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Aliases for ITPKB-AS1 Gene

Subcategory (RNA class) for ITPKB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITPKB-AS1 Gene

  • ITPKB Antisense RNA 1 2 3 5
  • ITPKB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ITPKB-AS1 Gene

Previous GeneCards Identifiers for ITPKB-AS1 Gene

  • GC00U933698
  • GC01P226857

Summaries for ITPKB-AS1 Gene

GeneCards Summary for ITPKB-AS1 Gene

ITPKB-AS1 (ITPKB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ITPKB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPKB-AS1 Gene

Genomics for ITPKB-AS1 Gene

GeneHancer (GH) Regulatory Elements for ITPKB-AS1 Gene

Promoters and enhancers for ITPKB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I226708 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +42.7 42715 6.6 PKNOX1 FOXA2 FEZF1 ZNF2 IRF4 YY1 ZNF213 ZNF302 ZNF143 FOS ZNF678 ACBD3 CDC42BPA ITPKB ACBD3-AS1 ITPKB-AS1 LINC01703 ENSG00000272562 LOC105373117 GC01M226732
GH01I226686 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 12.7 +21.1 21091 8 CTCF JUN ZSCAN4 SIN3A EBF1 ZIC2 NR2F2 JUND POLR2A IKZF1 ITPKB ITPKB-AS1 STUM LOC105373117 ITPKB-IT1
GH01I226632 Enhancer 1.1 ENCODE dbSUPER 11.4 -34.5 -34529 3.4 HDGF PKNOX1 ZNF2 ZNF121 GLIS2 ARID2 ZNF207 ZNF143 ATF7 DEK CDC42BPA ZNF678 LINC01703 ITPKB ITPKB-AS1 PSEN2 ENAH STUM GC01P226605
GH01I226637 Enhancer 0.8 ENCODE dbSUPER 11.4 -30.7 -30731 1.2 CTCF KLF1 PHF21A L3MBTL2 REST RAD21 CTBP1 GLIS1 CREM MAFK ITPKB ITPKB-AS1 STUM GC01P226605
GH01I226601 Enhancer 0.8 Ensembl ENCODE 10.1 -65.1 -65104 3.8 KLF1 PKNOX1 ZNF449 HLF ZNF398 ZIC2 ZNF335 ZFHX2 GLIS2 EGR1 STUM ITPKB ITPKB-AS1 COQ8A GC01P226605 GC01P226597
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ITPKB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ITPKB-AS1 Gene

Genomic Locations for ITPKB-AS1 Gene
chr1:226,668,897-226,676,345
(GRCh38/hg38)
Size:
7,449 bases
Orientation:
Plus strand
chr1:226,856,598-226,864,046
(GRCh37/hg19)

Genomic View for ITPKB-AS1 Gene

Genes around ITPKB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITPKB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITPKB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ITPKB-AS1 Gene

Proteins for ITPKB-AS1 Gene

Post-translational modifications for ITPKB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITPKB-AS1 Gene

Domains & Families for ITPKB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITPKB-AS1 Gene

Function for ITPKB-AS1 Gene

Phenotypes From GWAS Catalog for ITPKB-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITPKB-AS1 Gene

Localization for ITPKB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ITPKB-AS1 Gene

Pathways & Interactions for ITPKB-AS1 Gene

SuperPathways for ITPKB-AS1 Gene

No Data Available

Interacting Proteins for ITPKB-AS1 Gene

Gene Ontology (GO) - Biological Process for ITPKB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITPKB-AS1 Gene

Drugs & Compounds for ITPKB-AS1 Gene

No Compound Related Data Available

Transcripts for ITPKB-AS1 Gene

mRNA/cDNA for ITPKB-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ITPKB-AS1 Gene

No ASD Table

Relevant External Links for ITPKB-AS1 Gene

GeneLoc Exon Structure for
ITPKB-AS1
ECgene alternative splicing isoforms for
ITPKB-AS1

Expression for ITPKB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ITPKB-AS1 Gene

genes like me logo Genes that share expression patterns with ITPKB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ITPKB-AS1 Gene

Orthologs for ITPKB-AS1 Gene

Evolution for ITPKB-AS1 Gene

ENSEMBL:
Gene Tree for ITPKB-AS1 (if available)
TreeFam:
Gene Tree for ITPKB-AS1 (if available)

No data available for Orthologs for ITPKB-AS1 Gene

Paralogs for ITPKB-AS1 Gene

No data available for Paralogs for ITPKB-AS1 Gene

Variants for ITPKB-AS1 Gene

Additional Variant Information for ITPKB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITPKB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITPKB-AS1 Gene

Disorders for ITPKB-AS1 Gene

No disorders were found for ITPKB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITPKB-AS1 Gene

Publications for ITPKB-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 58

Products for ITPKB-AS1 Gene

Sources for ITPKB-AS1 Gene

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