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Aliases for ITPKB-AS1 Gene

Subcategory (RNA class) for ITPKB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITPKB-AS1 Gene

  • ITPKB Antisense RNA 1 2 3 5
  • ITPKB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ITPKB-AS1 Gene

Previous GeneCards Identifiers for ITPKB-AS1 Gene

  • GC00U933698
  • GC01P226857

Summaries for ITPKB-AS1 Gene

GeneCards Summary for ITPKB-AS1 Gene

ITPKB-AS1 (ITPKB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPKB-AS1 Gene

Genomics for ITPKB-AS1 Gene

Regulatory Elements for ITPKB-AS1 Gene

Enhancers for ITPKB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F226686 1.6 FANTOM5 Ensembl ENCODE 12.7 +21.1 21089 8.0 ATF1 PKNOX1 SIN3A GLI4 GLIS2 FOS ZNF263 SP3 JUNB ZHX2 ITPKB ITPKB-AS1 STUM LOC105373117 ITPKB-IT1
GH01F226640 0.6 ENCODE 12.1 -28.2 -28191 1.1 CREB3L1 ZNF2 ZNF121 GLIS2 ELK1 ZNF143 ZNF207 KLF7 KDM4B DEK ITPKB-AS1 ITPKB COQ8A STUM GC01P226605
GH01F226708 1.4 FANTOM5 Ensembl ENCODE 11.7 +42.7 42716 6.6 PKNOX1 ZNF133 SIN3A FEZF1 GLI4 ZNF2 YY1 ZNF121 ZNF302 FOS ITPKB ACBD3 ITPKB-AS1 LOC105373117 GC01M226732
GH01F226632 1.2 Ensembl ENCODE 11.4 -34.5 -34529 3.4 HDGF PKNOX1 SIN3A FEZF1 ZNF2 ZNF121 GLIS2 ZNF143 ZNF207 FOS ITPKB ITPKB-AS1 STUM GC01P226605
GH01F226637 0.7 ENCODE 11.4 -30.7 -30731 1.2 CTCF KLF1 PKNOX1 RAD21 EED ZNF143 ETV6 CREM MAFK MTA2 ITPKB ITPKB-AS1 STUM GC01P226605
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ITPKB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITPKB-AS1 Gene

Chromosome:
1
Start:
226,668,897 bp from pter
End:
226,676,345 bp from pter
Size:
7,449 bases
Orientation:
Plus strand

Genomic View for ITPKB-AS1 Gene

Genes around ITPKB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITPKB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITPKB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ITPKB-AS1 Gene

Proteins for ITPKB-AS1 Gene

Post-translational modifications for ITPKB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITPKB-AS1 Gene

Domains & Families for ITPKB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITPKB-AS1 Gene

Function for ITPKB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITPKB-AS1 Gene

Localization for ITPKB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITPKB-AS1 Gene

Pathways & Interactions for ITPKB-AS1 Gene

SuperPathways for ITPKB-AS1 Gene

No Data Available

Interacting Proteins for ITPKB-AS1 Gene

Gene Ontology (GO) - Biological Process for ITPKB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITPKB-AS1 Gene

Transcripts for ITPKB-AS1 Gene

mRNA/cDNA for ITPKB-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ITPKB-AS1 Gene

No ASD Table

Relevant External Links for ITPKB-AS1 Gene

GeneLoc Exon Structure for
ITPKB-AS1
ECgene alternative splicing isoforms for
ITPKB-AS1

Expression for ITPKB-AS1 Gene

mRNA expression in normal human tissues for ITPKB-AS1 Gene

genes like me logo Genes that share expression patterns with ITPKB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ITPKB-AS1 Gene

Orthologs for ITPKB-AS1 Gene

Evolution for ITPKB-AS1 Gene

ENSEMBL:
Gene Tree for ITPKB-AS1 (if available)
TreeFam:
Gene Tree for ITPKB-AS1 (if available)

No data available for Orthologs for ITPKB-AS1 Gene

Paralogs for ITPKB-AS1 Gene

No data available for Paralogs for ITPKB-AS1 Gene

Variants for ITPKB-AS1 Gene

Relevant External Links for ITPKB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITPKB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITPKB-AS1 Gene

Disorders for ITPKB-AS1 Gene

No disorders were found for ITPKB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITPKB-AS1 Gene

Publications for ITPKB-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 64

Products for ITPKB-AS1 Gene

Sources for ITPKB-AS1 Gene

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