CD82 Gene
protein-coding GIFtS : 59
GC11P044544
CD82 molecule (Previous names: kangai 1 (suppression of tumorigenicity 6, prostate; CD82 antigen (R2 leukocyte antigen, antigen detected by monoclonal and antibody IA4)), CD82 antigen )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbols: ST6, KAI1 )
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Aliases & Descriptions for CD82
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases 4F9 2 C33 2 GR15 2 IA4 1 , 2 , 3 KAI1 2 , 3 , 5 R2 1 , 2 SAR2 2 , 3 , 5 ST6 2 , 3 , 5 TSPAN27 1 , 2 , 3 Tetraspanin-27 3 Tspan-27 3
Descriptions C33 antigen 2 , 3 CD82 antigen 1 , 2 , 3 CD82 molecule 2 Inducible membrane protein R2 2 , 3 Metastasis suppressor Kangai-1 3 R2 leukocyte antigen 2 Suppressor of tumorigenicity protein 6 3 kangai 1 (suppression of tumorigenicity 6, prostate; CD82 antigen (R2 leukocyte antigen, antigen detected by monoclonal and antibody IA4)) 1 , 2 suppression of tumorigenicity 6 2 suppressor of tumorigenicity 6 2
Search outside databases for aliases for CD82 gene
Summaries for CD82 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for CD82 : This metastasis suppressor gene product is a membrane glycoprotein that is a member of thetransmembrane 4 superfamily. Expression of this gene has been shown to be downregulated in tumorprogression of human cancers and can be activated by p53 through a consensus binding sequence inthe promoter. Its expression and that of p53 are strongly correlated, and the loss of expressionof these two proteins is associated with poor survival for prostate cancer patients. Twoalternatively spliced transcript variants encoding distinct isoforms have been found for thisgene. [provided by RefSeq] UniProtKB/Swiss-Prot: CD82_HUMAN, P27701 Function : Associates with CD4 or CD8 and delivers costimulatory signals for the TCR/CD3 pathway
Gene Wiki entry for CD82
Genomic Location for CD82
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the CD82 gene Entrez Gene cytogenetic band: 11p11.2 Ensembl cytogenetic band: 11p11.2 HGNC cytogenetic band: 11p11.2 CD82 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11P044544:
(about GC identifiers )
Start:
44,543,717 bp from pter
End:
44,597,915 bp from pter
Size:
54,199 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000011.8 NT_009237.17 Proteins for CD82
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
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Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: CD82_HUMAN, P27701 (See
protein sequence )Recommended Name: CD82 antigen Size : 267 amino acids; 29626 Da
Subunit : Interacts directly with IGSF8
Subcellular location : Membrane; Multi-pass membrane protein
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001020015.1 NP_002222.1 ENSEMBL proteins: ENSP00000339686 ENSP00000227155 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for CD82: Assays for CD82:
Protein
Domains/ Families for CD82(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P27701 ProtoNet protein and cluster: P27701
1 Blocks protein family : IPB000301 Transmembrane four family signature UniProtKB/Swiss-Prot: CD82_HUMAN, P27701 Similarity : Belongs to the tetraspanin (TM4SF) family
Gene Function for CD82
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
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Sigma-Aldrich ,
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Clones , and
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siRNAs from
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001024844 Applied Biosystems Silencer ® siRNAs for CD82 Sigma-Aldrich siRNA and siRNA Panels for CD82 Sigma-Aldrich shRNA Panels and shRNA for CD82 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024844                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024844                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001024844  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002231 UniProtKB/Swiss-Prot: CD82_HUMAN, P27701 Function : Associates with CD4 or CD8 and delivers costimulatory signals for the TCR/CD3 pathway
1 Gene Ontology (GO) molecular function term (links to tree view) :
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Pathways & Interactions for CD82
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for CD82 5/40 Interacting proteins for CD82 (ENSP00000227155 3 P27701 1 ) via UniProtKB, MINT, and/or STRING (see all 40
)About this table
Drugs & Compounds for CD82 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for CD82 4 Novoseek chemical compound relationships for CD82 gene
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Transcripts for CD82(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001024844 Sigma-Aldrich siRNA and siRNA Panels for CD82 Sigma-Aldrich shRNA Panels and shRNA for CD82 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001024844 NM_002231
REFSEQ mRNAs for CD82 gene (2 alternative transcripts): NM_001024844.1 NM_002231.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001024844 NM_002231
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024844                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001024844                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001024844  
Additional cDNA sequence: AK225410.1 AK225708.1 AK312677.1 AY303776.1 BC000726.2 BC001821.2 BT019761.1 BT019762.1 CR407650.1 CR542255.1 CR593263.1 CR606617.1 CR609000.1 CR615871.1 S48196.1 U20770.1
