Aliases for KCNG4 Gene
Aliases for KCNG4 Gene
- Potassium Voltage-Gated Channel Modifier Subfamily G Member 4 2 3 5
- Potassium Voltage-Gated Channel, Subfamily G, Member 4 2 3
- Voltage-Gated Potassium Channel Subunit Kv6.4 3 4
- Potassium Channel, Voltage Gated Modifier Subfamily G, Member 4 3
- Potassium Voltage-Gated Channel Subfamily G Member 4 3
- Voltage-Gated Potassium Channel Kv6.3 3
- KV6.3 3
- KV6.4 3
- KCNG3 4
External Ids for KCNG4 Gene
- HGNC: 19697
- Entrez Gene: 93107
- Ensembl: ENSG00000168418
- OMIM: 607603
- UniProtKB: Q8TDN1
Previous GeneCards Identifiers for KCNG4 Gene
- GC16M085222
- GC16M083994
- GC16M084035
- GC16M082813
- GC16M070009
Summaries for KCNG4 Gene
-
Voltage-gated potassium (Kv) channels represent the most complex class of voltage-gated ion channels from both functional and structural standpoints. Their diverse functions include regulating neurotransmitter release, heart rate, insulin secretion, neuronal excitability, epithelial electrolyte transport, smooth muscle contraction, and cell volume. This gene encodes a member of the potassium channel, voltage-gated, subfamily G. This member functions as a modulatory subunit. The gene has strong expression in brain. Multiple alternatively spliced variants have been found in normal and cancerous tissues. [provided by RefSeq, Jul 2008]
GeneCards Summary for KCNG4 Gene
KCNG4 (Potassium Voltage-Gated Channel Modifier Subfamily G Member 4) is a Protein Coding gene. Among its related pathways are Transmission across Chemical Synapses and Potassium Channels. Gene Ontology (GO) annotations related to this gene include ion channel activity and delayed rectifier potassium channel activity. An important paralog of this gene is KCNG1.
UniProtKB/Swiss-Prot for KCNG4 Gene
-
Potassium channel subunit that does not form functional channels by itself. Can form functional heterotetrameric channels with KCNB1; modulates the delayed rectifier voltage-gated potassium channel activation and deactivation rates of KCNB1 (PubMed:19074135).
-
Voltage-gated potassium channels (KV) belong to the 6-TM family of potassium channel that also comprises the Ca2+-activated Slo (actually 7-TM) and the Ca2+-activated SK subfamilies. The alpha-subunits contain a single pore-forming region and combine to form tetramers.
Additional gene information for KCNG4 Gene
- Monarch Initiative
- Search for KCNG4 at DataMed
- Search for KCNG4 at HumanCyc
No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNG4 Gene
Genomics for KCNG4 Gene
GeneHancer (GH) Regulatory Elements for KCNG4 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH16I084239 | Enhancer | 0.3 | Ensembl | 550.8 | +0.1 | 149 | 0.4 | CTCF | KCNG4 PIR45029 | |
GH16I084367 | Promoter/Enhancer | 1.7 | EPDnew Ensembl ENCODE dbSUPER | 10.2 | -129.8 | -129803 | 3.8 | CLOCK FOXA2 NFIB NEUROD1 SIN3A RFX5 ZNF121 ZNF143 FOS RCOR1 | ATP2C2 KCNG4 GC16P084460 | |
GH16I084266 | Enhancer | 0.9 | ENCODE | 11.9 | -26.8 | -26830 | 0.2 | PKNOX1 ATF1 MLX ARID4B ZNF76 FEZF1 ETS1 ZNF143 FOS CREM | WFDC1 KCNG4 NECAB2 GC16M084262 RNA5SP433 LOC105376777 | |
GH16I084044 | Enhancer | 0.9 | ENCODE dbSUPER | 10.4 | +195.4 | 195399 | 0.2 | SOX13 CTCF ESRRA NFATC3 ARID4B RAD21 RARA SMC3 NR2F6 ZNF444 | SLC38A8 TAF1C NECAB2 OSGIN1 ADAD2 DNAAF1 HSDL1 KCNG4 ENSG00000274677 | |
GH16I084396 | Enhancer | 0.7 | ENCODE | 10.9 | -157.0 | -157000 | 0.2 | FOXA2 SIN3A CEBPG CTBP1 GATA3 FOSL2 ZNF444 FOS TCF7L2 SMARCE1 | KCNG4 ATP2C2 GC16P084460 |
