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Aliases for ITPK1-AS1 Gene

Subcategory (RNA class) for ITPK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITPK1-AS1 Gene

  • ITPK1 Antisense RNA 1 2 3 5
  • ITPK1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ITPK1 Antisense RNA (Non-Protein Coding) 2 3
  • Chromosome 14 Open Reading Frame 85 2
  • Non-Protein Coding RNA 203 2
  • NCRNA00203 3
  • C14orf85 3
  • ITPK1-AS 3
  • ITPK1AS 3

External Ids for ITPK1-AS1 Gene

Previous HGNC Symbols for ITPK1-AS1 Gene

  • C14orf85
  • NCRNA00203
  • ITPK1AS
  • ITPK1-AS

Previous GeneCards Identifiers for ITPK1-AS1 Gene

  • GC14P093536

Summaries for ITPK1-AS1 Gene

GeneCards Summary for ITPK1-AS1 Gene

ITPK1-AS1 (ITPK1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ITPK1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPK1-AS1 Gene

Genomics for ITPK1-AS1 Gene

Regulatory Elements for ITPK1-AS1 Gene

Enhancers for ITPK1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H093098 1.6 FANTOM5 Ensembl ENCODE dbSUPER 13 +36.2 36169 10 FOXA2 RAD21 ZNF121 SCRT2 ZNF143 ATF7 RUNX3 IKZF2 EGR2 CEBPB ITPK1 TMEM251 ITPK1-AS1 MOAP1 UNC79 GC14P093068
GH14H093030 1.5 Ensembl ENCODE dbSUPER 12.6 -32.7 -32749 7 HDGF FOXA2 ATF1 MLX ARID4B SIN3A DMAP1 TCF12 ZNF121 GLIS2 ITPK1-AS1 CHGA ITPK1 GC14P093068 PIR52280
GH14H093031 0.6 ENCODE dbSUPER 12 -36.5 -36544 0 ATF2 ITPK1-AS1 CHGA GC14P093068 PIR52280
GH14H093027 0.5 dbSUPER 12 -38.5 -38508 3 NFIB ZMYM3 FOS ZNF24 ITPK1-AS1 CHGA ITPK1 GC14P093068 PIR52280
GH14H093064 1.4 Ensembl ENCODE dbSUPER 0.7 -1.6 -1634 3 HDAC1 HDGF PKNOX1 ATF1 TBL1XR1 ZSCAN4 BATF ZNF121 ZNF143 ATF7 GC14P093068 ITPK1-AS1 PIR52280
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITPK1-AS1 Gene

Chromosome:
14
Start:
93,067,452 bp from pter
End:
93,072,152 bp from pter
Size:
4,701 bases
Orientation:
Plus strand

Genomic View for ITPK1-AS1 Gene

Genes around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITPK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITPK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITPK1-AS1 Gene

Proteins for ITPK1-AS1 Gene

Post-translational modifications for ITPK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITPK1-AS1 Gene

Domains & Families for ITPK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITPK1-AS1 Gene

Function for ITPK1-AS1 Gene

Phenotypes From GWAS Catalog for ITPK1-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ITPK1-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITPK1-AS1 Gene

Localization for ITPK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ITPK1-AS1 Gene

Pathways & Interactions for ITPK1-AS1 Gene

SuperPathways for ITPK1-AS1 Gene

No Data Available

Interacting Proteins for ITPK1-AS1 Gene

Gene Ontology (GO) - Biological Process for ITPK1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITPK1-AS1 Gene

Drugs & Compounds for ITPK1-AS1 Gene

No Compound Related Data Available

Transcripts for ITPK1-AS1 Gene

mRNA/cDNA for ITPK1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ITPK1-AS1 Gene

ITPK1 antisense RNA 1:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ITPK1-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ITPK1-AS1 Gene

No ASD Table

Relevant External Links for ITPK1-AS1 Gene

GeneLoc Exon Structure for
ITPK1-AS1
ECgene alternative splicing isoforms for
ITPK1-AS1

Expression for ITPK1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ITPK1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ITPK1-AS1 Gene

This gene is overexpressed in Whole Blood (x6.4).

SOURCE GeneReport for Unigene cluster for ITPK1-AS1 Gene:

Hs.612888
genes like me logo Genes that share expression patterns with ITPK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ITPK1-AS1 Gene

Orthologs for ITPK1-AS1 Gene

Evolution for ITPK1-AS1 Gene

ENSEMBL:
Gene Tree for ITPK1-AS1 (if available)
TreeFam:
Gene Tree for ITPK1-AS1 (if available)

No data available for Orthologs for ITPK1-AS1 Gene

Paralogs for ITPK1-AS1 Gene

No data available for Paralogs for ITPK1-AS1 Gene

Variants for ITPK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ITPK1-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000097100 -- 93,067,078(+) CAGGA(C/G)AGTCA intron-variant, upstream-variant-2KB
rs1000150147 -- 93,066,701(+) ACCCA(A/C)CTGAC intron-variant, upstream-variant-2KB
rs1000649012 -- 93,072,042(+) TAATC(C/T)CAGCA intron-variant, nc-transcript-variant
rs1001290973 -- 93,065,583(+) CCAGG(A/G)CCCAA intron-variant, upstream-variant-2KB
rs1001357048 -- 93,069,245(+) CCCCA(C/T)AGCCT intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ITPK1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635350 CNV gain 21293372
nsv517691 CNV loss 19592680
nsv565546 CNV loss 21841781

Relevant External Links for ITPK1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITPK1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ITPK1-AS1 Gene

Disorders for ITPK1-AS1 Gene

Relevant External Links for ITPK1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ITPK1-AS1

No disorders were found for ITPK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ITPK1-AS1 Gene

Publications for ITPK1-AS1 Gene

No publications were found for ITPK1-AS1 Gene.

Products for ITPK1-AS1 Gene

Sources for ITPK1-AS1 Gene

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