: IRK16_HUMAN, Q9NPI9
    Tissue specificity: Highly expressed in kidney, pancreas and thyroid gland

        SABiosciences Expression via Pathway-Focused PCR Array including KCNJ16: 
              Neuronal Ion Channels in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for KCNJ16 gene from 6/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves KCNJ161 potassium inwardly-rectifying channel, subfamily J, more 71.38(n)
    76.61(a)
      427812  XM_425383.1  XP_425383.1 
    lizard
    (Anolis carolinensis)
    Reptilia KCNJ166
    --
    72(a)
    1 ↔ 1
    GL343258.1(2027364-2028542)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC042221.12   -- 73.94(n)    BC042221.1 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1000014321 inward rectifier potassium channel 16-like 57.51(n)
    48.27(a)
      100001432  XM_001341392.4  XP_001341428.4 
    fruit fly
    (Drosophila melanogaster)
    Insecta Irk26
    Ir6
    (see all 3)
    Inwardly rectifying potassium channel
    (see all 3)
    31(a)
    25(a)
    (see all 3)
    many ↔ many
    many ↔ many
    (see all 3)
    3R(19339690-19345167)
    3R(18999595-19011364)
    worm
    (Caenorhabditis elegans)
    Secernentea irk-26
    irk-36
    (see all 3)
    Inward Rectifying K (potassium) channel family mem...
    Inward Rectifying K (potassium) channel family mem...
    (see all 3)
    27(a)
    26(a)
    (see all 3)
    possible ortholog
    possible ortholog
    (see all 3)
    X(702973-710006)
    X(14353239-14358995)


    ENSEMBL Gene Tree for KCNJ16 (if available)
    TreeFam Gene Tree for KCNJ16 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for KCNJ16 gene
    KCNJ42  KCNJ92  KCNJ82  KCNJ12  KCNJ152  KCNJ122  KCNJ52  KCNJ62  
    KCNJ22  KCNJ102  KCNJ142  KCNJ32  KCNJ112  
    16 SIMAP similar genes for KCNJ16 using alignment to 6 protein entries:     IRK16_HUMAN (see all proteins):
    KCNJ12    KCNJ6    kcnj12x    KCNJ18    KCNJ5    KCNJ4
    KCNJ2    KCNJ1    KCNJ9    KCNJ11    KCNJ3    KCNJ14
    KCNJ10    KCNJ8    KCNJ15    KCNJ13

    KCNJ16 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/56 NCBI SNPs in KCNJ16 are shown (see all 56    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs612969261,2
    C--68079507(+) TGTATGTAT/-  
            
    ATACA
    3 -- int11Minor allele frequency- -:0.00NA 2
    rs1383836841,2
    C,--68083076(+) ACTCTA/GTCACC 1 -- int10--------
    rs116571861,2
    C,H,--68083133(+) CTCCCA/GGGTTC 1 -- int14Minor allele frequency- G:0.12NA WA CSA 8
    rs116574721,2
    C,H,--68083164(+) CCCCCT/CGAGTA 1 -- int13Minor allele frequency- C:0.17NA WA CSA 6
    rs116539281,2
    C,H,--68083298(+) CCTGCC/TTCGGC 1 -- int16Minor allele frequency- T:0.00NA WA CSA 9
    rs1848840401,2
    --68083326(+) TTATAA/GACATT 1 -- int10--------
    rs1495399781,2
    --68083369(+) GGAAGA/TGGTAG 1 -- int10--------
    rs105242831,2
    C,--68087139(+) ACTTCTCTTA/
            
    TATGA
    3 -- int11Minor allele frequency- -:0.50CSA 2
    rs105356871,2
    C--68087140(+) CTTCT-/CTTAT 
            
    ATGAC
    3 -- int11Minor allele frequency- CTTAT:0.00NA 2
    rs616995341,2
    C--68087746(+) CACAC-/ACCACTC 1 -- int12Minor allele frequency- AC:0.00NA CSA 4

    HapMap Linkage Disequilibrium report for KCNJ16 (68049570 - 68131749 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for KCNJ16
         2 CNVs: 0211 35485

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing KCNJ16
    DNA2.0 Custom Variant and Variant Library Synthesis for KCNJ16

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    KCNJ16 for disorders           About GeneDecksing

    OMIM gene information: 605722    OMIM disorders: --

    4 diseases for KCNJ16:    About MalaCards
    pierre robin sequence    meniere's disease    menieres disease    thyroiditis

    2 diseases from the University of Copenhagen DISEASES database for KCNJ16:
    Body dysmorphic disorder     Sensorineural hearing loss
    Human Genome Epidemiology (HuGE) Navigator: KCNJ16 (2 documents)

    Export disorders for KCNJ16 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for KCNJ16 gene, integrated from 9 sources (see all 18):
    (articles sorted by number of sources associating them with KCNJ16)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Genetic and functional linkage of Kir5.1 and Kir2.1 channel subunits. (PubMed id 11240146)1, 2, 3, 9 Derst C.... Karschin A. (2001)
    2. The human inward rectifier K(+) channel subunit kir5.1 (KCNJ16) maps to chromosome 17q25 and is expressed in kidney and pancreas. (PubMed id 11060447)1, 2, 9 Liu Y.... Swanson R. (2000)
    3. International Union of Pharmacology. LIV. Nomenclatur e and molecular relationships of inwardly rectifying potassium channels. (PubMed id 16382105)1, 3 Kubo Y....Vandenberg C.A. (2005)
    4. Genome-wide association study identifies a susceptibil ity locus for thyrotoxic periodic paralysis at 17q24.3. (PubMed id 22863731)1 Cheung C.L....Kung A.W. (2012)
    5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
    6. Hundreds of variants clustered in genomic loci and bi ological pathways affect human height. (PubMed id 20881960)1 Lango Allen H....Hirschhorn J.N. (2010)
    7. Highly conserved non-coding elements on either side of SOX9 associated with Pierre Robin sequence. (PubMed id 19234473)1 Benko S....Lyonnet S. (2009)
    8. Coeliac disease associated risk variants in TNFAIP3 and REL implicate altered NF-{kappa}B signalling. (PubMed id 19240061)1 Trynka G....Wijmenga C. (2009)
    9. Rare independent mutations in renal salt handling genes contribute to blood pressure variation. (PubMed id 18391953)1 Ji W....Lifton R.P. (2008)
    10. Evidence for association of GABA(B) receptors with Kir3 channels and regulators of G protein signalling (RGS4) proteins. (PubMed id 17185339)1 Fowler C.E....Slesinger P.A. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3773 HGNC: 6262 AceView: KCNJ16 Ensembl:ENSG00000153822 euGenes: HUgn3773
    ECgene: KCNJ16 Kegg: 3773 H-InvDB: KCNJ16

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for KCNJ16 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for KCNJ16 gene:
    Search GeneIP for patents involving KCNJ16

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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     KCNJ16 Proteins, Antibodies, CLIAs, and ELISAs
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