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Aliases for ITPK1-AS1 Gene

Subcategory (RNA class) for ITPK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITPK1-AS1 Gene

  • ITPK1 Antisense RNA 1 2 3 5
  • ITPK1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ITPK1 Antisense RNA (Non-Protein Coding) 2 3
  • Chromosome 14 Open Reading Frame 85 2
  • Non-Protein Coding RNA 203 2
  • NCRNA00203 3
  • C14orf85 3
  • ITPK1-AS 3
  • ITPK1AS 3

External Ids for ITPK1-AS1 Gene

Previous HGNC Symbols for ITPK1-AS1 Gene

  • C14orf85
  • NCRNA00203
  • ITPK1AS
  • ITPK1-AS

Previous GeneCards Identifiers for ITPK1-AS1 Gene

  • GC14P093536

Summaries for ITPK1-AS1 Gene

GeneCards Summary for ITPK1-AS1 Gene

ITPK1-AS1 (ITPK1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITPK1-AS1 Gene

Genomics for ITPK1-AS1 Gene

Regulatory Elements for ITPK1-AS1 Gene

Enhancers for ITPK1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F093030 1.7 FANTOM5 Ensembl ENCODE 13.2 -22.9 -22851 27.6 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 YY1 CBX5 ZNF143 ITPK1-AS1 CHGA ITPK1 GC14P093068 PIR52280
GH14F093098 1.4 FANTOM5 Ensembl ENCODE 13 +36.3 36323 10.5 CTCF KLF1 IRF2 PKNOX1 CEBPG EBF1 RAD21 ZNF121 ZFHX2 POLR2A ITPK1 TMEM251 ITPK1-AS1 MOAP1 UNC79 GC14P093068
GH14F093094 0.4 Ensembl 13.2 +27.2 27249 0.6 ZFHX2 ITPK1 ITPK1-AS1 GC14P093068
GH14F093096 0.4 Ensembl 13 +29.4 29449 1.8 ZNF146 ZNF580 ITPK1 ITPK1-AS1 CHGA GC14P093068
GH14F093064 1.2 Ensembl ENCODE 0.8 -1.5 -1499 3.3 HDGF TBP HDAC1 ATF1 PKNOX1 TBL1XR1 WRNIP1 ZNF121 GATA2 SCRT2 ITPK1-AS1 GC14P093068 PIR52280
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITPK1-AS1 Gene

Chromosome:
14
Start:
93,067,452 bp from pter
End:
93,072,152 bp from pter
Size:
4,701 bases
Orientation:
Plus strand

Genomic View for ITPK1-AS1 Gene

Genes around ITPK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITPK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITPK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITPK1-AS1 Gene

Proteins for ITPK1-AS1 Gene

Post-translational modifications for ITPK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITPK1-AS1 Gene

Domains & Families for ITPK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITPK1-AS1 Gene

Function for ITPK1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITPK1-AS1 Gene

Localization for ITPK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITPK1-AS1 Gene

Pathways & Interactions for ITPK1-AS1 Gene

SuperPathways for ITPK1-AS1 Gene

No Data Available

Interacting Proteins for ITPK1-AS1 Gene

Gene Ontology (GO) - Biological Process for ITPK1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITPK1-AS1 Gene

Transcripts for ITPK1-AS1 Gene

mRNA/cDNA for ITPK1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ITPK1-AS1 Gene

ITPK1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ITPK1-AS1 Gene

No ASD Table

Relevant External Links for ITPK1-AS1 Gene

GeneLoc Exon Structure for
ITPK1-AS1
ECgene alternative splicing isoforms for
ITPK1-AS1

Expression for ITPK1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ITPK1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ITPK1-AS1 Gene

This gene is overexpressed in Whole Blood (x6.4).

SOURCE GeneReport for Unigene cluster for ITPK1-AS1 Gene:

Hs.612888
genes like me logo Genes that share expression patterns with ITPK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ITPK1-AS1 Gene

Orthologs for ITPK1-AS1 Gene

Evolution for ITPK1-AS1 Gene

ENSEMBL:
Gene Tree for ITPK1-AS1 (if available)
TreeFam:
Gene Tree for ITPK1-AS1 (if available)

No data available for Orthologs for ITPK1-AS1 Gene

Paralogs for ITPK1-AS1 Gene

No data available for Paralogs for ITPK1-AS1 Gene

Variants for ITPK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ITPK1-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs111459358 -- 93,071,597(+) TGTTT(C/G)TCTTT intron-variant, nc-transcript-variant
rs111822420 -- 93,072,616(+) TATTC(-/TT)TTTTT intron-variant, downstream-variant-500B
rs111901242 -- 93,067,220(+) ACTGA(A/G)GCCAC intron-variant, upstream-variant-2KB
rs112220873 -- 93,069,703(+) GTTCT(A/G)CCTCG intron-variant, nc-transcript-variant
rs11292611 -- 93,068,005(+) GAGGC(-/A)AAAAA intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ITPK1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635350 CNV gain 21293372
nsv517691 CNV loss 19592680
nsv565546 CNV loss 21841781

Relevant External Links for ITPK1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITPK1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ITPK1-AS1 Gene

Disorders for ITPK1-AS1 Gene

Relevant External Links for ITPK1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ITPK1-AS1

No disorders were found for ITPK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ITPK1-AS1 Gene

Publications for ITPK1-AS1 Gene

No publications were found for ITPK1-AS1 Gene.

Products for ITPK1-AS1 Gene

Sources for ITPK1-AS1 Gene

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