Regulatory Element Products
Genomic Locations for KCNG4 Gene
- chr16:84,218,667-84,239,750
- (GRCh38/hg38)
- Size:
- 21,084 bases
- Orientation:
- Minus strand
- chr16:84,254,741-84,273,356
- (GRCh37/hg19)
Genomic View for KCNG4 Gene
- Cytogenetic band:
-
- 16q24.1 by Ensembl
- 16q24.1 by Entrez Gene
- 16q24.1 by HGNC


RefSeq DNA sequence for KCNG4 Gene
Proteins for KCNG4 Gene
-
Protein details for KCNG4 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8TDN1-KCNG4_HUMAN
- Recommended name:
- Potassium voltage-gated channel subfamily G member 4
- Protein Accession:
- Q8TDN1
- Q96H24
Protein attributes for KCNG4 Gene
- Size:
- 519 amino acids
- Molecular mass:
- 58979 Da
- Quaternary structure:
-
- Heterotetramer with KCNB1 (PubMed:19074135).
Post-translational modifications for KCNG4 Gene
Other Protein References for KCNG4 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
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-
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No data available for DME Specific Peptides for KCNG4 Gene
Domains & Families for KCNG4 Gene
Gene Families for KCNG4 Gene
- HGNC:
- IUPHAR :
- Human Protein Atlas (HPA):
-
- Predicted membrane proteins
- Voltage-gated ion channels
Protein Domains for KCNG4 Gene
Suggested Antigen Peptide Sequences for KCNG4 Gene
Graphical View of Domain Structure for InterPro Entry
Q8TDN1UniProtKB/Swiss-Prot:
KCNG4_HUMAN :- The transmembrane segment S4 functions as voltage-sensor and is characterized by a series of positively charged amino acids at every third position. Channel opening and closing is effected by a conformation change that affects the position and orientation of the voltage-sensor paddle formed by S3 and S4 within the membrane. A transmembrane electric field that is positive inside would push the positively charged S4 segment outwards, thereby opening the pore, while a field that is negative inside would pull the S4 segment inwards and close the pore. Changes in the position and orientation of S4 are then transmitted to the activation gate formed by the inner helix bundle via the S4-S5 linker region.
- Belongs to the potassium channel family. G (TC 1.A.1.2) subfamily. Kv6.4/KCNG4 sub-subfamily.
- Domain:
-
- The transmembrane segment S4 functions as voltage-sensor and is characterized by a series of positively charged amino acids at every third position. Channel opening and closing is effected by a conformation change that affects the position and orientation of the voltage-sensor paddle formed by S3 and S4 within the membrane. A transmembrane electric field that is positive inside would push the positively charged S4 segment outwards, thereby opening the pore, while a field that is negative inside would pull the S4 segment inwards and close the pore. Changes in the position and orientation of S4 are then transmitted to the activation gate formed by the inner helix bundle via the S4-S5 linker region.
- Family:
-
- Belongs to the potassium channel family. G (TC 1.A.1.2) subfamily. Kv6.4/KCNG4 sub-subfamily.
Function for KCNG4 Gene
Molecular function for KCNG4 Gene
- UniProtKB/Swiss-Prot Function:
- Potassium channel subunit that does not form functional channels by itself. Can form functional heterotetrameric channels with KCNB1; modulates the delayed rectifier voltage-gated potassium channel activation and deactivation rates of KCNB1 (PubMed:19074135).
