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Aliases for KCNAB1-AS2 Gene

Subcategory (RNA class) for KCNAB1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCNAB1-AS2 Gene

  • KCNAB1 Antisense RNA 2 2 3 5
  • KCNAB1 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for KCNAB1-AS2 Gene

Previous GeneCards Identifiers for KCNAB1-AS2 Gene

  • GC00U933601
  • GC03M155934

Summaries for KCNAB1-AS2 Gene

GeneCards Summary for KCNAB1-AS2 Gene

KCNAB1-AS2 (KCNAB1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNAB1-AS2 Gene

Genomics for KCNAB1-AS2 Gene

Regulatory Elements for KCNAB1-AS2 Gene

Enhancers for KCNAB1-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G156291 0.7 Ensembl 10.6 -63.8 -63845 0.7 MXI1 RNF2 SUZ12 GFI1B RBBP5 HDAC2 SMARCA4 ZNF341 CTBP2 PRDM10 KCNAB1-AS2 KCNAB1-AS1 GC03P156231 GC03M156332
GH03G156416 0.7 ENCODE 9.8 -189.8 -189849 2.9 CTCF PKNOX1 FOXA2 DPF2 RAD21 ZNF507 FOXA1 JUND POLR2A SMARCA4 KCNAB1-AS1 KCNAB1-AS2 TIPARP-AS1 GC03M156332
GH03G156323 0.6 FANTOM5 10.4 -95.8 -95763 0.2 RFX1 CEBPA CEBPB CEBPG EP300 KCNAB1-AS2 KCNAB1-AS1 GC03M156332 GC03P156231
GH03G156300 0.5 Ensembl 10 -73.5 -73480 0.9 MAX MYC PRDM1 KCNAB1-AS2 GC03P156231 GC03M156332
GH03G156307 0.5 ENCODE 9.7 -80.0 -80024 0.2 JUND GATA2 JUN FOS KCNAB1-AS2 GC03M156332 GC03P156231
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCNAB1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCNAB1-AS2 Gene

Chromosome:
3
Start:
156,215,560 bp from pter
End:
156,227,883 bp from pter
Size:
12,324 bases
Orientation:
Minus strand

Genomic View for KCNAB1-AS2 Gene

Genes around KCNAB1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNAB1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNAB1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNAB1-AS2 Gene

Proteins for KCNAB1-AS2 Gene

Post-translational modifications for KCNAB1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNAB1-AS2 Gene

Domains & Families for KCNAB1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNAB1-AS2 Gene

Function for KCNAB1-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNAB1-AS2 Gene

Localization for KCNAB1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNAB1-AS2 Gene

Pathways & Interactions for KCNAB1-AS2 Gene

SuperPathways for KCNAB1-AS2 Gene

No Data Available

Interacting Proteins for KCNAB1-AS2 Gene

Gene Ontology (GO) - Biological Process for KCNAB1-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNAB1-AS2 Gene

Drugs & Compounds for KCNAB1-AS2 Gene

No Compound Related Data Available

Transcripts for KCNAB1-AS2 Gene

mRNA/cDNA for KCNAB1-AS2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KCNAB1-AS2 Gene

KCNAB1 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KCNAB1-AS2 Gene

No ASD Table

Relevant External Links for KCNAB1-AS2 Gene

GeneLoc Exon Structure for
KCNAB1-AS2
ECgene alternative splicing isoforms for
KCNAB1-AS2

Expression for KCNAB1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCNAB1-AS2 Gene

SOURCE GeneReport for Unigene cluster for KCNAB1-AS2 Gene:

Hs.603823
genes like me logo Genes that share expression patterns with KCNAB1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNAB1-AS2 Gene

Orthologs for KCNAB1-AS2 Gene

Evolution for KCNAB1-AS2 Gene

ENSEMBL:
Gene Tree for KCNAB1-AS2 (if available)
TreeFam:
Gene Tree for KCNAB1-AS2 (if available)

No data available for Orthologs for KCNAB1-AS2 Gene

Paralogs for KCNAB1-AS2 Gene

No data available for Paralogs for KCNAB1-AS2 Gene

Variants for KCNAB1-AS2 Gene

Sequence variations from dbSNP and Humsavar for KCNAB1-AS2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000097025 -- 156,219,989(+) TGTGA(C/T)AGTTT intron-variant
rs1000149598 -- 156,219,617(+) GTGGG(A/G)AATTA intron-variant
rs1000464480 -- 156,224,421(+) GTGGG(C/T)GCCAA intron-variant
rs1000674980 -- 156,226,387(+) TCTAT(C/T)TCTCA intron-variant
rs1000876448 -- 156,220,539(+) TCATA(C/T)CCTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KCNAB1-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv592085 CNV gain 21841781

Relevant External Links for KCNAB1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNAB1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for KCNAB1-AS2 Gene

Disorders for KCNAB1-AS2 Gene

Relevant External Links for KCNAB1-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCNAB1-AS2

No disorders were found for KCNAB1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNAB1-AS2 Gene

Publications for KCNAB1-AS2 Gene

No publications were found for KCNAB1-AS2 Gene.

Products for KCNAB1-AS2 Gene

Sources for KCNAB1-AS2 Gene

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