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Aliases for JUNB Gene

Aliases for JUNB Gene

  • JunB Proto-Oncogene, AP-1 Transcription Factor Subunit 2 3 5
  • Transcription Factor Jun-B 3
  • Jun B Proto-Oncogene 3
  • Activator Protein 1 3
  • AP-1 3

External Ids for JUNB Gene

Previous GeneCards Identifiers for JUNB Gene

  • GC19P013033
  • GC19P013125
  • GC19P012747
  • GC19P012763
  • GC19P012902
  • GC19P012474

Summaries for JUNB Gene

GeneCards Summary for JUNB Gene

JUNB (JunB Proto-Oncogene, AP-1 Transcription Factor Subunit) is a Protein Coding gene. Diseases associated with JUNB include Fumarate Hydratase Deficiency. Among its related pathways are Transcriptional activity of SMAD2/SMAD3-SMAD4 heterotrimer and Toll-Like receptor Signaling Pathways. GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and transcription factor binding. An important paralog of this gene is JUN.

UniProtKB/Swiss-Prot for JUNB Gene

  • Transcription factor involved in regulating gene activity following the primary growth factor response. Binds to the DNA sequence 5-TGA[CG]TCA-3.

Gene Wiki entry for JUNB Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JUNB Gene

Genomics for JUNB Gene

Regulatory Elements for JUNB Gene

Enhancers for JUNB Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G012609 1.8 FANTOM5 Ensembl ENCODE 13.7 -179.1 -179136 4.8 CREB3L1 MLX ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZNF136 ZNF700 ZNF564 C19orf43 WDR83OS ZNF799 ZNF44 ZNF844 HNRNPA1P10 ZNF791
GH19G012781 1.9 FANTOM5 ENCODE dbSUPER 12.6 -2.2 -2199 16.0 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 ZNF136 ZNF844 CCDC130 ZNF564 ZNF442 ZNF625 MRI1 ZNF44 C19orf43 WDR83OS
GH19G013148 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +362.2 362199 10.2 MLX CREB3L1 AGO1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZNF709 ZNF136 ZNF564 CCDC130 ZNF442 ZNF791 TRMT1 ZNF44 ZNF625 C19orf43
GH19G012757 1.5 Ensembl ENCODE dbSUPER 12.9 -33.6 -33576 1.2 FOXA2 PKNOX1 AGO1 ARID4B SIN3A ZNF2 ZNF48 GLIS2 ZNF143 KLF13 JUNB HOOK2 ASNA1 C19orf43 TNPO2 MAST1 RNASEH2A RTBDN WDR83OS WDR83
GH19G013160 2.1 FANTOM5 Ensembl ENCODE dbSUPER 7.1 +375.8 375800 13.8 MLX AGO1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC CCDC130 ZNF44 ZNF799 ZNF791 WDR83OS ZNF564 TRMT1 C19orf43 ZNF709 ZNF442
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around JUNB on UCSC Golden Path with GeneCards custom track

Promoters for JUNB Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000287485 304 5201 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC

Genomic Location for JUNB Gene

Chromosome:
19
Start:
12,791,496 bp from pter
End:
12,793,315 bp from pter
Size:
1,820 bases
Orientation:
Plus strand

Genomic View for JUNB Gene

Genes around JUNB on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
JUNB Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for JUNB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JUNB Gene

Proteins for JUNB Gene

  • Protein details for JUNB Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P17275-JUNB_HUMAN
    Recommended name:
    Transcription factor jun-B
    Protein Accession:
    P17275
    Secondary Accessions:
    • Q96GH3

    Protein attributes for JUNB Gene

    Size:
    347 amino acids
    Molecular mass:
    35879 Da
    Quaternary structure:
    • Binds DNA as a homodimer or as a heterodimer with another member of the Jun/Fos family. Interacts with ITCH (via its WW domains).

neXtProt entry for JUNB Gene

Post-translational modifications for JUNB Gene

Other Protein References for JUNB Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for JUNB Gene

Domains & Families for JUNB Gene

Suggested Antigen Peptide Sequences for JUNB Gene

Graphical View of Domain Structure for InterPro Entry

P17275

UniProtKB/Swiss-Prot:

