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Aliases for KATNBL1P2 Gene

Subcategory (RNA class) for KATNBL1P2 Gene

lncRNA

Aliases for KATNBL1P2 Gene

  • Katanin Regulatory Subunit B1 Like 1 Pseudogene 2 2 3 5
  • Katanin P80 Subunit B-Like 1 Pseudogene 2 2

External Ids for KATNBL1P2 Gene

ORGUL Members for KATNBL1P2 Gene

Previous GeneCards Identifiers for KATNBL1P2 Gene

  • GC01M095118

Summaries for KATNBL1P2 Gene

GeneCards Summary for KATNBL1P2 Gene

KATNBL1P2 (Katanin Regulatory Subunit B1 Like 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KATNBL1P2 Gene

Genomics for KATNBL1P2 Gene

Regulatory Elements for KATNBL1P2 Gene

Enhancers for KATNBL1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G094643 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.5 4468 6.8 HDGF PKNOX1 ARNT MLX ARID4B DMAP1 YY1 ZNF766 FOS MXD4 F3 SLC44A3 SLC44A3-AS1 KATNBL1P2 LOC105378861
GH01G094653 1.3 Ensembl ENCODE dbSUPER 0.7 -3.0 -3042 2.2 TBP TAF1 JUN RAD21 RFX5 FOSL1 SMC3 RCOR1 FOS EZH2 KATNBL1P2 PGBD4P7
GH01G094656 1.5 Ensembl ENCODE dbSUPER 0.4 -6.5 -6501 2.4 FOXA2 ATF1 MLX ARID4B ZNF48 YY1 TCF12 SP5 MIER2 PPARG F3 TMEM56 KATNBL1P2 PGBD4P7
GH01G094634 1.4 Ensembl ENCODE dbSUPER 0.4 +16.4 16350 1.1 HDAC1 CBX3 TBL1XR1 ZSCAN4 TCF12 ELK1 GATA2 CREM ZNF680 ZBTB11 KATNBL1P2 LOC105378861
GH01G094641 1.2 FANTOM5 ENCODE dbSUPER 0.4 +9.4 9372 1.3 FOXA2 JUN CEBPB EP300 CHAMP1 JUND ZNF316 IKZF1 CEBPA ZBTB33 F3 SLC44A3 KATNBL1P2 LOC105378861
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around KATNBL1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for KATNBL1P2 Gene

Chromosome:
1
Start:
94,650,544 bp from pter
End:
94,651,434 bp from pter
Size:
891 bases
Orientation:
Minus strand

Genomic View for KATNBL1P2 Gene

Genes around KATNBL1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
KATNBL1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for KATNBL1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KATNBL1P2 Gene

Proteins for KATNBL1P2 Gene

Post-translational modifications for KATNBL1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for KATNBL1P2 Gene

Domains & Families for KATNBL1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for KATNBL1P2 Gene

Function for KATNBL1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for KATNBL1P2 Gene

Localization for KATNBL1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for KATNBL1P2 Gene

Pathways & Interactions for KATNBL1P2 Gene

SuperPathways for KATNBL1P2 Gene

No Data Available

Interacting Proteins for KATNBL1P2 Gene

Gene Ontology (GO) - Biological Process for KATNBL1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for KATNBL1P2 Gene

Drugs & Compounds for KATNBL1P2 Gene

No Compound Related Data Available

Transcripts for KATNBL1P2 Gene

mRNA/cDNA for KATNBL1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for KATNBL1P2 Gene

No ASD Table

Relevant External Links for KATNBL1P2 Gene

GeneLoc Exon Structure for
KATNBL1P2
ECgene alternative splicing isoforms for
KATNBL1P2

Expression for KATNBL1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for KATNBL1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of KATNBL1P2 Gene:

KATNBL1P2
genes like me logo Genes that share expression patterns with KATNBL1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for KATNBL1P2 Gene

Orthologs for KATNBL1P2 Gene

Evolution for KATNBL1P2 Gene

ENSEMBL:
Gene Tree for KATNBL1P2 (if available)
TreeFam:
Gene Tree for KATNBL1P2 (if available)

No data available for Orthologs for KATNBL1P2 Gene

Paralogs for KATNBL1P2 Gene

No data available for Paralogs for KATNBL1P2 Gene

Variants for KATNBL1P2 Gene

Relevant External Links for KATNBL1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
KATNBL1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for KATNBL1P2 Gene

Disorders for KATNBL1P2 Gene

No disorders were found for KATNBL1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for KATNBL1P2 Gene

Publications for KATNBL1P2 Gene

No publications were found for KATNBL1P2 Gene.

Products for KATNBL1P2 Gene

Sources for KATNBL1P2 Gene

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