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Aliases for KCND3-AS1 Gene

Subcategory (RNA class) for KCND3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCND3-AS1 Gene

  • KCND3 Antisense RNA 1 2 3 5
  • KCND3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KCND3-AS1 Gene

Previous GeneCards Identifiers for KCND3-AS1 Gene

  • GC00U933167
  • GC01P112452

Summaries for KCND3-AS1 Gene

GeneCards Summary for KCND3-AS1 Gene

KCND3-AS1 (KCND3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCND3-AS1 Gene

Genomics for KCND3-AS1 Gene

Regulatory Elements for KCND3-AS1 Gene

Enhancers for KCND3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F111990 0.5 ENCODE 30.3 +81.9 81886 2.3 HDGF PKNOX1 ZNF133 SIN3A GLI4 ZNF2 YY1 GLIS2 ELK1 ZNF207 KCND3-AS1 HIGD1AP12 LOC105378910 LINC01750 ENSG00000243960 LOC105378906
GH01F111731 0.8 FANTOM5 Ensembl ENCODE 30.2 -173.0 -172983 9.1 PKNOX1 CREB3L1 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF2 SLC30A9 FOS KCND3-AS1 FAM212B-AS1 HIGD1AP12 NRBF2P3 LOC105378910 DDX20 RAP1A FAM212B C1orf162 GC01M111722
GH01F111445 0.2 ENCODE 30.2 -461.1 -461050 4.9 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 ENSG00000260948 KCND3-AS1 OVGP1 HIGD1AP12 NRBF2P3 DDX20 KRT18P57 RNU6-151P ENSG00000243960 UBE2FP3
GH01F111185 1.6 FANTOM5 Ensembl ENCODE 30.1 -713.6 -713600 21.3 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 DRAM2 KCND3-AS1 CEPT1 HIGD1AP12 NRBF2P3 CHI3L2 ENSG00000243960 DDX20 ENSG00000273373 DENND2D
GH01F112617 1.1 ENCODE 30.1 +711.0 710977 6.2 PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 LOC100421402 KCND3-AS1 ST7L CAPZA1 RPS15P1 LRIG2 LOC105378910 MOV10 ENSG00000225075 RHOC
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCND3-AS1 Gene

Chromosome:
1
Start:
111,909,336 bp from pter
End:
111,910,931 bp from pter
Size:
1,596 bases
Orientation:
Plus strand

Genomic View for KCND3-AS1 Gene

Genes around KCND3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCND3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCND3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCND3-AS1 Gene

Proteins for KCND3-AS1 Gene

Post-translational modifications for KCND3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCND3-AS1 Gene

Domains & Families for KCND3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCND3-AS1 Gene

Function for KCND3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCND3-AS1 Gene

Localization for KCND3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCND3-AS1 Gene

Pathways & Interactions for KCND3-AS1 Gene

SuperPathways for KCND3-AS1 Gene

No Data Available

Interacting Proteins for KCND3-AS1 Gene

Gene Ontology (GO) - Biological Process for KCND3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCND3-AS1 Gene

Transcripts for KCND3-AS1 Gene

mRNA/cDNA for KCND3-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCND3-AS1 Gene

No ASD Table

Relevant External Links for KCND3-AS1 Gene

GeneLoc Exon Structure for
KCND3-AS1
ECgene alternative splicing isoforms for
KCND3-AS1

Expression for KCND3-AS1 Gene

mRNA expression in normal human tissues for KCND3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCND3-AS1 Gene

This gene is overexpressed in Testis (x40.1).
genes like me logo Genes that share expression patterns with KCND3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KCND3-AS1 Gene

Orthologs for KCND3-AS1 Gene

Evolution for KCND3-AS1 Gene

ENSEMBL:
Gene Tree for KCND3-AS1 (if available)
TreeFam:
Gene Tree for KCND3-AS1 (if available)

No data available for Orthologs for KCND3-AS1 Gene

Paralogs for KCND3-AS1 Gene

No data available for Paralogs for KCND3-AS1 Gene

Variants for KCND3-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCND3-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1036959 -- 111,908,512(-) gttac(A/G)aataa intron-variant, upstream-variant-2KB
rs112667797 -- 111,910,115(+) TTTCT(C/T)GCGCT intron-variant
rs114016679 -- 111,908,847(+) AGGAG(C/G)GGGGC intron-variant, upstream-variant-2KB
rs114109985 -- 111,910,733(+) GAGAT(G/T)GGACC intron-variant
rs114186136 -- 111,908,204(+) TCTGG(A/C)AAGCA intron-variant, upstream-variant-2KB

Relevant External Links for KCND3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCND3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCND3-AS1 Gene

Disorders for KCND3-AS1 Gene

Relevant External Links for KCND3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCND3-AS1

No disorders were found for KCND3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCND3-AS1 Gene

Publications for KCND3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for KCND3-AS1 Gene

Sources for KCND3-AS1 Gene

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