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Aliases & Descriptions for JTB
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| HJTB 2 | | HSPC222 2 | | OTTHUMP00000034759 2 | | PAR 2, 5 | | hJT 1, 2 |
| | | Descriptions |
|---|
| Jumping translocation breakpoint protein 3 | | PAR protein 3 | | Prostate androgen-regulated protein 3 | | jumping translocation breakpoint 2 | | prostate androgen-regulated 2 |
|
| | Search outside databases for aliases for JTB genePrevious GC identifers: GC01M151763 GC01M149677 GC01M150722 GC01M151163 GC01M150759 |
Summaries for JTB(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| Gene Wiki entry for JTB |
Genomic Location for JTB
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the JTB gene 
Entrez Gene cytogenetic band: 1q21 Ensembl cytogenetic band: 1q21.3 HGNC cytogenetic band: 1q21JTB Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M152213:
(about GC identifiers)
Start:
|
152,213,369 bp from pter |
End:
|
152,217,075 bp from pter |
Size:
|
3,707 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000001.9 NT_004487.18
| Proteins for JTB
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: JTB_HUMAN, O76095 (See
protein sequence)Recommended Name: Protein JTB precursor Size: 146 amino acids; 16358 Da
Subcellular location: Membrane; Single-pass type I membrane protein (Potential)
Secondary accessions: O95442REFSEQ proteins: NP_006685.1
ENSEMBL proteins: ENSP00000271843 ENSP00000349069 ENSP00000357578
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for JTB: Assays for JTB: | Protein
Domains/ Families for JTB(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry O76095
ProtoNet protein and cluster: O76095 1 Blocks protein family: IPB008657 Jumping translocation breakpoint
UniProtKB/Swiss-Prot: JTB_HUMAN, O76095Similarity: Belongs to the JTB family | Gene Function for JTB
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006694
Applied Biosystems Silencer® siRNAs for JTB
Sigma-Aldrich siRNA for JTB  Sigma-Aldrich shRNA for JTB  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_006694                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006694                                  untagged cDNA clones in CMV expression vector (see all 2): NM_006694 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006694
Genatlas biochemistry entry for JTB:jumping translocation breakpoint,fused with the telomeric repeats case of jumping translocation | Pathways & Interactions for JTB
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Interacting protein for JTB (ENSP000002718433) via UniProtKB, MINT, and/or STRINGAbout this table
|
Drugs & Compounds for JTB(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for JTB
|
Transcripts for JTB(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006694
Sigma-Aldrich siRNA for JTB  Sigma-Aldrich shRNA for JTB  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_006694 REFSEQ mRNAs for JTB gene: NM_006694.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006694               OriGene GFP tagged cDNA clone in CMV expression vector: NM_006694                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006694                                  untagged cDNA clones in CMV expression vector (see all 2): NM_006694  Additional cDNA sequence: AB016488.1 AF115850.2 AF131797.1 AF151056.1 AK312106.1 BC000499.1 BC000996.2 BC001363.1 BC001667.1 BC004239.1 BC019277.1 BT007285.1 CR456985.1 CR595312.1 CR599832.1 CR603308.1 CR608719.1 CR613105.1 CR618181.1 CR620505.1 CR625103.1 24/26 DOTS entries (see all 26
): DT.421099 DT.75133749 DT.75130019 DT.100817421 DT.100817416 DT.97844584 DT.95277027 DT.121436598 DT.92453787 DT.95277035 DT.121436576 DT.121436568 DT.100039009 DT.95277024 DT.100817411 DT.100817420 DT.92453774 DT.95155142 DT.95104852 DT.97844583 DT.121436377 DT.92453775 DT.95277026 DT.95277029 24/930 AceView cDNA sequences (see all 930
):AI189370 BC001667 AI040681 AI083503 BU196184 BQ955026 AI568647 AA831877 BE890968 CB143317 AI090977 BE396510 BC000996 CR625103 AA583766 BQ417123 CB148747 AF498948 BM828283 AA701486 AI581804 CA503023 AW070310 BC019277
highest scoring ESTs for JTB:AA147827 AA186580 AA278716 AA312833 AA313810 AA324649 AA384595 AA403075 AA424759 AA478159 Unigene Cluster for JTB: Jumping translocation breakpoint Hs.6396 [show with all ESTs]Unigene Representative Sequence: BQ062593
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000271843
ENST00000356648
ENST00000368589
|
Expression for JTB
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| JTB expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for JTB
1 / 2 / 3 10 probe-sets matching JTB gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CAGCTCATCT
SOURCE GeneReport for Unigene cluster: Hs.6396
Expression variation in blood from EXPOLDB for JTB UniProtKB/Swiss-Prot: JTB_HUMAN, O76095Tissue specificity: Expressed in all normal human tissues studied but overexpressed in most of their malignant counterparts |
Orthologs for JTB
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for JTB gene from 5/6 species (see all 6
)
About this table Species with no ortholog for JTB
ENSEMBL Gene Tree for JTB | Paralogs for JTB(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for JTB(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for JTB (up to first 250kb)
|
Disorders & Mutations for JTB
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 604671
|
Medical News for JTB(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for JTB (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/11 PubMed articles for JTB gene (see all 11
): |
Search for JTB
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing JTB
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing JTB
(According to HUGE)
About This Section
| -- |
Specialized Databases showing JTB(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for JTB(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for JTB:

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| | Recombinant Proteins (JTB) | | Antibodies (JTB) |
| | | Search Tocris compounds for JTB |
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Incremental update: 13 Oct 2009
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