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Aliases for KBTBD11-OT1 Gene

Subcategory (RNA class) for KBTBD11-OT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KBTBD11-OT1 Gene

  • KBTBD11 Overlapping Transcript 1 2 3 5
  • KBTBD11 Overlapping Transcript 1 (Non-Protein Coding) 2

External Ids for KBTBD11-OT1 Gene

Previous GeneCards Identifiers for KBTBD11-OT1 Gene

  • GC00U934388

Summaries for KBTBD11-OT1 Gene

GeneCards Summary for KBTBD11-OT1 Gene

KBTBD11-OT1 (KBTBD11 Overlapping Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KBTBD11-OT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KBTBD11-OT1 Gene

Genomics for KBTBD11-OT1 Gene

Regulatory Elements for KBTBD11-OT1 Gene

Enhancers for KBTBD11-OT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H001877 0.5 dbSUPER 5.3 -90.6 -90612 6.5 ZNF639 GLIS1 PRDM10 KDM1A ZIC2 KBTBD11-OT1 GC08P001908 ARHGEF10
GH08H001971 0.7 dbSUPER 0.7 +0.1 64 0.6 FEZF1 ZEB2 ZBTB8A ZNF843 OSR2 PRDM6 ZNF366 KLF16 ZNF341 FOXP2 KBTBD11 KBTBD11-OT1 LOC101928058
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KBTBD11-OT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KBTBD11-OT1 Gene

Genomic Locations for KBTBD11-OT1 Gene
chr8:1,971,397-1,976,478
(GRCh38/hg38)
Size:
5,082 bases
Orientation:
Plus strand

Genomic View for KBTBD11-OT1 Gene

Genes around KBTBD11-OT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KBTBD11-OT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KBTBD11-OT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KBTBD11-OT1 Gene

Proteins for KBTBD11-OT1 Gene

  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GTJ5
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GTJ5

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    212 amino acids
    Molecular mass:
    23510 Da
    Quaternary structure:
    No Data Available
  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GVR1
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GVR1

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    169 amino acids
    Molecular mass:
    19021 Da
    Quaternary structure:
    No Data Available
  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GW43
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GW43

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    146 amino acids
    Molecular mass:
    16241 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KBTBD11-OT1 Gene

Post-translational modifications for KBTBD11-OT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KBTBD11-OT1 Gene

Domains & Families for KBTBD11-OT1 Gene

Protein Domains for KBTBD11-OT1 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KBTBD11-OT1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KBTBD11-OT1 Gene

Function for KBTBD11-OT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KBTBD11-OT1 Gene

Localization for KBTBD11-OT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KBTBD11-OT1 Gene

Pathways & Interactions for KBTBD11-OT1 Gene

SuperPathways for KBTBD11-OT1 Gene

No Data Available

Interacting Proteins for KBTBD11-OT1 Gene

Gene Ontology (GO) - Biological Process for KBTBD11-OT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KBTBD11-OT1 Gene

Drugs & Compounds for KBTBD11-OT1 Gene

No Compound Related Data Available

Transcripts for KBTBD11-OT1 Gene

mRNA/cDNA for KBTBD11-OT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KBTBD11-OT1 Gene

No ASD Table

Relevant External Links for KBTBD11-OT1 Gene

GeneLoc Exon Structure for
KBTBD11-OT1
ECgene alternative splicing isoforms for
KBTBD11-OT1

Expression for KBTBD11-OT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KBTBD11-OT1 Gene

genes like me logo Genes that share expression patterns with KBTBD11-OT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KBTBD11-OT1 Gene

Orthologs for KBTBD11-OT1 Gene

Evolution for KBTBD11-OT1 Gene

ENSEMBL:
Gene Tree for KBTBD11-OT1 (if available)
TreeFam:
Gene Tree for KBTBD11-OT1 (if available)

No data available for Orthologs for KBTBD11-OT1 Gene

Paralogs for KBTBD11-OT1 Gene

No data available for Paralogs for KBTBD11-OT1 Gene

Variants for KBTBD11-OT1 Gene

Sequence variations from dbSNP and Humsavar for KBTBD11-OT1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000095658 -- 1,971,099(+) GCCAA(A/G)GCCAA downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs1001605358 -- 1,974,727(+) TCAGG(-/C)GGGGC intron-variant, upstream-variant-2KB
rs1002120326 -- 1,970,824(+) GTCAA(C/T)AGTGG downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs1002172578 -- 1,970,955(+) GCTTG(C/T)GACAA downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs1002236425 -- 1,970,697(+) GGTTG(C/T)AGTAC downstream-variant-500B, upstream-variant-2KB

Relevant External Links for KBTBD11-OT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KBTBD11-OT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KBTBD11-OT1 Gene

Disorders for KBTBD11-OT1 Gene

Relevant External Links for KBTBD11-OT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
KBTBD11-OT1

No disorders were found for KBTBD11-OT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KBTBD11-OT1 Gene

Publications for KBTBD11-OT1 Gene

No publications were found for KBTBD11-OT1 Gene.

Products for KBTBD11-OT1 Gene

Sources for KBTBD11-OT1 Gene

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