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Aliases for KCNIP4-IT1 Gene

Subcategory (RNA class) for KCNIP4-IT1 Gene

lncRNA

Quality Score for this RNA gene is

4

Aliases for KCNIP4-IT1 Gene

  • KCNIP4 Intronic Transcript 1 2 3
  • KCNIP4 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Non Coding Transcript UM9(5) 2 3
  • Non-Coding Transcript UM9(5) 3
  • Non-Protein Coding RNA 99 2
  • NCRNA00099 3
  • UM9(5) 3
  • UM9-5 3

External Ids for KCNIP4-IT1 Gene

ORGUL Members for KCNIP4-IT1 Gene

Previous Symbols for KCNIP4-IT1 Gene

  • NCRNA00099

Summaries for KCNIP4-IT1 Gene

GeneCards Summary for KCNIP4-IT1 Gene

KCNIP4-IT1 (KCNIP4 Intronic Transcript 1) is an RNA Gene, and belongs to the lncRNA class.

fRNAdb sequence ontologies for KCNIP4-IT1 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for KCNIP4-IT1 Gene

Genomics for KCNIP4-IT1 Gene

Genomic Location for KCNIP4-IT1 Gene

Start:
21,843,341 bp from pter
End:
21,853,188 bp from pter
Size:
9,848 bases
Orientation:
Minus strand

Genomic View for KCNIP4-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KCNIP4-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNIP4-IT1 Gene

ORGUL Member Location for KCNIP4-IT1 Gene

ORGUL Member Location for KCNIP4-IT1 gene

No data available for Regulatory Elements for KCNIP4-IT1 Gene

Proteins for KCNIP4-IT1 Gene

Post-translational modifications for KCNIP4-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNIP4-IT1 Gene

Domains for KCNIP4-IT1 Gene

Gene Families for KCNIP4-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KCNIP4-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNIP4-IT1 Gene

Function for KCNIP4-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for KCNIP4-IT1 Gene

Localization for KCNIP4-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNIP4-IT1 Gene

Pathways for KCNIP4-IT1 Gene

SuperPathways for KCNIP4-IT1 Gene

No Data Available

Interacting Proteins for KCNIP4-IT1 Gene

Gene Ontology (GO) - Biological Process for KCNIP4-IT1 Gene

None

No data available for Pathways by source for KCNIP4-IT1 Gene

Transcripts for KCNIP4-IT1 Gene

mRNA/cDNA for KCNIP4-IT1 Gene

(5) Additional mRNA sequences :

Unigene Clusters for KCNIP4-IT1 Gene

KCNIP4 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KCNIP4-IT1 Gene

No ASD Table

Relevant External Links for KCNIP4-IT1 Gene

GeneLoc Exon Structure for
KCNIP4-IT1
ECgene alternative splicing isoforms for
KCNIP4-IT1

Expression for KCNIP4-IT1 Gene

SOURCE GeneReport for Unigene cluster for KCNIP4-IT1 Gene Hs.354058

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for KCNIP4-IT1 Gene

Orthologs for KCNIP4-IT1 Gene

No data available for Orthologs and Evolution for KCNIP4-IT1 Gene

Paralogs for KCNIP4-IT1 Gene

No data available for Paralogs for KCNIP4-IT1 Gene

Variants for KCNIP4-IT1 Gene

Relevant External Links for KCNIP4-IT1 Gene

HapMap Linkage Disequilibrium report
KCNIP4-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for KCNIP4-IT1 Gene

Disorders for KCNIP4-IT1 Gene

No disorders were found for KCNIP4-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for KCNIP4-IT1 Gene

Publications for KCNIP4-IT1 Gene

  1. UM 9(5)h and UM 9(5)p, human and porcine noncoding transcripts with preferential expression in the cerebellum. (PMID: 12515386) Michel U. … Isbrandt D. (RNA 2002) 2 3
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for KCNIP4-IT1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate KCNIP4-IT1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for KCNIP4-IT1
    • Block miRNA regulation of KCNIP4-IT1 using miScript Target Protectors

    Sources for KCNIP4-IT1 Gene

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