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Aliases for KCNAB1-AS1 Gene

Subcategory (RNA class) for KCNAB1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCNAB1-AS1 Gene

  • KCNAB1 Antisense RNA 1 2 3 5
  • KCNAB1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KCNAB1-AS1 Gene

Previous GeneCards Identifiers for KCNAB1-AS1 Gene

  • GC00U933014
  • GC03M156159

Summaries for KCNAB1-AS1 Gene

GeneCards Summary for KCNAB1-AS1 Gene

KCNAB1-AS1 (KCNAB1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNAB1-AS1 Gene

Genomics for KCNAB1-AS1 Gene

Regulatory Elements for KCNAB1-AS1 Gene

Enhancers for KCNAB1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G156482 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -37.1 -37119 2.9 HDGF PKNOX1 ATF1 SIN3A ZBTB40 TCF12 GATA2 EGR1 FOS RELB KCNAB1-AS1 SSR3 KCNAB1 TIPARP LEKR1 GC03P156486 GC03M156457
GH03G157085 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.2 -641.8 -641789 6.2 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 CCNL1 TIPARP-AS1 TIPARP ENSG00000241770 KRT18P34 SSR3 KCNAB1-AS1 LINC00881 LINC02029
GH03G157077 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -630.8 -630817 1.4 ELF3 FOXA2 ATF1 DMAP1 RAD21 ZNF48 RARA CREM MIXL1 CAVIN1 TIPARP TIPARP-AS1 KCNAB1-AS1 SSR3 LINC00886 PQLC2L LINC02029 RN7SKP177
GH03G157081 1.5 Ensembl ENCODE dbSUPER 10.7 -635.6 -635569 2.9 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 GLIS2 GATA2 LINC02029 TIPARP TIPARP-AS1 KCNAB1-AS1 SSR3 LINC00881
GH03G156495 0.9 ENCODE dbSUPER 11.7 -50.3 -50280 2.9 ZNF316 CBX3 CBX5 TRIM24 EP300 MAFK TRIM28 SETDB1 KCNAB1-AS1 KCNAB1 GC03P156486 ENSG00000272990
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KCNAB1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for KCNAB1-AS1 Gene

Chromosome:
3
Start:
156,441,157 bp from pter
End:
156,446,905 bp from pter
Size:
5,749 bases
Orientation:
Minus strand

Genomic View for KCNAB1-AS1 Gene

Genes around KCNAB1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNAB1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNAB1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNAB1-AS1 Gene

Proteins for KCNAB1-AS1 Gene

Post-translational modifications for KCNAB1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNAB1-AS1 Gene

Domains & Families for KCNAB1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNAB1-AS1 Gene

Function for KCNAB1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNAB1-AS1 Gene

Localization for KCNAB1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KCNAB1-AS1 Gene

Pathways & Interactions for KCNAB1-AS1 Gene

SuperPathways for KCNAB1-AS1 Gene

No Data Available

Interacting Proteins for KCNAB1-AS1 Gene

Gene Ontology (GO) - Biological Process for KCNAB1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNAB1-AS1 Gene

Drugs & Compounds for KCNAB1-AS1 Gene

No Compound Related Data Available

Transcripts for KCNAB1-AS1 Gene

mRNA/cDNA for KCNAB1-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KCNAB1-AS1 Gene

KCNAB1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KCNAB1-AS1 Gene

No ASD Table

Relevant External Links for KCNAB1-AS1 Gene

GeneLoc Exon Structure for
KCNAB1-AS1
ECgene alternative splicing isoforms for
KCNAB1-AS1

Expression for KCNAB1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCNAB1-AS1 Gene

SOURCE GeneReport for Unigene cluster for KCNAB1-AS1 Gene:

Hs.131282
genes like me logo Genes that share expression patterns with KCNAB1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNAB1-AS1 Gene

Orthologs for KCNAB1-AS1 Gene

Evolution for KCNAB1-AS1 Gene

ENSEMBL:
Gene Tree for KCNAB1-AS1 (if available)
TreeFam:
Gene Tree for KCNAB1-AS1 (if available)

No data available for Orthologs for KCNAB1-AS1 Gene

Paralogs for KCNAB1-AS1 Gene

No data available for Paralogs for KCNAB1-AS1 Gene

Variants for KCNAB1-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCNAB1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000569357 -- 156,442,558(+) ACATC(-/T)CTATA intron-variant
rs1000637944 -- 156,444,061(+) GGCTA(A/G)AAGCC intron-variant
rs1000907858 -- 156,447,729(+) CATAC(A/C)ATTAA intron-variant, upstream-variant-2KB
rs1001258161 -- 156,447,442(+) ACTCA(A/G)TAAAT intron-variant, upstream-variant-2KB
rs1001419584 -- 156,441,767(+) GAAAC(C/T)TTATT intron-variant

Relevant External Links for KCNAB1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNAB1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNAB1-AS1 Gene

Disorders for KCNAB1-AS1 Gene

Relevant External Links for KCNAB1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KCNAB1-AS1

No disorders were found for KCNAB1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNAB1-AS1 Gene

Publications for KCNAB1-AS1 Gene

No publications were found for KCNAB1-AS1 Gene.

Products for KCNAB1-AS1 Gene

Sources for KCNAB1-AS1 Gene

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