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Aliases for KCNIP2-AS1 Gene

Subcategory (RNA class) for KCNIP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KCNIP2-AS1 Gene

  • KCNIP2 Antisense RNA 1 2 3 5

External Ids for KCNIP2-AS1 Gene

Previous GeneCards Identifiers for KCNIP2-AS1 Gene

  • GC10P103579

Summaries for KCNIP2-AS1 Gene

GeneCards Summary for KCNIP2-AS1 Gene

KCNIP2-AS1 (KCNIP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNIP2-AS1 Gene

Genomics for KCNIP2-AS1 Gene

Regulatory Elements for KCNIP2-AS1 Gene

Enhancers for KCNIP2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G102000 1.5 Ensembl ENCODE dbSUPER 21 +183.3 183311 4.4 HDGF PKNOX1 ZNF493 ZFP64 FEZF1 GATA2 ZNF143 ZNF207 JUNB TSHZ1 HPS6 KCNIP2-AS1 C10orf76 LDB1 ARL3 PPRC1 KCNIP2 MGEA5 NFKB2 WBP1L
GH10G102772 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +959.6 959618 11.8 FOXA2 PKNOX1 ZFP64 SIN3A YY1 ZNF121 GLIS2 GATA2 FOS ZNF263 PDCD11 SFXN2 ARL3 PPRC1 TAF5 LDB1 AS3MT INA BORCS7 CYP17A1
GH10G102009 1.4 Ensembl ENCODE dbSUPER 10.5 +190.9 190933 0.4 ELF3 TBL1XR1 WRNIP1 ARID4B ZNF2 ZSCAN9 RAD21 RFX5 SLC30A9 SCRT2 KCNIP2 C10orf76 HPS6 KCNIP2-AS1 MGEA5 FGF8 POLL DPCD ENSG00000222430
GH10G102449 1.2 ENCODE 10.9 +634.1 634113 8.0 CREB3L1 AGO1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 MEF2D GLIS1 ARL3 PDCD11 TAF5 RPARP-AS1 PPRC1 INA CALHM2 KCNIP2-AS1 MFSD13A ST13P13
GH10G101485 2.5 VISTA Ensembl ENCODE 4.5 -333.0 -333015 1.6 PKNOX1 ARNT MLX ARID4B FEZF1 ZNF2 YY1 ZNF121 ZNF143 ZNF263 RNU2-43P DPCD TLX1 POLL KCNIP2-AS1 MFSD13A GC10P101487 GC10M101454
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCNIP2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCNIP2-AS1 Gene

101,819,068 bp from pter
101,828,889 bp from pter
9,822 bases
Plus strand

Genomic View for KCNIP2-AS1 Gene

Genes around KCNIP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNIP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNIP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNIP2-AS1 Gene

Proteins for KCNIP2-AS1 Gene

Post-translational modifications for KCNIP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNIP2-AS1 Gene

Domains & Families for KCNIP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNIP2-AS1 Gene

Function for KCNIP2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNIP2-AS1 Gene

Localization for KCNIP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNIP2-AS1 Gene

Pathways & Interactions for KCNIP2-AS1 Gene

SuperPathways for KCNIP2-AS1 Gene

No Data Available

Interacting Proteins for KCNIP2-AS1 Gene

Gene Ontology (GO) - Biological Process for KCNIP2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KCNIP2-AS1 Gene

Drugs & Compounds for KCNIP2-AS1 Gene

No Compound Related Data Available

Transcripts for KCNIP2-AS1 Gene

mRNA/cDNA for KCNIP2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNIP2-AS1 Gene

No ASD Table

Relevant External Links for KCNIP2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KCNIP2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCNIP2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCNIP2-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x7.0), Heart - Left Ventricle (x6.1), Brain - Nucleus accumbens (basal ganglia) (x6.1), and Brain - Putamen (basal ganglia) (x4.4).
genes like me logo Genes that share expression patterns with KCNIP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNIP2-AS1 Gene

Orthologs for KCNIP2-AS1 Gene

Evolution for KCNIP2-AS1 Gene

Gene Tree for KCNIP2-AS1 (if available)
Gene Tree for KCNIP2-AS1 (if available)

No data available for Orthologs for KCNIP2-AS1 Gene

Paralogs for KCNIP2-AS1 Gene

No data available for Paralogs for KCNIP2-AS1 Gene

Variants for KCNIP2-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCNIP2-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000017419 -- 101,827,192(+) CTTCA(A/G)CTCCA intron-variant, downstream-variant-500B, utr-variant-3-prime
rs1000049837 -- 101,826,893(+) CTTGT(C/G)CCCCT intron-variant, utr-variant-3-prime
rs1000059290 -- 101,817,285(+) GGAAA(A/G)AGGGC intron-variant, upstream-variant-2KB
rs1000323637 -- 101,823,026(+) GGATC(A/G)CCTGA intron-variant
rs1000923422 -- 101,821,403(+) AATAG(C/T)TTATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KCNIP2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv951004 CNV deletion 24416366

Relevant External Links for KCNIP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KCNIP2-AS1 Gene

Disorders for KCNIP2-AS1 Gene

Relevant External Links for KCNIP2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for KCNIP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNIP2-AS1 Gene

Publications for KCNIP2-AS1 Gene

No publications were found for KCNIP2-AS1 Gene.

Products for KCNIP2-AS1 Gene

Sources for KCNIP2-AS1 Gene

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