19 DOTS entries : DT.100793427 DT.313063 DT.97844941 DT.100793432 DT.120712758 DT.120712722 DT.92442010 DT.100793426 DT.120712724 DT.91742256 DT.100793430 DT.120712720 DT.120712748 DT.120712751 DT.40261002 DT.95076548 DT.95076555 DT.120753710 DT.95315953
24/268 AceView cDNA sequences (see all 268
):BP366951 AI354379 BG654786 BE349302 BM353004 BE871165 CR606617 BM914425 BG759651 AU119042 BI753805 CR609000 BU196310 CR615871 AW168332 BU785750 AU077255 BE205860 BU785446 CR593263 BU185132 BM473622 BE293674 BG420128
highest scoring ESTs for CD82 :AA047296 AA148488 AA285230 AA492158 AA640702 AA641265 AA861959 AI358229 AI365988 AI635272
Unigene Cluster for CD82: CD82 molecule Hs.527778 [show with all ESTs ] Unigene Representative Sequence: NM_002231 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for CD82 (see all 7
) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b SP1 :       -   -       -                 SP2 :       -   -       -   -               SP3 :         -       -                 SP4 :               -                 SP5 :                              
About this scheme ECgene alternative splicing isoforms for CD82 2 Ensembl transcripts including schematic representations : ENST00000342935
ENST00000227155
Expression for CD82
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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CD82 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for CD82 1 / 2 / 3
3 probe-sets matching CD82 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GAGAAGGTGCSOURCE GeneReport for Unigene cluster: Hs.527778 UniProtKB/Swiss-Prot: CD82_HUMAN, P27701 Tissue specificity : Lymphoid specific
Orthologs for CD82
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for CD82 gene from 5/12 species (see all 12
)
About this table Species with no ortholog for CD82 ENSEMBL Gene Tree for CD82 Paralogs for CD82 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for CD82 gene CD63 2 TSPAN8 2 CD37 2
SNPs/Variants for CD82 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for CD82 (up to first 250kb)
Disorders & Mutations for CD82
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 600623 disorders : 176807
10/43 Novoseek disease relationships for CD82 gene (see all 43
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
metastasis
75.05
285
18028322 (6), 12753720 (6), 8813131 (6), 17283532 (6) (see all 99 )
prostate cancer
60.20
79
10440748 (7), 8813131 (5), 9254900 (5), 11572762 (4) (see all 35 )
cancer
53.28
96
9671393 (4), 11331321 (3), 9699525 (3), 10440748 (2) (see all 50 )
pancreatic cancer
49.74
33
15944768 (5), 18286698 (5), 8895737 (4), 9699525 (4) (see all 11 )
allelic loss
49.51
12
8813131 (5), 11895916 (1), 9126478 (1), 9254900 (1) (see all 5 )
tumors
47.51
154
12684410 (5), 10568187 (5), 9736732 (5), 10873402 (5) (see all 58 )
primary tumor
44.55
19
11895916 (2), 10582691 (2), 17308076 (2), 15592684 (1) (see all 11 )
bladder cancer
42.31
27
17982617 (4), 10767717 (3), 10840154 (3), 9815782 (3) (see all 8 )
metastatic cancer
37.60
4
16271511 (1), 11715465 (1)
carcinoma
36.01
33
15259074 (6), 18575327 (3), 12747469 (2), 19024519 (2) (see all 15 )
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Medical News for CD82 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for CD82 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/215 PubMed articles for CD82 gene (see all 215
): KAI1, a metastasis suppressor gene for prostate cancer on human chromosome 11p11.2. (PubMed id 7754374) 1, 3, 4 Dong J.T. and Barrett J.C. (1995) Genomic organization of the human KAI1 metastasis-suppressor gene. (PubMed id 9126478) 1, 3, 4 Dong J.T.... Isaacs J.T. (1997) C33 antigen recognized by monoclonal antibodies inhibitory to human T cell leukemia virus type 1-induced syncytium formation is a member of a new family of transmembrane proteins including CD9, CD37, CD53, and CD63. (PubMed id 1401919) 1, 3, 4 Imai T.... Yoshie O. (1992) EWI2/PGRL associates with the metastasis suppressor KAI1/CD82 and inhibits the migration of prostate cancer cells. (PubMed id 12750295) 3, 4 Zhang X.A.... Liu L. (2003) A new superfamily of lymphoid and melanoma cell proteins with extensive homology to Schistosoma mansoni antigen Sm23. (PubMed id 1842498) 3, 4 Gaugitsch H.W.... Baumruker T. (1991) High prevalence of decreased expression of KAI1 metastasis suppressor in human oral carcinogenesis. (PubMed id 11895916) 1, 3 Uzawa K....Tanzawa H. (2002) Loss of KAI1 expression in the progression of colorectal cancer. (PubMed id 10582691) 1, 3 Lombardi D.P....Barrett J.C. (1999) CD82, and CD63 in thyroid cancer. (PubMed id 15375577) 1, 3 Chen Z....Hoang-Vu C. (2004) [Role of tumor metastasis suppressor gene KAI1 in development of colorectal cancer] (PubMed id 12753720) 1, 3 Yang J....Liu L.M. (2003) KAI1/CD82 is a novel target of estrogen receptor-mediated gene repression and downregulated in primary human breast cancer. (PubMed id 18712725) 1, 3 Christgen M....Lehmann U. (2008)
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Genome Databases showing CD82
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing CD82
(According to HUGE )
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Specialized Databases showing CD82 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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