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Aliases for KCNC4-AS1 Gene

Subcategory (RNA class) for KCNC4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for KCNC4-AS1 Gene

  • KCNC4 Antisense RNA 1 (Head To Head) 2 3 5
  • KCNC4 Antisense RNA 1 (Non-Protein Coding) 2
  • KCNC4 Antisense RNA 1 2

External Ids for KCNC4-AS1 Gene

Previous GeneCards Identifiers for KCNC4-AS1 Gene

  • GC00U932965
  • GC01M110752

Summaries for KCNC4-AS1 Gene

GeneCards Summary for KCNC4-AS1 Gene

KCNC4-AS1 (KCNC4 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNC4-AS1 Gene

Genomics for KCNC4-AS1 Gene

Regulatory Elements for KCNC4-AS1 Gene

Enhancers for KCNC4-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F110421 1.8 FANTOM5 Ensembl ENCODE 10 -211.4 -211437 0.4 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 CBX5 PROK1 ENSG00000258634 CD53 LOC440600 RBM15 KCNC4 KCNC4-AS1 KCNA10 GC01M110420
GH01F110312 1.1 Ensembl ENCODE 12.2 -102.8 -102825 0.8 WRNIP1 ZNF2 RAD21 ZNF366 ZNF143 ZNF654 REST KLF16 GLIS1 ZNF524 LOC440600 PROK1 RBM15 KCNC4 KCNC4-AS1 ENSG00000200536 ENSG00000235526 LOC105378897 ENSG00000258634 UBL4B
GH01F110234 1.1 Ensembl ENCODE 12.1 -25.8 -25758 2.3 ATF1 INSM2 FEZF1 ZNF2 RFX5 ZNF366 FOS CREM EGR2 JUNB PROK1 LOC440600 KCNC4 KCNC4-AS1 ENSG00000235526 LOC105378897 ENSG00000200536 RBM15 UBL4B KCNA10
GH01F110239 1.1 Ensembl ENCODE 12.1 -30.1 -30114 1.4 HDGF CTCF ESRRA EBF1 RAD21 POLR2A ZNF366 ZNF143 SMC3 ETV6 KCNC4 KCNC4-AS1 CEPT1 ENSG00000235526 LOC105378897 ENSG00000200536 ENSG00000258634 PROK1 UBL4B LOC440600
GH01F110476 1.2 Ensembl ENCODE 11 -267.5 -267503 2.2 TBP HDAC1 INSM2 KLF17 ZEB1 RFX5 GATA2 ZNF366 FOS SMARCC1 PROK1 KCNA10 KCNC4 KCNC4-AS1 CYMP LOC105378899
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCNC4-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for KCNC4-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000670729 -1213 3201 HDGF ATF1 PKNOX1 GLI4 ZNF2 GLIS2 FOS ZNF263 SP3 SP5

Genomic Location for KCNC4-AS1 Gene

110,208,450 bp from pter
110,209,987 bp from pter
1,538 bases
Minus strand

Genomic View for KCNC4-AS1 Gene

Genes around KCNC4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNC4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNC4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNC4-AS1 Gene

Proteins for KCNC4-AS1 Gene

Post-translational modifications for KCNC4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNC4-AS1 Gene

Domains & Families for KCNC4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNC4-AS1 Gene

Function for KCNC4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNC4-AS1 Gene

Localization for KCNC4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNC4-AS1 Gene

Pathways & Interactions for KCNC4-AS1 Gene

SuperPathways for KCNC4-AS1 Gene

No Data Available

Interacting Proteins for KCNC4-AS1 Gene

Gene Ontology (GO) - Biological Process for KCNC4-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for KCNC4-AS1 Gene

Transcripts for KCNC4-AS1 Gene

mRNA/cDNA for KCNC4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KCNC4-AS1 Gene

No ASD Table

Relevant External Links for KCNC4-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for KCNC4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for KCNC4-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for KCNC4-AS1 Gene

This gene is overexpressed in Testis (x7.6) and Kidney - Cortex (x4.1).
genes like me logo Genes that share expression patterns with KCNC4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for KCNC4-AS1 Gene

Orthologs for KCNC4-AS1 Gene

Evolution for KCNC4-AS1 Gene

Gene Tree for KCNC4-AS1 (if available)
Gene Tree for KCNC4-AS1 (if available)

No data available for Orthologs for KCNC4-AS1 Gene

Paralogs for KCNC4-AS1 Gene

No data available for Paralogs for KCNC4-AS1 Gene

Variants for KCNC4-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCNC4-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs111937628 -- 110,210,227(+) GTCGG(A/G)TCGGC upstream-variant-2KB
rs113402589 -- 110,211,462(+) GAGGG(A/C/T)AGCGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs114175093 -- 110,209,228(+) AACCC(A/C)ATGGG intron-variant, upstream-variant-2KB
rs114915950 -- 110,211,430(+) GTCTG(A/T)CGCTG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs115410729 -- 110,209,091(+) ACTGC(C/T)TGATC nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for KCNC4-AS1 Gene

Variant ID Type Subtype PubMed ID
esv991777 CNV deletion 20482838

Relevant External Links for KCNC4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KCNC4-AS1 Gene

Disorders for KCNC4-AS1 Gene

Relevant External Links for KCNC4-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for KCNC4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNC4-AS1 Gene

Publications for KCNC4-AS1 Gene

No publications were found for KCNC4-AS1 Gene.

Products for KCNC4-AS1 Gene

Sources for KCNC4-AS1 Gene

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