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Aliases for JHDM1D-AS1 Gene

Subcategory (RNA class) for JHDM1D-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for JHDM1D-AS1 Gene

  • JHDM1D Antisense RNA 1 (Head To Head) 2 3

External Ids for JHDM1D-AS1 Gene

Previous GeneCards Identifiers for JHDM1D-AS1 Gene

  • GC07P139879

Summaries for JHDM1D-AS1 Gene

GeneCards Summary for JHDM1D-AS1 Gene

JHDM1D-AS1 (JHDM1D Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JHDM1D-AS1 Gene

Genomics for JHDM1D-AS1 Gene

Genomic Location for JHDM1D-AS1 Gene

Start:
140,177,261 bp from pter
End:
140,179,640 bp from pter
Size:
2,380 bases
Orientation:
Plus strand

Genomic View for JHDM1D-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for JHDM1D-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JHDM1D-AS1 Gene

No data available for Regulatory Elements for JHDM1D-AS1 Gene

Proteins for JHDM1D-AS1 Gene

Post-translational modifications for JHDM1D-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JHDM1D-AS1 Gene

Domains for JHDM1D-AS1 Gene

Gene Families for JHDM1D-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with JHDM1D-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JHDM1D-AS1 Gene

Function for JHDM1D-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for JHDM1D-AS1 Gene

Localization for JHDM1D-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for JHDM1D-AS1 Gene

Pathways for JHDM1D-AS1 Gene

SuperPathways for JHDM1D-AS1 Gene

No Data Available

Interacting Proteins for JHDM1D-AS1 Gene

Gene Ontology (GO) - Biological Process for JHDM1D-AS1 Gene

None

No data available for Pathways by source for JHDM1D-AS1 Gene

Transcripts for JHDM1D-AS1 Gene

mRNA/cDNA for JHDM1D-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate JHDM1D-AS1
    • Block miRNA regulation of JHDM1D-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for JHDM1D-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for JHDM1D-AS1 Gene

    No ASD Table

    Relevant External Links for JHDM1D-AS1 Gene

    GeneLoc Exon Structure for
    JHDM1D-AS1
    ECgene alternative splicing isoforms for
    JHDM1D-AS1

    Expression for JHDM1D-AS1 Gene

    mRNA expression in normal human tissues for JHDM1D-AS1 Gene

    genes like me logo Genes that share expressions with JHDM1D-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for JHDM1D-AS1 Gene

    Orthologs for JHDM1D-AS1 Gene

    Evolution for JHDM1D-AS1 Gene

    ENSEMBL:
    Gene Tree for JHDM1D-AS1 (if available)
    TreeFam:
    Gene Tree for JHDM1D-AS1 (if available)

    No data available for Orthologs for JHDM1D-AS1 Gene

    Paralogs for JHDM1D-AS1 Gene

    No data available for Paralogs for JHDM1D-AS1 Gene

    Variants for JHDM1D-AS1 Gene

    Sequence variations from dbSNP and Humsavar for JHDM1D-AS1 Gene

    SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
    rs194208 -- 140,179,908(-) gaggc(C/T)gaggc downstream-variant-500B
    rs194209 -- 140,179,793(-) tgtaa(C/T)cccag downstream-variant-500B
    rs194210 -- 140,179,775(-) ggagg(C/T)tgagg downstream-variant-500B
    rs194211 -- 140,179,745(-) cggga(A/G)gtgga downstream-variant-500B
    rs194212 -- 140,179,681(-) agact(C/T)catct downstream-variant-500B

    Relevant External Links for JHDM1D-AS1 Gene

    HapMap Linkage Disequilibrium report
    JHDM1D-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for JHDM1D-AS1 Gene

    Disorders for JHDM1D-AS1 Gene

    No disorders were found for JHDM1D-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for JHDM1D-AS1 Gene

    Publications for JHDM1D-AS1 Gene

    1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

    Products for JHDM1D-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate JHDM1D-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for JHDM1D-AS1
      • Block miRNA regulation of JHDM1D-AS1 using miScript Target Protectors

      Sources for JHDM1D-AS1 Gene

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