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Aliases for KCNAB1-AS1 Gene

Subcategory (RNA class) for KCNAB1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KCNAB1-AS1 Gene

  • KCNAB1 Antisense RNA 1 2 3 5
  • KCNAB1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for KCNAB1-AS1 Gene

Previous GeneCards Identifiers for KCNAB1-AS1 Gene

  • GC00U933014
  • GC03M156159

Summaries for KCNAB1-AS1 Gene

GeneCards Summary for KCNAB1-AS1 Gene

KCNAB1-AS1 (KCNAB1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KCNAB1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KCNAB1-AS1 Gene

Genomics for KCNAB1-AS1 Gene

GeneHancer (GH) Regulatory Elements for KCNAB1-AS1 Gene

Promoters and enhancers for KCNAB1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I157085 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 10.2 -641.8 -641788 6.2 HDGF PKNOX1 FOXA2 SMAD1 ARNT MLX ARID4B SIN3A FEZF1 DMAP1 LINC00881 CCNL1 TIPARP-AS1 TIPARP ENSG00000241770 KRT18P34 SSR3 KCNAB1-AS1 LINC02029 LINC00880
GH03I156482 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -37.1 -37119 2.9 HDGF PKNOX1 ATF1 TAF9B ZBTB40 BATF IRF4 TCF12 EGR1 ARID2 KCNAB1-AS1 SSR3 KCNAB1 TIPARP LEKR1 GC03P156486 GC03M156457
GH03I157081 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.7 -635.6 -635568 2.9 HDGF ATF1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 GLIS2 LINC02029 TIPARP TIPARP-AS1 KCNAB1-AS1 SSR3 LINC00881 LINC00880
GH03I157077 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -630.8 -630816 1.4 CTCF CREB1 EBF1 DMAP1 PRDM10 RAD21 ZNF48 ZNF83 TIPARP TIPARP-AS1 KCNAB1-AS1 SSR3 LINC00886 PQLC2L LINC02029 RN7SKP177
GH03I156291 Promoter/Enhancer 1.1 EPDnew Ensembl 10.5 +155.2 155178 0.7 MXI1 SUZ12 GFI1B MZF1 POLR2A ZNF341 CTBP2 PRDM10 EZH2 KCNAB1 KCNAB1-AS2 KCNAB1-AS1 GC03P156231 GC03M156332
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KCNAB1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KCNAB1-AS1 Gene

Genomic Locations for KCNAB1-AS1 Gene
chr3:156,441,157-156,446,905
(GRCh38/hg38)
Size:
5,749 bases
Orientation:
Minus strand
chr3:156,158,946-156,164,694
(GRCh37/hg19)

Genomic View for KCNAB1-AS1 Gene

Genes around KCNAB1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KCNAB1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KCNAB1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KCNAB1-AS1 Gene

Proteins for KCNAB1-AS1 Gene

Post-translational modifications for KCNAB1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KCNAB1-AS1 Gene

Domains & Families for KCNAB1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KCNAB1-AS1 Gene

Function for KCNAB1-AS1 Gene

Phenotypes From GWAS Catalog for KCNAB1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KCNAB1-AS1 Gene

Localization for KCNAB1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KCNAB1-AS1 Gene

Pathways & Interactions for KCNAB1-AS1 Gene

SuperPathways for KCNAB1-AS1 Gene

No Data Available

Interacting Proteins for KCNAB1-AS1 Gene

Gene Ontology (GO) - Biological Process for KCNAB1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KCNAB1-AS1 Gene

Drugs & Compounds for KCNAB1-AS1 Gene

No Compound Related Data Available

Transcripts for KCNAB1-AS1 Gene

mRNA/cDNA for KCNAB1-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for KCNAB1-AS1 Gene

KCNAB1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for KCNAB1-AS1 Gene

No ASD Table

Relevant External Links for KCNAB1-AS1 Gene

GeneLoc Exon Structure for
KCNAB1-AS1
ECgene alternative splicing isoforms for
KCNAB1-AS1

Expression for KCNAB1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KCNAB1-AS1 Gene

SOURCE GeneReport for Unigene cluster for KCNAB1-AS1 Gene:

Hs.131282
genes like me logo Genes that share expression patterns with KCNAB1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KCNAB1-AS1 Gene

Orthologs for KCNAB1-AS1 Gene

Evolution for KCNAB1-AS1 Gene

ENSEMBL:
Gene Tree for KCNAB1-AS1 (if available)
TreeFam:
Gene Tree for KCNAB1-AS1 (if available)

No data available for Orthologs for KCNAB1-AS1 Gene

Paralogs for KCNAB1-AS1 Gene

No data available for Paralogs for KCNAB1-AS1 Gene

Variants for KCNAB1-AS1 Gene

Sequence variations from dbSNP and Humsavar for KCNAB1-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000569357 -- 156,442,558(-) T/ intron_variant
rs1000637944 -- 156,444,061(-) G/A intron_variant
rs1000907858 -- 156,447,729(-) A/C upstream_transcript_variant
rs1001258161 -- 156,447,442(-) A/G upstream_transcript_variant
rs1001419584 -- 156,441,767(-) T/C intron_variant

Additional Variant Information for KCNAB1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KCNAB1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KCNAB1-AS1 Gene

Disorders for KCNAB1-AS1 Gene

Additional Disease Information for KCNAB1-AS1

No disorders were found for KCNAB1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KCNAB1-AS1 Gene

Publications for KCNAB1-AS1 Gene

No publications were found for KCNAB1-AS1 Gene.

Products for KCNAB1-AS1 Gene

Sources for KCNAB1-AS1 Gene

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