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Aliases for ITPK1-AS1 Gene

Subcategory (RNA class) for ITPK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITPK1-AS1 Gene

  • ITPK1 Antisense RNA 1 2 3 5
  • ITPK1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ITPK1 Antisense RNA (Non-Protein Coding) 2 3
  • Chromosome 14 Open Reading Frame 85 2
  • Non-Protein Coding RNA 203 2
  • NCRNA00203 3
  • C14orf85 3
  • ITPK1-AS 3
  • ITPK1AS 3

External Ids for ITPK1-AS1 Gene

Previous HGNC Symbols for ITPK1-AS1 Gene

  • C14orf85
  • NCRNA00203
  • ITPK1AS
  • ITPK1-AS

Previous GeneCards Identifiers for ITPK1-AS1 Gene

  • GC14P093536

Summaries for ITPK1-AS1 Gene

GeneCards Summary for ITPK1-AS1 Gene

ITPK1-AS1 (ITPK1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ITPK1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPK1-AS1 Gene

Genomics for ITPK1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ITPK1-AS1 Gene

Promoters and enhancers for ITPK1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I093064 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -1.6 -1634 3 HDGF HDAC1 PKNOX1 ATF1 ZSCAN4 BATF IRF4 ZNF121 ZNF143 ATF7 ITPK1-AS1 GC14P093068 ITPK1 PIR52280
GH14I093098 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 13 +36.2 36169 10.1 FOXA2 RAD21 ZNF121 SCRT2 ZNF143 ATF7 IKZF2 RUNX3 EGR2 RXRA ITPK1 TMEM251 ITPK1-AS1 MOAP1 UNC79 GC14P093068
GH14I093030 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.6 -32.7 -32748 7.4 HDGF FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 TCF12 ZNF121 ITPK1-AS1 CHGA ITPK1 GC14P093068 PIR52280
GH14I093027 Enhancer 0.5 dbSUPER 12 -38.5 -38507 3.2 NFIB ZMYM3 FOS ZNF24 ITPK1-AS1 CHGA ITPK1 GC14P093068 PIR52280
GH14I093031 Enhancer 0.5 ENCODE dbSUPER 12 -36.5 -36543 0.1 ATF2 ITPK1-AS1 CHGA GC14P093068 ITPK1 PIR52280
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ITPK1-AS1 Gene

Genomic Locations for ITPK1-AS1 Gene
chr14:93,067,452-93,072,152
(GRCh38/hg38)
Size:
4,701 bases
Orientation:
Plus strand
chr14:93,533,797-93,538,497
(GRCh37/hg19)

Genomic View for ITPK1-AS1 Gene

Genes around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITPK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITPK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITPK1-AS1 Gene

Proteins for ITPK1-AS1 Gene

Post-translational modifications for ITPK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITPK1-AS1 Gene

Domains & Families for ITPK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITPK1-AS1 Gene

Function for ITPK1-AS1 Gene

Phenotypes From GWAS Catalog for ITPK1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITPK1-AS1 Gene

Localization for ITPK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ITPK1-AS1 Gene

Pathways & Interactions for ITPK1-AS1 Gene

SuperPathways for ITPK1-AS1 Gene

No Data Available

Interacting Proteins for ITPK1-AS1 Gene

Gene Ontology (GO) - Biological Process for ITPK1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITPK1-AS1 Gene

Drugs & Compounds for ITPK1-AS1 Gene

No Compound Related Data Available

Transcripts for ITPK1-AS1 Gene

mRNA/cDNA for ITPK1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ITPK1-AS1 Gene

ITPK1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ITPK1-AS1 Gene

No ASD Table

Relevant External Links for ITPK1-AS1 Gene

GeneLoc Exon Structure for
ITPK1-AS1
ECgene alternative splicing isoforms for
ITPK1-AS1

Expression for ITPK1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ITPK1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ITPK1-AS1 Gene

This gene is overexpressed in Whole Blood (x6.4).

SOURCE GeneReport for Unigene cluster for ITPK1-AS1 Gene:

Hs.612888
genes like me logo Genes that share expression patterns with ITPK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ITPK1-AS1 Gene

Orthologs for ITPK1-AS1 Gene

Evolution for ITPK1-AS1 Gene

ENSEMBL:
Gene Tree for ITPK1-AS1 (if available)
TreeFam:
Gene Tree for ITPK1-AS1 (if available)

No data available for Orthologs for ITPK1-AS1 Gene

Paralogs for ITPK1-AS1 Gene

No data available for Paralogs for ITPK1-AS1 Gene

Variants for ITPK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ITPK1-AS1 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000097100 -- 93,067,078(+) C/G upstream_transcript_variant
rs1000150147 -- 93,066,701(+) C/A upstream_transcript_variant
rs1000649012 -- 93,072,042(+) C/T non_coding_transcript_variant
rs1001290973 -- 93,065,583(+) G/A upstream_transcript_variant
rs1001357048 -- 93,069,245(+) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ITPK1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635350 CNV gain 21293372
nsv517691 CNV loss 19592680
nsv565546 CNV loss 21841781

Additional Variant Information for ITPK1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITPK1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ITPK1-AS1 Gene

Disorders for ITPK1-AS1 Gene

Additional Disease Information for ITPK1-AS1

No disorders were found for ITPK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ITPK1-AS1 Gene

Publications for ITPK1-AS1 Gene

No publications were found for ITPK1-AS1 Gene.

Products for ITPK1-AS1 Gene

Sources for ITPK1-AS1 Gene

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