Phenotypes From GWAS Catalog for KCNG4 Gene
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005244 | voltage-gated ion channel activity | IEA | -- |
GO:0005249 | voltage-gated potassium channel activity | IEA | -- |
GO:0005251 | delayed rectifier potassium channel activity | IDA | 19074135 |
GO:0005267 | potassium channel activity | IEA | -- |
GO:0044325 | ion channel binding | IPI | 19074135 |
Phenotypes for KCNG4 Gene
- GenomeRNAi human phenotypes for KCNG4:
-
- Increased vaccinia virus (VACV) infection
- shRNA abundance <= 50%
- Synthetic lethal with Ras
- Resistant to vaccinia virus (VACV-A4L) infection
- Negative genetic interaction between PTEN-/- and PTEN+/+
- Increased shRNA abundance (Z-score > 2)
- Increased HPV16-GFP infection
- Decreased shRNA abundance (Z-score < -2)
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miRNA for KCNG4 Gene
- miRTarBase miRNAs that target KCNG4
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-
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- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
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-
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No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for KCNG4 Gene
Localization for KCNG4 Gene
Subcellular locations from UniProtKB/Swiss-Prot for KCNG4 Gene
- Cell membrane; Multi-pass membrane protein. Note=Has to be associated with KCNB1 or possibly another partner to get inserted in the plasma membrane. Colocalizes with KCNB1 at the plasma membrane. Remains intracellular in the absence of KCNB1 (PubMed:19074135). {ECO:0000269 PubMed:19074135}.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005886 | plasma membrane | TAS | -- |
GO:0008076 | colocalizes_with voltage-gated potassium channel complex | IDA | 19074135 |
GO:0016020 | membrane | IEA | -- |
GO:0016021 | integral component of membrane | IEA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for KCNG4 Gene
Pathways & Interactions for KCNG4 Gene
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Potassium Channels | ||
2 | Dopamine-DARPP32 Feedback onto cAMP Pathway | ||
3 | Transmission across Chemical Synapses |
.62
|
Pathways by source for KCNG4 Gene
3 Reactome pathways for KCNG4 Gene
1 Qiagen pathway for KCNG4 Gene
Interacting Proteins for KCNG4 Gene
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006810 | transport | IEA | -- |
GO:0006811 | ion transport | IEA | -- |
GO:0006813 | potassium ion transport | IEA | -- |
GO:0034765 | regulation of ion transmembrane transport | IEA | -- |
GO:0051260 | protein homooligomerization | IEA | -- |
No data available for SIGNOR curated interactions for KCNG4 Gene
Drugs & Compounds for KCNG4 Gene
Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
---|
Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs |
---|
(4) Tocris Compounds for KCNG4 Gene
Compound | Action | Cas Number |
---|---|---|
Chromanol 293B | IKs blocker. Also blocks ICFTR | 163163-23-3 |
Flupirtine maleate | KV7 channel activator | 75507-68-5 |
Kaliotoxin | KV and KCa blocker | 145199-73-1 |
MaxiPost | Potassium channel modulator; exerts subtype-specific effects | 187523-35-9 |
Transcripts for KCNG4 Gene
mRNA/cDNA for KCNG4 Gene
- (2) REFSEQ mRNAs :
- (9) Selected AceView cDNA sequences:
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
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-
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available Kcng4 gene related products
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-
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Expression for KCNG4 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Brain (Nervous System)
mRNA differential expression in normal tissues according to GTEx for KCNG4 Gene
NURSA nuclear receptor signaling pathways regulating expression of KCNG4 Gene:
KCNG4SOURCE GeneReport for Unigene cluster for KCNG4 Gene:
