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Aliases for ITGB5-AS1 Gene

Subcategory (RNA class) for ITGB5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ITGB5-AS1 Gene

  • ITGB5 Antisense RNA 1 2 3 5
  • ITGB5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ITGB5-AS1 Gene

Previous GeneCards Identifiers for ITGB5-AS1 Gene

  • GC00U933617
  • GC03P124501

Summaries for ITGB5-AS1 Gene

GeneCards Summary for ITGB5-AS1 Gene

ITGB5-AS1 (ITGB5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITGB5-AS1 Gene

Genomics for ITGB5-AS1 Gene

Regulatory Elements for ITGB5-AS1 Gene

Enhancers for ITGB5-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F124829 1.2 FANTOM5 Ensembl ENCODE 11.8 +53.8 53751 11.4 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 CBX5 ZNF143 ITGB5 UMPS ITGB5-AS1 KALRN ENO1P3 ENSG00000280042
GH03F124826 0.9 Ensembl ENCODE 11.7 +46.4 46354 2.5 BRD4 CTCF ARNT ETV1 TEAD4 RAD21 TEAD3 GATA3 FOS TEAD1 ITGB5 ITGB5-AS1 ENSG00000280042 ENO1P3
GH03F124824 0.5 ENCODE 11.6 +43.3 43344 0.1 GATA3 JUND FOS EP300 TCF7L2 ITGB5-AS1 ITGB5 ENSG00000280042 ENO1P3
GH03F124858 1.1 Ensembl ENCODE 11.3 +78.9 78946 4.6 TBP HDAC1 PKNOX1 ZNF133 SIN3A YY1 RFX5 RCOR1 FOS CREM ITGB5 ITGB5-AS1 ENO1P3 ENSG00000280042
GH03F124863 0.4 Ensembl 11.2 +82.2 82246 0.8 ZNF664 SPI1 ITGB5 ITGB5-AS1 ENO1P3 GC03M124774
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ITGB5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITGB5-AS1 Gene

Chromosome:
3
Start:
124,781,155 bp from pter
End:
124,787,757 bp from pter
Size:
6,603 bases
Orientation:
Plus strand

Genomic View for ITGB5-AS1 Gene

Genes around ITGB5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITGB5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITGB5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ITGB5-AS1 Gene

Proteins for ITGB5-AS1 Gene

Post-translational modifications for ITGB5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITGB5-AS1 Gene

Domains & Families for ITGB5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITGB5-AS1 Gene

Function for ITGB5-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITGB5-AS1 Gene

Localization for ITGB5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITGB5-AS1 Gene

Pathways & Interactions for ITGB5-AS1 Gene

SuperPathways for ITGB5-AS1 Gene

No Data Available

Interacting Proteins for ITGB5-AS1 Gene

Gene Ontology (GO) - Biological Process for ITGB5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ITGB5-AS1 Gene

Transcripts for ITGB5-AS1 Gene

mRNA/cDNA for ITGB5-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ITGB5-AS1 Gene

No ASD Table

Relevant External Links for ITGB5-AS1 Gene

GeneLoc Exon Structure for
ITGB5-AS1
ECgene alternative splicing isoforms for
ITGB5-AS1

Expression for ITGB5-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ITGB5-AS1 Gene

genes like me logo Genes that share expression patterns with ITGB5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ITGB5-AS1 Gene

Orthologs for ITGB5-AS1 Gene

Evolution for ITGB5-AS1 Gene

ENSEMBL:
Gene Tree for ITGB5-AS1 (if available)
TreeFam:
Gene Tree for ITGB5-AS1 (if available)

No data available for Orthologs for ITGB5-AS1 Gene

Paralogs for ITGB5-AS1 Gene

No data available for Paralogs for ITGB5-AS1 Gene

Variants for ITGB5-AS1 Gene

Relevant External Links for ITGB5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ITGB5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITGB5-AS1 Gene

Disorders for ITGB5-AS1 Gene

No disorders were found for ITGB5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITGB5-AS1 Gene

Publications for ITGB5-AS1 Gene

No publications were found for ITGB5-AS1 Gene.

Products for ITGB5-AS1 Gene

Sources for ITGB5-AS1 Gene

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