JUNB_HUMAN :
  • Belongs to the bZIP family. Jun subfamily.
Family:
  • Belongs to the bZIP family. Jun subfamily.
genes like me logo Genes that share domains with JUNB: view

Function for JUNB Gene

Molecular function for JUNB Gene

GENATLAS Biochemistry:
jun protooncogene homolog B,ligand induced,immediate (primary) early response gene
UniProtKB/Swiss-Prot Function:
Transcription factor involved in regulating gene activity following the primary growth factor response. Binds to the DNA sequence 5-TGA[CG]TCA-3.
UniProtKB/Swiss-Prot Induction:
By growth factors.

Gene Ontology (GO) - Molecular Function for JUNB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA --
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IBA,IEA --
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA --
GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding IEA --
GO:0003677 DNA binding TAS 10764760
genes like me logo Genes that share ontologies with JUNB: view
genes like me logo Genes that share phenotypes with JUNB: view

Animal Model Products

Transcription Factor Targets for JUNB Gene

Selected GeneGlobe predicted Target genes for JUNB

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for JUNB

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models and HOMER Transcription for JUNB Gene

Localization for JUNB Gene

Subcellular locations from UniProtKB/Swiss-Prot for JUNB Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for JUNB gene
Compartment Confidence
nucleus 5
extracellular 2

Gene Ontology (GO) - Cellular Components for JUNB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000785 chromatin TAS 2513129
GO:0000790 nuclear chromatin IBA --
GO:0005634 nucleus IEA --
GO:0005654 nucleoplasm TAS --
GO:0005667 transcription factor complex IBA --
genes like me logo Genes that share ontologies with JUNB: view

Pathways & Interactions for JUNB Gene

genes like me logo Genes that share pathways with JUNB: view

SIGNOR curated interactions for JUNB Gene

Is activated by:
Is inactivated by:

Gene Ontology (GO) - Biological Process for JUNB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IBA --
GO:0001570 vasculogenesis IEA --
GO:0001649 osteoblast differentiation IEA --
GO:0001701 in utero embryonic development IEA --
GO:0001829 trophectodermal cell differentiation IEA --
genes like me logo Genes that share ontologies with JUNB: view

Drugs & Compounds for JUNB Gene

(38) Drugs for JUNB Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(19) Additional Compounds for JUNB Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with JUNB: view

Transcripts for JUNB Gene

mRNA/cDNA for JUNB Gene

(1) REFSEQ mRNAs :
(9) Additional mRNA sequences :
(667) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for JUNB Gene

Jun B proto-oncogene:
Representative Sequences:

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for JUNB

Alternative Splicing Database (ASD) splice patterns (SP) for JUNB Gene

No ASD Table

Relevant External Links for JUNB Gene

GeneLoc Exon Structure for
JUNB
ECgene alternative splicing isoforms for
JUNB

Expression for JUNB Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for JUNB Gene

mRNA differential expression in normal tissues according to GTEx for JUNB Gene

This gene is overexpressed in Fallopian Tube (x4.9).

Protein differential expression in normal tissues from HIPED for JUNB Gene

This gene is overexpressed in Placenta (19.9), Peripheral blood mononuclear cells (18.5), CD8 Tcells (13.7), and Monocytes (7.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for JUNB Gene



Protein tissue co-expression partners for JUNB Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of JUNB Gene:

JUNB

SOURCE GeneReport for Unigene cluster for JUNB Gene:

Hs.25292

Evidence on tissue expression from TISSUES for JUNB Gene

  • Pancreas(4.6)
  • Nervous system(3.8)
  • Lung(3.2)
  • Intestine(3.1)
  • Muscle(3.1)
  • Kidney(2.9)
  • Skin(2.8)
  • Blood(2.7)
  • Bone marrow(2.6)
  • Liver(2.6)
  • Heart(2.5)
  • Adrenal gland(2)
  • Stomach(2)
genes like me logo Genes that share expression patterns with JUNB: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for JUNB Gene

Orthologs for JUNB Gene

This gene was present in the common ancestor of animals.

