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Aliases for ITM2BP1 Gene

Subcategory (RNA class) for ITM2BP1 Gene

antisense

Aliases for ITM2BP1 Gene

  • Integral Membrane Protein 2B Pseudogene 1 2 3 5
  • Integral Membrane Protein 2B Pseudogene 2
  • HsT33912 3
  • ITM2BP 3

External Ids for ITM2BP1 Gene

ORGUL Members for ITM2BP1 Gene

Previous HGNC Symbols for ITM2BP1 Gene

  • ITM2BP

Previous GeneCards Identifiers for ITM2BP1 Gene

  • GC17U901287
  • GC17M025941

Summaries for ITM2BP1 Gene

GeneCards Summary for ITM2BP1 Gene

ITM2BP1 (Integral Membrane Protein 2B Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITM2BP1 Gene

Genomics for ITM2BP1 Gene

Regulatory Elements for ITM2BP1 Gene

Enhancers for ITM2BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G027292 1.7 FANTOM5 ENCODE dbSUPER 16.1 +317.9 317858 4.8 MLX CREB3L1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D ITM2BP1 TBC1D3P5 PIR52156 PIR61936
GH17G027351 1.7 FANTOM5 ENCODE dbSUPER 12.8 +260.0 260011 3.4 HDGF PKNOX1 CREB3L1 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 ITM2BP1 WSB1 LGALS9 SYPL1P2 GC17M027350
GH17G028333 1.4 ENCODE dbSUPER 12.7 -723.6 -723616 5.9 HDGF PKNOX1 FOXA2 MLX CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ITM2BP1 TMEM97 RPL23A NEK8 POLDIP2 NUFIP2 ENSG00000264577 ENSG00000265474 VTN TNFAIP1
GH17G028466 1.1 ENCODE dbSUPER 16.1 -853.4 -853407 0.2 BCOR HDAC1 FOXA2 TAL1 ZNF175 ZMYM3 CEBPG FOSL1 TCF12 GTF3C2 ENSG00000264577 ENSG00000265205 ITM2BP1 NUFIP2 ENSG00000265908 LOC101927018 TMEM199 PHF12 GC17P028468 GC17P028469
GH17G027331 1.7 FANTOM5 ENCODE dbSUPER 10.4 +280.3 280280 3.3 HDGF PKNOX1 MLX CREB3L1 ARNT WRNIP1 ARID4B SIN3A YBX1 DMAP1 WSB1 ITM2BP1 LGALS9 ENSG00000266313 GC17P027315
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ITM2BP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITM2BP1 Gene

Chromosome:
17
Start:
27,612,573 bp from pter
End:
27,613,251 bp from pter
Size:
679 bases
Orientation:
Minus strand

Genomic View for ITM2BP1 Gene

Genes around ITM2BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITM2BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITM2BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ITM2BP1 Gene

Proteins for ITM2BP1 Gene

Post-translational modifications for ITM2BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITM2BP1 Gene

Domains & Families for ITM2BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITM2BP1 Gene

Function for ITM2BP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITM2BP1 Gene

Localization for ITM2BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITM2BP1 Gene

Pathways & Interactions for ITM2BP1 Gene

SuperPathways for ITM2BP1 Gene

No Data Available

Interacting Proteins for ITM2BP1 Gene

Gene Ontology (GO) - Biological Process for ITM2BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITM2BP1 Gene

Transcripts for ITM2BP1 Gene

mRNA/cDNA for ITM2BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ITM2BP1 Gene

No ASD Table

Relevant External Links for ITM2BP1 Gene

GeneLoc Exon Structure for
ITM2BP1
ECgene alternative splicing isoforms for
ITM2BP1

Expression for ITM2BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ITM2BP1 Gene

mRNA differential expression in normal tissues according to GTEx for ITM2BP1 Gene

This gene is overexpressed in Pancreas (x7.5).

NURSA nuclear receptor signaling pathways regulating expression of ITM2BP1 Gene:

ITM2BP1
genes like me logo Genes that share expression patterns with ITM2BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ITM2BP1 Gene

Orthologs for ITM2BP1 Gene

Evolution for ITM2BP1 Gene

ENSEMBL:
Gene Tree for ITM2BP1 (if available)
TreeFam:
Gene Tree for ITM2BP1 (if available)

No data available for Orthologs for ITM2BP1 Gene

Paralogs for ITM2BP1 Gene

No data available for Paralogs for ITM2BP1 Gene

Variants for ITM2BP1 Gene

Relevant External Links for ITM2BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITM2BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITM2BP1 Gene

Disorders for ITM2BP1 Gene

No disorders were found for ITM2BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITM2BP1 Gene

Publications for ITM2BP1 Gene

No publications were found for ITM2BP1 Gene.

Products for ITM2BP1 Gene

Sources for ITM2BP1 Gene

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