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Aliases for ITM2BP1 Gene

Subcategory (RNA class) for ITM2BP1 Gene

antisense

Aliases for ITM2BP1 Gene

  • Integral Membrane Protein 2B Pseudogene 1 2 3 5
  • Integral Membrane Protein 2B Pseudogene 2
  • HsT33912 3
  • ITM2BP 3

External Ids for ITM2BP1 Gene

ORGUL Members for ITM2BP1 Gene

Previous HGNC Symbols for ITM2BP1 Gene

  • ITM2BP

Previous GeneCards Identifiers for ITM2BP1 Gene

  • GC17U901287
  • GC17M025941

Summaries for ITM2BP1 Gene

GeneCards Summary for ITM2BP1 Gene

ITM2BP1 (Integral Membrane Protein 2B Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITM2BP1 Gene

Genomics for ITM2BP1 Gene

Regulatory Elements for ITM2BP1 Gene

Enhancers for ITM2BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F027347 1.5 FANTOM5 Ensembl ENCODE 32.8 +264.1 264130 2.6 SREBF2 ZFP64 SIN3A RAD21 GLIS2 ZNF143 ZNF207 ZNF202 REST ZNF518A ITM2BP1 WSB1 IFT20 LGALS9 LOC100132972 ENSG00000266313
GH17F027237 1 FANTOM5 ENCODE 25.3 +371.0 371012 8.8 PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A YY1 ZNF143 FOS SP3 SP5 WSB1 ITM2BP1 LGALS9 ENSG00000265246 RPL34P31
GH17F028226 0.4 ENCODE 23.3 -614.5 -614451 2.8 SIN3A ZNF2 GLIS2 ZNF302 KLF7 ZNF548 SP3 REST ZNF623 ZNF264 ENSG00000264577 ITM2BP1 LOC101927018 ENSG00000264029 LOC100420408 ENSG00000265788 NOS2P1 LOC105371715 NDUFS5P7 LOC105371716
GH17F028466 0.7 ENCODE 16.1 -853.4 -853407 0.2 BCOR HDAC1 TAL1 ZMYM3 ZNF175 GTF3C2 NCOR1 NR2F6 TRIM24 SMARCE1 ENSG00000264577 ENSG00000265205 ITM2BP1 NUFIP2 ENSG00000265908 LOC101927018 MIR4723 PHF12 GC17P028468 GC17P028469
GH17F027292 0.8 FANTOM5 ENCODE 16.1 +317.9 317858 4.8 HDGF PKNOX1 ARNT MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ITM2BP1 TBC1D3P5 PIR52156 PIR61936
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ITM2BP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITM2BP1 Gene

Chromosome:
17
Start:
27,612,573 bp from pter
End:
27,613,251 bp from pter
Size:
679 bases
Orientation:
Minus strand

Genomic View for ITM2BP1 Gene

Genes around ITM2BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITM2BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITM2BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITM2BP1 Gene

Proteins for ITM2BP1 Gene

Post-translational modifications for ITM2BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITM2BP1 Gene

Domains & Families for ITM2BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITM2BP1 Gene

Function for ITM2BP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITM2BP1 Gene

Localization for ITM2BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITM2BP1 Gene

Pathways & Interactions for ITM2BP1 Gene

SuperPathways for ITM2BP1 Gene

No Data Available

Interacting Proteins for ITM2BP1 Gene

Gene Ontology (GO) - Biological Process for ITM2BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITM2BP1 Gene

Transcripts for ITM2BP1 Gene

mRNA/cDNA for ITM2BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ITM2BP1 Gene

No ASD Table

Relevant External Links for ITM2BP1 Gene

GeneLoc Exon Structure for
ITM2BP1
ECgene alternative splicing isoforms for
ITM2BP1

Expression for ITM2BP1 Gene

mRNA expression in normal human tissues for ITM2BP1 Gene

mRNA differential expression in normal tissues according to GTEx for ITM2BP1 Gene

This gene is overexpressed in Pancreas (x7.5).

NURSA nuclear receptor signaling pathways regulating expression of ITM2BP1 Gene:

ITM2BP1
genes like me logo Genes that share expression patterns with ITM2BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ITM2BP1 Gene

Orthologs for ITM2BP1 Gene

Evolution for ITM2BP1 Gene

ENSEMBL:
Gene Tree for ITM2BP1 (if available)
TreeFam:
Gene Tree for ITM2BP1 (if available)

No data available for Orthologs for ITM2BP1 Gene

Paralogs for ITM2BP1 Gene

No data available for Paralogs for ITM2BP1 Gene

Variants for ITM2BP1 Gene

Relevant External Links for ITM2BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITM2BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITM2BP1 Gene

Disorders for ITM2BP1 Gene

No disorders were found for ITM2BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITM2BP1 Gene

Publications for ITM2BP1 Gene

No publications were found for ITM2BP1 Gene.

Products for ITM2BP1 Gene

Sources for ITM2BP1 Gene

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