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Aliases for JAZF1-AS1 Gene

Subcategory (RNA class) for JAZF1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for JAZF1-AS1 Gene

  • JAZF1 Antisense RNA 1 2 3
  • JAZF1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for JAZF1-AS1 Gene

ORGUL Members for JAZF1-AS1 Gene

Summaries for JAZF1-AS1 Gene

GeneCards Summary for JAZF1-AS1 Gene

JAZF1-AS1 (JAZF1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JAZF1-AS1 Gene

Genomics for JAZF1-AS1 Gene

Genomic Location for JAZF1-AS1 Gene

Start:
28,180,322 bp from pter
End:
28,243,917 bp from pter
Size:
63,596 bases
Orientation:
Plus strand

Genomic View for JAZF1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for JAZF1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JAZF1-AS1 Gene

No data available for Regulatory Elements for JAZF1-AS1 Gene

Proteins for JAZF1-AS1 Gene

Post-translational modifications for JAZF1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for JAZF1-AS1 Gene

Domains for JAZF1-AS1 Gene

Gene Families for JAZF1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with JAZF1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for JAZF1-AS1 Gene

Function for JAZF1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for JAZF1-AS1 Gene

Localization for JAZF1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for JAZF1-AS1 Gene

Pathways for JAZF1-AS1 Gene

SuperPathways for JAZF1-AS1 Gene

No Data Available

Interacting Proteins for JAZF1-AS1 Gene

Gene Ontology (GO) - Biological Process for JAZF1-AS1 Gene

None

No data available for Pathways by source for JAZF1-AS1 Gene

Transcripts for JAZF1-AS1 Gene

mRNA/cDNA for JAZF1-AS1 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for JAZF1-AS1 Gene

JAZF1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for JAZF1-AS1 Gene

No ASD Table

Relevant External Links for JAZF1-AS1 Gene

GeneLoc Exon Structure for
JAZF1-AS1
ECgene alternative splicing isoforms for
JAZF1-AS1

Expression for JAZF1-AS1 Gene

mRNA expression in normal human tissues for JAZF1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for JAZF1-AS1 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (5.3), Brain - Cortex (4.4), and Brain - Cerebellar Hemisphere (4.2).

SOURCE GeneReport for Unigene cluster for JAZF1-AS1 Gene Hs.434307

genes like me logo Genes that share expressions with JAZF1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for JAZF1-AS1 Gene

Orthologs for JAZF1-AS1 Gene

Evolution for JAZF1-AS1 Gene

ENSEMBL:
Gene Tree for JAZF1-AS1 (if available)
TreeFam:
Gene Tree for JAZF1-AS1 (if available)

No data available for Orthologs for JAZF1-AS1 Gene

Paralogs for JAZF1-AS1 Gene

No data available for Paralogs for JAZF1-AS1 Gene

Variants for JAZF1-AS1 Gene

Sequence variations from dbSNP and Humsavar for JAZF1-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs122362 -- 28,237,276(+) CCAGG(A/C)GGGCT intron-variant
rs475615 -- 28,224,206(+) TGCTT(C/T)GAGTA intron-variant
rs476860 -- 28,225,995(+) TTTGG(G/T)TATAA intron-variant
rs478266 -- 28,221,725(+) TATAA(C/T)ATCTC intron-variant
rs488837 -- 28,228,257(+) ATTTC(C/T)GTACA intron-variant

Relevant External Links for JAZF1-AS1 Gene

HapMap Linkage Disequilibrium report
JAZF1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for JAZF1-AS1 Gene

Disorders for JAZF1-AS1 Gene

No disorders were found for JAZF1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for JAZF1-AS1 Gene

Publications for JAZF1-AS1 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3
  2. A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. (PMID: 21980299) Bradfield J.P. … Hakonarson H. (PLoS Genet. 2011) 3

Products for JAZF1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate JAZF1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for JAZF1-AS1
    • Block miRNA regulation of JAZF1-AS1 using miScript Target Protectors

    Sources for JAZF1-AS1 Gene

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