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Aliases for JHDM1D-AS1 Gene

Subcategory (RNA class) for JHDM1D-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for JHDM1D-AS1 Gene

  • JHDM1D Antisense RNA 1 (Head To Head) 2 3 5

External Ids for JHDM1D-AS1 Gene

Previous GeneCards Identifiers for JHDM1D-AS1 Gene

  • GC07P139879

Summaries for JHDM1D-AS1 Gene

GeneCards Summary for JHDM1D-AS1 Gene

JHDM1D-AS1 (JHDM1D Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JHDM1D-AS1 Gene

Genomics for JHDM1D-AS1 Gene

Regulatory Elements for JHDM1D-AS1 Gene

Enhancers for JHDM1D-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around JHDM1D-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for JHDM1D-AS1 Gene

Chromosome:
7
Start:
140,177,261 bp from pter
End:
140,179,640 bp from pter
Size:
2,380 bases
Orientation:
Plus strand

Genomic View for JHDM1D-AS1 Gene

Genes around JHDM1D-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
JHDM1D-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for JHDM1D-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JHDM1D-AS1 Gene

Proteins for JHDM1D-AS1 Gene

Post-translational modifications for JHDM1D-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JHDM1D-AS1 Gene

Domains & Families for JHDM1D-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JHDM1D-AS1 Gene

Function for JHDM1D-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for JHDM1D-AS1 Gene

Localization for JHDM1D-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for JHDM1D-AS1 Gene

Pathways & Interactions for JHDM1D-AS1 Gene

SuperPathways for JHDM1D-AS1 Gene

No Data Available

Interacting Proteins for JHDM1D-AS1 Gene

Gene Ontology (GO) - Biological Process for JHDM1D-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for JHDM1D-AS1 Gene

Drugs & Compounds for JHDM1D-AS1 Gene

No Compound Related Data Available

Transcripts for JHDM1D-AS1 Gene

mRNA/cDNA for JHDM1D-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for JHDM1D-AS1 Gene

No ASD Table

Relevant External Links for JHDM1D-AS1 Gene

GeneLoc Exon Structure for
JHDM1D-AS1
ECgene alternative splicing isoforms for
JHDM1D-AS1

Expression for JHDM1D-AS1 Gene

mRNA expression in normal human tissues for JHDM1D-AS1 Gene

genes like me logo Genes that share expression patterns with JHDM1D-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for JHDM1D-AS1 Gene

Orthologs for JHDM1D-AS1 Gene

Evolution for JHDM1D-AS1 Gene

ENSEMBL:
Gene Tree for JHDM1D-AS1 (if available)
TreeFam:
Gene Tree for JHDM1D-AS1 (if available)

No data available for Orthologs for JHDM1D-AS1 Gene

Paralogs for JHDM1D-AS1 Gene

No data available for Paralogs for JHDM1D-AS1 Gene

Variants for JHDM1D-AS1 Gene

Sequence variations from dbSNP and Humsavar for JHDM1D-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs194208 -- 140,179,908(-) gaggc(C/T)gaggc downstream-variant-500B
rs194209 -- 140,179,793(-) tgtaa(C/T)cccag downstream-variant-500B
rs194210 -- 140,179,775(-) ggagg(C/T)tgagg downstream-variant-500B
rs194211 -- 140,179,745(-) cggga(A/G)gtgga downstream-variant-500B
rs194212 -- 140,179,681(-) agact(C/T)catct downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for JHDM1D-AS1 Gene

Disorders for JHDM1D-AS1 Gene

Relevant External Links for JHDM1D-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
JHDM1D-AS1

No disorders were found for JHDM1D-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for JHDM1D-AS1 Gene

Publications for JHDM1D-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for JHDM1D-AS1 Gene

Sources for JHDM1D-AS1 Gene

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