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Aliases for KCND3-AS1 Gene

Subcategory (RNA class) for KCND3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCND3-AS1 Gene

  • KCND3 Antisense RNA 1 2 3 5
  • KCND3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KCND3-AS1 Gene

Previous GeneCards Identifiers for KCND3-AS1 Gene

  • GC00U933167
  • GC01P112452

Summaries for KCND3-AS1 Gene

GeneCards Summary for KCND3-AS1 Gene

KCND3-AS1 (KCND3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KCND3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCND3-AS1 Gene

Genomics for KCND3-AS1 Gene

Regulatory Elements for KCND3-AS1 Gene

Enhancers for KCND3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H111731 1.9 FANTOM5 Ensembl ENCODE dbSUPER 32.3 -173.0 -172956 9 PKNOX1 FOXA2 MLX ARNT ZFP64 SIN3A ARID4B FEZF1 DMAP1 ZNF2 KCND3-AS1 FAM212B-AS1 HIGD1AP12 NRBF2P3 LOC105378910 DDX20 RAP1A FAM212B C1orf162 GC01M111722
GH01H112617 1.4 ENCODE dbSUPER 32.2 +711.0 710977 6 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ST7L LOC100421402 KCND3-AS1 LRIG2 CAPZA1 RPS15P1 LOC105378910 MOV10 ENSG00000225075 RHOC
GH01H111990 1 ENCODE 32.4 +81.9 81886 2 HDGF PKNOX1 ZNF133 SIN3A GLI4 ZNF2 ZBTB7B YY1 GLIS2 ZNF207 ST7L ENSG00000243960 DDX20 CEPT1 KCND3-AS1 DRAM2 HIGD1AP12 MOV10 LINC01750 LOC105378910
GH01H111878 0.9 ENCODE dbSUPER 11.4 -30.3 -30260 1 GTF2F1 MAZ ESRRA NR2F1 KLF17 DPF2 RFX5 FOXA1 CTBP1 MTA1 DDX20 ST7L KCND3-AS1 PIR54809 KCND3-IT1
GH01H111880 0.8 ENCODE dbSUPER 11.4 -27.8 -27768 2 SREBF1 POLR2A SIN3A HNF4A KCND3-AS1 PIR54809 KCND3-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCND3-AS1 Gene

Chromosome:
1
Start:
111,909,336 bp from pter
End:
111,910,931 bp from pter
Size:
1,596 bases
Orientation:
Plus strand

Genomic View for KCND3-AS1 Gene

Genes around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCND3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCND3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCND3-AS1 Gene

Proteins for KCND3-AS1 Gene

Post-translational modifications for KCND3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCND3-AS1 Gene

Domains & Families for KCND3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCND3-AS1 Gene

Function for KCND3-AS1 Gene

Phenotypes From GWAS Catalog for KCND3-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for KCND3-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCND3-AS1 Gene

Localization for KCND3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCND3-AS1 Gene

Pathways & Interactions for KCND3-AS1 Gene

SuperPathways for KCND3-AS1 Gene

No Data Available

Interacting Proteins for KCND3-AS1 Gene

Gene Ontology (GO) - Biological Process for KCND3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCND3-AS1 Gene

Drugs & Compounds for KCND3-AS1 Gene

No Compound Related Data Available

Transcripts for KCND3-AS1 Gene

mRNA/cDNA for KCND3-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for KCND3-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for KCND3-AS1 Gene

No ASD Table

Relevant External Links for KCND3-AS1 Gene

GeneLoc Exon Structure for
KCND3-AS1
ECgene alternative splicing isoforms for
KCND3-AS1

Expression for KCND3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCND3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCND3-AS1 Gene

This gene is overexpressed in Testis (x40.1).
genes like me logo Genes that share expression patterns with KCND3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCND3-AS1 Gene

Orthologs for KCND3-AS1 Gene

Evolution for KCND3-AS1 Gene

ENSEMBL:
Gene Tree for KCND3-AS1 (if available)
TreeFam:
Gene Tree for KCND3-AS1 (if available)

No data available for Orthologs for KCND3-AS1 Gene

Paralogs for KCND3-AS1 Gene

No data available for Paralogs for KCND3-AS1 Gene

Variants for KCND3-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCND3-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000100702 -- 111,910,545(+) AGTCC(C/G)TGGGG intron-variant
rs1000408725 -- 111,910,308(+) CCTTT(A/G)CAAAT intron-variant, nc-transcript-variant
rs1001364678 -- 111,907,813(+) TCTGT(A/G)CTAGG intron-variant, upstream-variant-2KB
rs1002902922 -- 111,909,174(+) CCCCA(A/C)AATAG intron-variant, upstream-variant-2KB
rs1002991752 -- 111,907,950(+) ATTGT(C/T)TTTCT intron-variant, upstream-variant-2KB

Relevant External Links for KCND3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCND3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCND3-AS1 Gene

Disorders for KCND3-AS1 Gene

Relevant External Links for KCND3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCND3-AS1

No disorders were found for KCND3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCND3-AS1 Gene

Publications for KCND3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for KCND3-AS1 Gene

Sources for KCND3-AS1 Gene

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