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Aliases for JRKL-AS1 Gene

Subcategory (RNA class) for JRKL-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for JRKL-AS1 Gene

  • JRKL Antisense RNA 1 2 3
  • JRKL Antisense RNA 1 (Non-Protein Coding) 2

External Ids for JRKL-AS1 Gene

Previous GeneCards Identifiers for JRKL-AS1 Gene

  • GC11M096181

Summaries for JRKL-AS1 Gene

GeneCards Summary for JRKL-AS1 Gene

JRKL-AS1 (JRKL Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JRKL-AS1 Gene

Genomics for JRKL-AS1 Gene

Genomic Location for JRKL-AS1 Gene

Start:
96,443,281 bp from pter
End:
96,506,876 bp from pter
Size:
63,596 bases
Orientation:
Minus strand

Genomic View for JRKL-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for JRKL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JRKL-AS1 Gene

No data available for Regulatory Elements for JRKL-AS1 Gene

Proteins for JRKL-AS1 Gene

Post-translational modifications for JRKL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JRKL-AS1 Gene

Domains for JRKL-AS1 Gene

Gene Families for JRKL-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with JRKL-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JRKL-AS1 Gene

Function for JRKL-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for JRKL-AS1 Gene

Localization for JRKL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for JRKL-AS1 Gene

Pathways for JRKL-AS1 Gene

SuperPathways for JRKL-AS1 Gene

No Data Available

Interacting Proteins for JRKL-AS1 Gene

Gene Ontology (GO) - Biological Process for JRKL-AS1 Gene

None

No data available for Pathways by source for JRKL-AS1 Gene

Transcripts for JRKL-AS1 Gene

mRNA/cDNA for JRKL-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for JRKL-AS1 Gene

JRKL antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for JRKL-AS1 Gene

No ASD Table

Relevant External Links for JRKL-AS1 Gene

GeneLoc Exon Structure for
JRKL-AS1
ECgene alternative splicing isoforms for
JRKL-AS1

Expression for JRKL-AS1 Gene

mRNA expression in normal human tissues for JRKL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for JRKL-AS1 Gene

This gene is overexpressed in Testis (53.0).

SOURCE GeneReport for Unigene cluster for JRKL-AS1 Gene Hs.742044

genes like me logo Genes that share expressions with JRKL-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for JRKL-AS1 Gene

Orthologs for JRKL-AS1 Gene

Evolution for JRKL-AS1 Gene

ENSEMBL:
Gene Tree for JRKL-AS1 (if available)
TreeFam:
Gene Tree for JRKL-AS1 (if available)

No data available for Orthologs for JRKL-AS1 Gene

Paralogs for JRKL-AS1 Gene

No data available for Paralogs for JRKL-AS1 Gene

Variants for JRKL-AS1 Gene

Sequence variations from dbSNP and Humsavar for JRKL-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs474119 -- 96,497,104(+) tggct(C/T)gatct intron-variant
rs474782 -- 96,506,277(+) tctac(A/G)tctca intron-variant
rs496825 -- 96,493,660(+) ATAAT(A/G)GATTG intron-variant
rs499680 -- 96,484,523(+) CTAGG(A/G)TTGGC intron-variant
rs526561 -- 96,496,015(-) GCTGT(G/T)TGTTG intron-variant

Relevant External Links for JRKL-AS1 Gene

HapMap Linkage Disequilibrium report
JRKL-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for JRKL-AS1 Gene

Disorders for JRKL-AS1 Gene

No disorders were found for JRKL-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for JRKL-AS1 Gene

Publications for JRKL-AS1 Gene

No publications were found for JRKL-AS1 Gene.

Products for JRKL-AS1 Gene

Sources for JRKL-AS1 Gene

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