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Aliases for ITPRIP Gene

Aliases for ITPRIP Gene

  • Inositol 1,4,5-Trisphosphate Receptor Interacting Protein 2 3
  • KIAA1754 2 3 4
  • DANGER 3 4
  • Inositol 1,4,5-Trisphosphate Receptor-Interacting Protein 3
  • Inositol 1,4,5-Triphosphate Receptor Interacting Protein 2
  • Inositol 1,4,5-Triphosphate Receptor-Interacting Protein 3
  • Protein DANGER 4
  • BA127L20.2 3
  • BA127L20 3

External Ids for ITPRIP Gene

Previous HGNC Symbols for ITPRIP Gene

  • KIAA1754

Previous GeneCards Identifiers for ITPRIP Gene

  • GC10M106062
  • GC10M099703

Summaries for ITPRIP Gene

Entrez Gene Summary for ITPRIP Gene

  • This gene encodes a membrane-associated protein that binds the inositol 1,4,5-trisphosphate receptor (ITPR). The encoded protein enhances the sensitivity of ITPR to intracellular calcium signaling. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]

GeneCards Summary for ITPRIP Gene

ITPRIP (Inositol 1,4,5-Trisphosphate Receptor Interacting Protein) is a Protein Coding gene. GO annotations related to this gene include protein kinase inhibitor activity. An important paralog of this gene is ITPRIPL2.

UniProtKB/Swiss-Prot for ITPRIP Gene

  • Enhances Ca(2+)-mediated inhibition of inositol 1,4,5-triphosphate receptor (ITPR) Ca(2+) release.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPRIP Gene

Genomics for ITPRIP Gene

Regulatory Elements for ITPRIP Gene

Genomic Location for ITPRIP Gene

Start:
104,309,696 bp from pter
End:
104,338,493 bp from pter
Size:
28,798 bases
Orientation:
Minus strand

Genomic View for ITPRIP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ITPRIP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITPRIP Gene

Proteins for ITPRIP Gene

  • Protein details for ITPRIP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IWB1-IPRI_HUMAN
    Recommended name:
    Inositol 1,4,5-trisphosphate receptor-interacting protein
    Protein Accession:
    Q8IWB1
    Secondary Accessions:
    • D3DRA5
    • Q5JU17
    • Q96MS8
    • Q9C0A9

    Protein attributes for ITPRIP Gene

    Size:
    547 amino acids
    Molecular mass:
    62060 Da
    Quaternary structure:
    • Interacts with ITPR.
    SequenceCaution:
    • Sequence=BAB21845.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for ITPRIP Gene

Proteomics data for ITPRIP Gene at MOPED

Post-translational modifications for ITPRIP Gene

  • Ubiquitination at Lys66, Lys244, Lys261, and Lys515
  • Glycosylation at Asn27 and Asn80
  • Modification sites at PhosphoSitePlus

Other Protein References for ITPRIP Gene

No data available for DME Specific Peptides for ITPRIP Gene

Domains for ITPRIP Gene

Protein Domains for ITPRIP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ITPRIP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IWB1

UniProtKB/Swiss-Prot:

IPRI_HUMAN :
  • Q8IWB1
Family:
  • Belongs to the ITPRIP family.
genes like me logo Genes that share domains with ITPRIP: view

No data available for Gene Families for ITPRIP Gene

Function for ITPRIP Gene

Molecular function for ITPRIP Gene

UniProtKB/Swiss-Prot Function: Enhances Ca(2+)-mediated inhibition of inositol 1,4,5-triphosphate receptor (ITPR) Ca(2+) release.
genes like me logo Genes that share phenotypes with ITPRIP: view

Animal Models for ITPRIP Gene

MGI Knock Outs for ITPRIP:

miRNA for ITPRIP Gene

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Transcription Factor Targeting and HOMER Transcription for ITPRIP Gene

Localization for ITPRIP Gene

Subcellular locations from UniProtKB/Swiss-Prot for ITPRIP Gene

Cell membrane.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ITPRIP Gene COMPARTMENTS Subcellular localization image for ITPRIP gene
Compartment Confidence
plasma membrane 5
cytosol 1
endoplasmic reticulum 1
extracellular 1
golgi apparatus 1
lysosome 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for ITPRIP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with ITPRIP: view

