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Aliases for JRKL-AS1 Gene

Subcategory (RNA class) for JRKL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for JRKL-AS1 Gene

  • JRKL Antisense RNA 1 2 3 5
  • JRKL Antisense RNA 1 (Non-Protein Coding) 2

External Ids for JRKL-AS1 Gene

Previous GeneCards Identifiers for JRKL-AS1 Gene

  • GC11M096181

Summaries for JRKL-AS1 Gene

GeneCards Summary for JRKL-AS1 Gene

JRKL-AS1 (JRKL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for JRKL-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JRKL-AS1 Gene

Genomics for JRKL-AS1 Gene

GeneHancer (GH) Regulatory Elements for JRKL-AS1 Gene

Promoters and enhancers for JRKL-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I096486 Enhancer 1 Ensembl ENCODE 0.4 +19.4 19377 1.1 HDAC1 ELF3 ATF1 FOXA2 ZNF644 TEAD3 POLR2B ZNF766 POLR2A FOXK2 LOC105369443 GC11M096475 RNA5SP346 JRKL-AS1 JRKL
GH11I096463 Enhancer 1 Ensembl ENCODE 0.3 +42.4 42375 1.4 CTCF FOXA2 ZNF384 BMI1 ZNF2 RAD21 ZNF7 RFX5 CHAMP1 ZNF335 GC11M096475 RNA5SP346 JRKL-AS1 JRKL
GH11I096455 Enhancer 0.3 ENCODE 0.2 +50.5 50480 0.9 POU5F1 CCDC82 GC11M096475 RNA5SP346 JRKL-AS1 JRKL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around JRKL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for JRKL-AS1 Gene

Genomic Locations for JRKL-AS1 Gene
63,596 bases
Minus strand

Genomic View for JRKL-AS1 Gene

Genes around JRKL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
JRKL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for JRKL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JRKL-AS1 Gene

Proteins for JRKL-AS1 Gene

Post-translational modifications for JRKL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JRKL-AS1 Gene

Domains & Families for JRKL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JRKL-AS1 Gene

Function for JRKL-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for JRKL-AS1 Gene

Localization for JRKL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for JRKL-AS1 Gene

Pathways & Interactions for JRKL-AS1 Gene

SuperPathways for JRKL-AS1 Gene

No Data Available

Interacting Proteins for JRKL-AS1 Gene

Gene Ontology (GO) - Biological Process for JRKL-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for JRKL-AS1 Gene

Drugs & Compounds for JRKL-AS1 Gene

No Compound Related Data Available

Transcripts for JRKL-AS1 Gene

mRNA/cDNA for JRKL-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for JRKL-AS1 Gene

JRKL antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for JRKL-AS1 Gene

No ASD Table

Relevant External Links for JRKL-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for JRKL-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for JRKL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for JRKL-AS1 Gene

This gene is overexpressed in Testis (x53.0).

SOURCE GeneReport for Unigene cluster for JRKL-AS1 Gene:

genes like me logo Genes that share expression patterns with JRKL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for JRKL-AS1 Gene

Orthologs for JRKL-AS1 Gene

Evolution for JRKL-AS1 Gene

Gene Tree for JRKL-AS1 (if available)
Gene Tree for JRKL-AS1 (if available)

No data available for Orthologs for JRKL-AS1 Gene

Paralogs for JRKL-AS1 Gene

No data available for Paralogs for JRKL-AS1 Gene

Variants for JRKL-AS1 Gene

Sequence variations from dbSNP and Humsavar for JRKL-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000010802 -- 96,485,134(-) A/G intron_variant
rs1000063160 -- 96,485,379(-) A/T intron_variant
rs1000104289 -- 96,483,251(-) A/G intron_variant
rs1000270241 -- 96,460,047(-) G/T intron_variant
rs1000271093 -- 96,502,820(-) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for JRKL-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1255n100 CNV loss 25217958
dgv1256n100 CNV gain 25217958
dgv2106n54 CNV loss 21841781
esv2111227 CNV deletion 18987734
esv2569306 CNV deletion 19546169
esv2744944 CNV deletion 23290073
esv3255829 CNV deletion 24192839
esv3548196 CNV deletion 23714750
esv9550 CNV loss 19470904
nsv1152153 CNV deletion 26484159
nsv39134 CNV deletion 16902084
nsv516287 CNV loss 19592680

Additional Variant Information for JRKL-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for JRKL-AS1 Gene

Disorders for JRKL-AS1 Gene

Additional Disease Information for JRKL-AS1

No disorders were found for JRKL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for JRKL-AS1 Gene

Publications for JRKL-AS1 Gene

No publications were found for JRKL-AS1 Gene.

Products for JRKL-AS1 Gene

Sources for JRKL-AS1 Gene

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