Free for academic non-profit institutions. Other users need a Commercial license

Aliases for KBTBD11-OT1 Gene

Subcategory (RNA class) for KBTBD11-OT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for KBTBD11-OT1 Gene

  • KBTBD11 Overlapping Transcript 1 2 3 5
  • KBTBD11 Overlapping Transcript 1 (Non-Protein Coding) 2

External Ids for KBTBD11-OT1 Gene

Previous GeneCards Identifiers for KBTBD11-OT1 Gene

  • GC00U934388

Summaries for KBTBD11-OT1 Gene

GeneCards Summary for KBTBD11-OT1 Gene

KBTBD11-OT1 (KBTBD11 Overlapping Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for KBTBD11-OT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KBTBD11-OT1 Gene

Genomics for KBTBD11-OT1 Gene

GeneHancer (GH) Regulatory Elements for KBTBD11-OT1 Gene

Promoters and enhancers for KBTBD11-OT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I001971 Enhancer 0.7 dbSUPER 550.8 +0.1 64 0.6 FEZF1 ZNF366 RCOR1 ZNF600 CHD2 ZBTB8A ZEB2 ZNF843 OSR2 PRDM6 KBTBD11 KBTBD11-OT1 LOC101928058
GH08I001877 Enhancer 0.5 dbSUPER 5.3 -90.6 -90611 6.5 CTCF ZNF639 GLIS1 PRDM10 KDM1A ZIC2 KBTBD11-OT1 GC08P001908 ARHGEF10 GC08P001427
GH08I001972 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.8 +3.3 3309 3.9 PKNOX1 FEZF1 ZNF2 YY1 ZNF335 ZNF213 EGR2 PHF21A ZEB2 ZNF623 LOC101928058 KBTBD11 ENSG00000270988 KBTBD11-OT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around KBTBD11-OT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for KBTBD11-OT1 Gene

Genomic Locations for KBTBD11-OT1 Gene
chr8:1,971,397-1,976,478
(GRCh38/hg38)
Size:
5,082 bases
Orientation:
Plus strand

Genomic View for KBTBD11-OT1 Gene

Genes around KBTBD11-OT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KBTBD11-OT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KBTBD11-OT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KBTBD11-OT1 Gene

Proteins for KBTBD11-OT1 Gene

  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GTJ5
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GTJ5

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    212 amino acids
    Molecular mass:
    23510 Da
    Quaternary structure:
    No Data Available
  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GVR1
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GVR1

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    169 amino acids
    Molecular mass:
    19021 Da
    Quaternary structure:
    No Data Available
  • Protein details for KBTBD11-OT1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GW43
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GW43

    Protein attributes for KBTBD11-OT1 Gene

    Size:
    146 amino acids
    Molecular mass:
    16241 Da
    Quaternary structure:
    No Data Available

neXtProt entry for KBTBD11-OT1 Gene

Post-translational modifications for KBTBD11-OT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KBTBD11-OT1 Gene

Domains & Families for KBTBD11-OT1 Gene

Protein Domains for KBTBD11-OT1 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with KBTBD11-OT1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KBTBD11-OT1 Gene

Function for KBTBD11-OT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KBTBD11-OT1 Gene

Localization for KBTBD11-OT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for KBTBD11-OT1 Gene

Pathways & Interactions for KBTBD11-OT1 Gene

SuperPathways for KBTBD11-OT1 Gene

No Data Available

Interacting Proteins for KBTBD11-OT1 Gene

Gene Ontology (GO) - Biological Process for KBTBD11-OT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KBTBD11-OT1 Gene

Drugs & Compounds for KBTBD11-OT1 Gene

No Compound Related Data Available

Transcripts for KBTBD11-OT1 Gene

mRNA/cDNA for KBTBD11-OT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KBTBD11-OT1 Gene

No ASD Table

Relevant External Links for KBTBD11-OT1 Gene

GeneLoc Exon Structure for
KBTBD11-OT1
ECgene alternative splicing isoforms for
KBTBD11-OT1

Expression for KBTBD11-OT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KBTBD11-OT1 Gene

genes like me logo Genes that share expression patterns with KBTBD11-OT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KBTBD11-OT1 Gene

Orthologs for KBTBD11-OT1 Gene

Evolution for KBTBD11-OT1 Gene

ENSEMBL:
Gene Tree for KBTBD11-OT1 (if available)
TreeFam:
Gene Tree for KBTBD11-OT1 (if available)

No data available for Orthologs for KBTBD11-OT1 Gene

Paralogs for KBTBD11-OT1 Gene

No data available for Paralogs for KBTBD11-OT1 Gene

Variants for KBTBD11-OT1 Gene

Sequence variations from dbSNP and Humsavar for KBTBD11-OT1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000095658 -- 1,971,099(+) G/A upstream_transcript_variant
rs1001605358 -- 1,974,727(+) C/ intron_variant
rs1002120326 -- 1,970,824(+) T/C upstream_transcript_variant
rs1002172578 -- 1,970,955(+) C/T upstream_transcript_variant
rs1002236425 -- 1,970,697(+) T/C upstream_transcript_variant

Additional Variant Information for KBTBD11-OT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KBTBD11-OT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KBTBD11-OT1 Gene

Disorders for KBTBD11-OT1 Gene

Additional Disease Information for KBTBD11-OT1

No disorders were found for KBTBD11-OT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for KBTBD11-OT1 Gene

Publications for KBTBD11-OT1 Gene

No publications were found for KBTBD11-OT1 Gene.

Products for KBTBD11-OT1 Gene

Sources for KBTBD11-OT1 Gene

Content
Loading form....