Hs.335877mRNA Expression by UniProt/SwissProt for KCNG4 Gene:
Q8TDN1-KCNG4_HUMANEvidence on tissue expression from TISSUES for KCNG4 Gene
- Muscle(4.3)
- Nervous system(4.3)
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No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNG4 Gene
Orthologs for KCNG4 Gene
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | KCNG4 33 34 |
|
||
cow (Bos Taurus) |
Mammalia | KCNG4 33 34 |
|
||
dog (Canis familiaris) |
Mammalia | KCNG4 33 34 |
|
||
mouse (Mus musculus) |
Mammalia | Kcng4 33 16 34 |
|
||
rat (Rattus norvegicus) |
Mammalia | Kcng4 33 |
|
||
oppossum (Monodelphis domestica) |
Mammalia | KCNG4 34 |
|
OneToOne | |
platypus (Ornithorhynchus anatinus) |
Mammalia | KCNG4 34 |
|
OneToOne | |
chicken (Gallus gallus) |
Aves | CKV6.3 34 |
|
OneToOne | |
KCNG4 33 |
|
||||
lizard (Anolis carolinensis) |
Reptilia | KCNG4 34 |
|
OneToOne | |
tropical clawed frog (Silurana tropicalis) |
Amphibia | kcng4 33 |
|
||
zebrafish (Danio rerio) |
Actinopterygii | kcng4a 33 34 |
|
||
KCNG4 (1 of 2) 34 |
|
OneToMany |
- Species where no ortholog for KCNG4 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for KCNG4 Gene
Paralogs for KCNG4 Gene
(16) SIMAP similar genes for KCNG4 Gene using alignment to 3 proteins:
Variants for KCNG4 Gene
SNP ID | Clin | Chr 16 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000012795 | -- | 84,238,881(-) | C/A | intron_variant | |
rs1000016728 | -- | 84,226,772(-) | G/A/C | intron_variant | |
rs1000106886 | -- | 84,228,495(-) | C/T | intron_variant | |
rs1000118187 | -- | 84,228,591(-) | C/T | intron_variant | |
rs1000206938 | -- | 84,240,863(-) | T/A | upstream_transcript_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2672151 | CNV | deletion | 23128226 |
esv2761930 | CNV | gain | 21179565 |
esv3639412 | CNV | loss | 21293372 |
esv3639413 | CNV | loss | 21293372 |
esv3639414 | CNV | loss | 21293372 |
esv3639415 | CNV | loss | 21293372 |
nsv1059227 | CNV | loss | 25217958 |
nsv1065790 | CNV | loss | 25217958 |
nsv1111143 | CNV | tandem duplication | 24896259 |
nsv483044 | CNV | gain | 15286789 |
nsv833309 | CNV | loss | 17160897 |
nsv833310 | CNV | loss | 17160897 |
Additional Variant Information for KCNG4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- KCNG4
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for KCNG4 Gene
Disorders for KCNG4 Gene
Additional Disease Information for KCNG4
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for KCNG4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNG4 Gene
Publications for KCNG4 Gene
- Obligatory heterotetramerization of three previously uncharacterized Kv channel alpha-subunits identified in the human genome. (PMID: 12060745) Ottschytsch N … Snyders DJ (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 4 58
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 44 58
- Mutation of histidine 105 in the T1 domain of the potassium channel Kv2.1 disrupts heteromerization with Kv6.3 and Kv6.4. (PMID: 19074135) Mederos Y Schnitzler M … Preisig-Müller R (The Journal of biological chemistry 2009) 3 4 58
- International Union of Pharmacology. LIII. Nomenclature and molecular relationships of voltage-gated potassium channels. (PMID: 16382104) Gutman GA … Wang X (Pharmacological reviews 2005) 2 3 58
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
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- genomics-online: cdna clones - Search results for available Kcng4 gene related products
- orf clones - Search results for available Kcng4 gene related products
- genomics-online: gRNA clones - Search results for available Kcng4 gene related products
- genomics-online: primer clones - Search results for available Kcng4 gene related products
- genomics-online: shRNA clones - Search results for available Kcng4 gene related products
Sources for KCNG4 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew