Free for academic non-profit institutions. Other users need a Commercial license

Aliases for KCNIP4-IT1 Gene

Subcategory (RNA class) for KCNIP4-IT1 Gene

lncRNA

Quality Score for this RNA gene is

9

Aliases for KCNIP4-IT1 Gene

  • KCNIP4 Intronic Transcript 1 2 3
  • KCNIP4 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Non Coding Transcript UM9(5) 2 3
  • Non-Coding Transcript UM9(5) 3
  • Non-Protein Coding RNA 99 2
  • NCRNA00099 3
  • UM9(5) 3
  • UM9-5 3

External Ids for KCNIP4-IT1 Gene

ORGUL Members for KCNIP4-IT1 Gene

Previous HGNC Symbols for KCNIP4-IT1 Gene

  • NCRNA00099

Summaries for KCNIP4-IT1 Gene

GeneCards Summary for KCNIP4-IT1 Gene

KCNIP4-IT1 (KCNIP4 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for KCNIP4-IT1 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for KCNIP4-IT1 Gene

Genomics for KCNIP4-IT1 Gene

Genomic Location for KCNIP4-IT1 Gene

Chromosome:
4
Start:
21,843,341 bp from pter
End:
21,853,188 bp from pter
Size:
9,848 bases
Orientation:
Minus strand

Genomic View for KCNIP4-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KCNIP4-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNIP4-IT1 Gene

ORGUL Member Location for KCNIP4-IT1 Gene

ORGUL Member Location for KCNIP4-IT1 gene

No data available for Regulatory Elements for KCNIP4-IT1 Gene

Proteins for KCNIP4-IT1 Gene

Post-translational modifications for KCNIP4-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNIP4-IT1 Gene

Domains & Families for KCNIP4-IT1 Gene

Gene Families for KCNIP4-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KCNIP4-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNIP4-IT1 Gene

Function for KCNIP4-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNIP4-IT1 Gene

Localization for KCNIP4-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNIP4-IT1 Gene

Pathways & Interactions for KCNIP4-IT1 Gene

SuperPathways for KCNIP4-IT1 Gene

No Data Available

Interacting Proteins for KCNIP4-IT1 Gene

Gene Ontology (GO) - Biological Process for KCNIP4-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNIP4-IT1 Gene

Drugs & Compounds for KCNIP4-IT1 Gene

No Compound Related Data Available

Transcripts for KCNIP4-IT1 Gene

mRNA/cDNA for KCNIP4-IT1 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KCNIP4-IT1 Gene

KCNIP4 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KCNIP4-IT1 Gene

No ASD Table

Relevant External Links for KCNIP4-IT1 Gene

GeneLoc Exon Structure for
KCNIP4-IT1
ECgene alternative splicing isoforms for
KCNIP4-IT1

Expression for KCNIP4-IT1 Gene

SOURCE GeneReport for Unigene cluster for KCNIP4-IT1 Gene Hs.354058

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for KCNIP4-IT1 Gene

Orthologs for KCNIP4-IT1 Gene

Evolution for KCNIP4-IT1 Gene

ENSEMBL:
Gene Tree for KCNIP4-IT1 (if available)
TreeFam:
Gene Tree for KCNIP4-IT1 (if available)

No data available for Orthologs for KCNIP4-IT1 Gene

Paralogs for KCNIP4-IT1 Gene

No data available for Paralogs for KCNIP4-IT1 Gene

Variants for KCNIP4-IT1 Gene

Relevant External Links for KCNIP4-IT1 Gene

HapMap Linkage Disequilibrium report
KCNIP4-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNIP4-IT1 Gene

Disorders for KCNIP4-IT1 Gene

Relevant External Links for KCNIP4-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCNIP4-IT1
genes like me logo Genes that share disorders with KCNIP4-IT1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNIP4-IT1 Gene

Publications for KCNIP4-IT1 Gene

  1. UM 9(5)h and UM 9(5)p, human and porcine noncoding transcripts with preferential expression in the cerebellum. (PMID: 12515386) Michel U. … Isbrandt D. (RNA 2002) 1 2 67
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 67
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for KCNIP4-IT1 Gene

Sources for KCNIP4-IT1 Gene

Back to Top

Content