Orthologs for JUNB Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia JUNB 34 35
  • 99.9 (n)
dog
(Canis familiaris)
Mammalia JUNB 35 34
  • 92.89 (n)
OneToOne
cow
(Bos Taurus)
Mammalia JUNB 34 35
  • 92.7 (n)
mouse
(Mus musculus)
Mammalia Junb 16 35 34
  • 88.95 (n)
rat
(Rattus norvegicus)
Mammalia Junb 34
  • 88.47 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia JUNB 35
  • 74 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia JUNB 35
  • 47 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia junb 34
  • 60 (n)
zebrafish
(Danio rerio)
Actinopterygii junba 35
  • 58 (a)
OneToMany
junbb 35
  • 55 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta Jra 35
  • 30 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 34 (a)
OneToMany
Species where no ortholog for JUNB was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for JUNB Gene

ENSEMBL:
Gene Tree for JUNB (if available)
TreeFam:
Gene Tree for JUNB (if available)

Paralogs for JUNB Gene

Paralogs for JUNB Gene

(3) SIMAP similar genes for JUNB Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with JUNB: view

Variants for JUNB Gene

Sequence variations from dbSNP and Humsavar for JUNB Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000901426 -- 12,790,070(+) CGGGC(C/T)AATGG upstream-variant-2KB
rs1001278645 -- 12,793,554(+) GGTGC(G/T)CCGGC downstream-variant-500B
rs1001569409 -- 12,793,185(+) CTCTC(C/T)GCACC utr-variant-3-prime
rs1002071250 -- 12,792,427(+) ACACG(C/T)GCCGC reference, missense
rs1002097621 -- 12,792,999(+) CCCCC(A/T)TCCAC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for JUNB Gene

Variant ID Type Subtype PubMed ID
dgv138n111 CNV deletion 26073780
nsv1160586 CNV duplication 26073780
nsv953977 CNV deletion 24416366

Variation tolerance for JUNB Gene

Gene Damage Index Score: 0.72; 15.32% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for JUNB Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
JUNB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for JUNB Gene

Disorders for JUNB Gene

MalaCards: The human disease database

(1) MalaCards diseases for JUNB Gene - From: GeneCards

Disorder Aliases PubMed IDs
fumarate hydratase deficiency
  • fumarase deficiency
- elite association - COSMIC cancer census association via MalaCards
Search JUNB in MalaCards View complete list of genes associated with diseases

Relevant External Links for JUNB

Genetic Association Database (GAD)
JUNB
Human Genome Epidemiology (HuGE) Navigator
JUNB
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
JUNB
genes like me logo Genes that share disorders with JUNB: view

No data available for UniProtKB/Swiss-Prot and Genatlas for JUNB Gene

Publications for JUNB Gene

  1. jun-B inhibits and c-fos stimulates the transforming and trans- activating activities of c-jun. (PMID: 2513129) Schuette J. … Minna J. (Cell 1989) 2 3 4 64
  2. Over-expression of JunB inhibits mitochondrial stress and cytotoxicity in human lymphoma cells exposed to chronic oxidative stress. (PMID: 20132737) Son Y.O. … Lee J.C. (BMB Rep 2010) 3 22 64
  3. Expression and clinical significance of p53, JunB and KAI1/CD82 in human hepatocellular carcinoma. (PMID: 19666408) Guo C. … Yang X. (HBPD INT 2009) 3 22 64
  4. [Methylation status of JunB and CDH13 gene promoter in CD34(+)CD38(-) chronic myelogenous leukemia cells]. (PMID: 20030915) Wang X.J. … Huang S.A. (Zhongguo Shi Yan Xue Ye Xue Za Zhi 2009) 3 22 64
  5. Hypomethylation of CD30 CpG islands with aberrant JunB expression drives CD30 induction in Hodgkin lymphoma and anaplastic large cell lymphoma. (PMID: 17965727) Watanabe M. … Horie R. (Lab. Invest. 2008) 3 22 64

Products for JUNB Gene

  • Addgene plasmids for JUNB

Sources for JUNB Gene

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