Pathways for ITPRIP Gene

SuperPathways for ITPRIP Gene

No Data Available

Interacting Proteins for ITPRIP Gene

Gene Ontology (GO) - Biological Process for ITPRIP Gene

None

No data available for Pathways by source for ITPRIP Gene

Transcripts for ITPRIP Gene

Unigene Clusters for ITPRIP Gene

Inositol 1,4,5-trisphosphate receptor interacting protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ITPRIP Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c
SP1: -
SP2:
SP3: - - -

Relevant External Links for ITPRIP Gene

GeneLoc Exon Structure for
ITPRIP
ECgene alternative splicing isoforms for
ITPRIP

Expression for ITPRIP Gene

mRNA expression in normal human tissues for ITPRIP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ITPRIP Gene

This gene is overexpressed in Whole Blood (7.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ITPRIP Gene

SOURCE GeneReport for Unigene cluster for ITPRIP Gene Hs.523252

mRNA Expression by UniProt/SwissProt for ITPRIP Gene

Q8IWB1-IPRI_HUMAN
Tissue specificity: Detected in brain where it is concentrated in cerebellar Purkinje cells (at protein level).
genes like me logo Genes that share expressions with ITPRIP: view

Orthologs for ITPRIP Gene

This gene was present in the common ancestor of chordates.

Orthologs for ITPRIP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ITPRIP 35
  • 99.63 (n)
  • 99.63 (a)
ITPRIP 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ITPRIP 35
  • 87.51 (n)
  • 87.02 (a)
ITPRIP 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ITPRIP 35
  • 87.34 (n)
  • 86.97 (a)
ITPRIP 36
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Itprip 35
  • 81.68 (n)
  • 78.68 (a)
Itprip 16
Itprip 36
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ITPRIP 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ITPRIP 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100912218 35
  • 82.63 (n)
  • 81.28 (a)
chicken
(Gallus gallus)
Aves ITPRIP 35
  • 65.56 (n)
  • 59.81 (a)
ITPRIP 36
  • 59 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ITPRIP 36
  • 55 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia itprip 35
  • 59.8 (n)
  • 56.37 (a)
zebrafish
(Danio rerio)
Actinopterygii itprip 35
  • 54.95 (n)
  • 49.22 (a)
itprip 36
  • 45 (a)
OneToOne
Species with no ortholog for ITPRIP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ITPRIP Gene

ENSEMBL:
Gene Tree for ITPRIP (if available)
TreeFam:
Gene Tree for ITPRIP (if available)

Paralogs for ITPRIP Gene

Paralogs for ITPRIP Gene

Selected SIMAP similar genes for ITPRIP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ITPRIP: view

Variants for ITPRIP Gene

Sequence variations from dbSNP and Humsavar for ITPRIP Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs276198 -- 104,319,698(-) ACTGA(A/G)CCCCA intron-variant
rs276199 -- 104,319,434(-) AAGGA(A/G)GAGAA intron-variant
rs276208 -- 104,312,697(+) CACCA(A/C/G/T)GAATT utr-variant-3-prime
rs276209 -- 104,312,769(+) GGGGA(C/G/T)GGGGG utr-variant-3-prime
rs276211 -- 104,339,099(-) GAAAC(A/C)CCTTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ITPRIP Gene

Variant ID Type Subtype PubMed ID
esv1968684 CNV Deletion 18987734

Relevant External Links for ITPRIP Gene

HapMap Linkage Disequilibrium report
ITPRIP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ITPRIP Gene

Disorders for ITPRIP Gene

Relevant External Links for ITPRIP

Genetic Association Database (GAD)
ITPRIP
Human Genome Epidemiology (HuGE) Navigator
ITPRIP
genes like me logo Genes that share disorders with ITPRIP: view

No data available for UniProtKB/Swiss-Prot for ITPRIP Gene

Publications for ITPRIP Gene

  1. Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 11214970) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4
  2. DANGER, a novel regulatory protein of inositol 1,4,5-trisphosphate- receptor activity. (PMID: 16990268) van Rossum D.B. … Snyder S.H. (J. Biol. Chem. 2006) 2 3 4
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  5. A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease. (PMID: 16385451) Grupe A. … Goate A. (Am. J. Hum. Genet. 2006) 3 48

Products for ITPRIP Gene

Sources for ITPRIP Gene

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