V3 here soon-try beta now
Gene Search (GeneCards Home) | GeneCards Guide | User Feedback | Terms of Use | Notice about third-party sites
 

ITGB3 Gene

protein-coding   GIFtS: 71

GC17P042686
integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: GP3A)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
CD61 1, 2
GP3A 2, 3, 5
GPIIIa 1, 2, 3
Descriptions
CD61 antigen 3
Platelet membrane glycoprotein IIIa 3
integrin beta chain, beta 3 2
integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 2
platelet glycoprotein IIIa 2
External Ids
HGNC: 61561
Entrez Gene: 36902
UniProtKB: P051063
Ensembl: ENSG000000563457
Search outside databases for aliases for ITGB3 gene

Previous GC identifers: GC17P044829 GC17P047729 GC17P045673 GC17P045805

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ITGB3:
The ITGB3 protein product is the integrin beta chain beta 3. Integrins are integral cell-surface
proteins composed of an alpha chain and a beta chain. A given chain may combine with multiple
partners resulting in different integrins. Integrin beta 3 is found along with the alpha IIb chain
in platelets. Integrins are known to participate in cell adhesion as well as cell-surface mediated
signalling. [provided by RefSeq]

UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106
Function: Integrin alpha-V/beta-3 is a receptor for cytotactin, fibronectin, laminin, matrix
metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin, vitronectin and von
Willebrand factor. Integrin alpha-IIb/beta-3 is a receptor for fibronectin, fibrinogen,
plasminogen, prothrombin, thrombospondin and vitronectin. Integrins alpha-IIb/beta-3 and
alpha-V/beta-3 recognize the sequence R-G-D in a wide array of ligands. Integrin alpha-IIb/beta-3
recognizes the sequence H-H-L-G-G-G-A-K-Q-A-G-D-V in fibrinogen gamma chain. Following activation
integrin alpha-IIb/beta-3 brings about platelet/platelet interaction through binding of soluble
fibrinogen. This step leads to rapid platelet aggregation which physically plugs ruptured
endothelial surface. In case of HIV-1 infection, the interaction with extracellular viral Tat
protein seems to enhance angiogenesis in Kaposi's sarcoma lesions

Gene Wiki entry for ITGB3 (CD61)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ITGB3 gene  

Entrez Gene cytogenetic band: 17q21.32   Ensembl cytogenetic band:  17q21.32   HGNC cytogenetic band: 17q21.32

ITGB3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P042686:     (about GC identifiers)

Start:
42,686,207 bp from pter
End:
42,745,076 bp from pter
Size:
58,870 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000017.9  NT_010783.14  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106 (See protein sequence)
Recommended Name: Integrin beta-3 precursor  
Size: 788 amino acids; 87058 Da
Subunit: Heterodimer of an alpha and a beta subunit. Beta-3 associates with either alpha-IIb or
alpha-V. Isoform Beta-3C interacts with FLNB. Interacts with HIV-1 Tat
Subcellular location: Membrane; Single-pass type I membrane protein
PDB structures from and Proteopedia :
1JV2 (3D)    1KUP (3D)    1KUZ (3D)    1L5G (3D)    1M1X (3D)    1M8O (3D)    1MK7 (3D)    1MK9 (3D)    
1RN0 (3D)    1S4X (3D)    1TYE (3D)    1U8C (3D)    2INI (3D)    2K9J (3D)    2Q6W (3D)    2RMZ (3D)    
2RN0 (3D)    2VC2 (3D)    2VDK (3D)    2VDL (3D)    2VDM (3D)    2VDN (3D)    2VDO (3D)    2VDP (3D)    
2VDQ (3D)    2VDR (3D)    3FCS (3D)    3FCU (3D)    
Secondary accessions: A0PJW2 O15495 Q12806 Q13413 Q14648 Q16499
Alternative splicing: 3 isoforms:  P05106-1   P05106-2   P05106-3   

Post-translational modifications:

  • Phosphorylated on tyrosine residues in response to thrombin-induced platelet aggregation. Probably
    involved in outside-in signaling. A peptide (AA 740-762) is capable of binding GRB2 only when both
    Tyr-773 and Tyr-785 are phosphorylated. Phosphorylation of Thr-779 inhibits SHC binding1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_000203.2  

    ENSEMBL proteins: 
    ENSP00000262017 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Millipore Purified and/or Recombinant ITGB3 Protein
    Sigma-Aldrich CompoZr ZFN for ITGB3  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Integrin alpha V beta 3, Integrin beta 3, CD51 + CD61, Integrin alpha 2b + beta 3)
    Browse Abnova for Human Recombinant Proteins
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    4 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886 plasma membrane EXP3607284 10605720
    GO:0008305 integrin complex TAS1438206
    GO:0009897 external side of plasma membrane IEA--
    GO:0031092 platelet alpha granule membrane EXP3607284
    About this table

    Antibodies for ITGB3: 
    Invitrogen Antibodies for ITGB3
    Millipore Mono- and Polyclonal Antibodies for the study of ITGB3
    Sigma-Aldrich Antibodies for ITGB3
    R&D Systems Antibodies for ITGB3 (Integrin beta 6, Integrin beta 3/CD61)
    Cell Signaling Technology (CST) Antibodies for ITGB3  (Integrin B3)
    Antibodies from Abcam (Integrin alpha V beta 3, Integrin beta 3, CD51 + CD61, Integrin alpha 2b + beta 3), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (ITGB3)
    Novus Biologicals Antibodies for ITGB3

    Assays for ITGB3: 
    Browse Invitrogen for biochemical assays
    Millipore Kits and Assays for the Analysis of ITGB3
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/11 InterPro domains/families (see all 11 ):
     IPR003659 Plexin-like
     IPR002369 Integrin_bsu_N
     IPR012896 Integrin_bsu_tail
     IPR015435 Integrin_bsu-3_C
     IPR013032 EGF-like_reg_CS


       GeneDecks  ITGB3 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P05106

    ProtoNet protein and cluster: P05106

    3 Blocks protein families:
    IPB001169 Integrin beta
    IPB002035 Von Willebrand factor type A domain signature
    IPB002369 Integrin beta subunit signature


    UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106
    Similarity: Belongs to the integrin beta chain family
    Similarity: Contains 1 VWFA domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGB3)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGB3)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000212

                  Applied Biosystems Silencer® siRNAs for ITGB3

                  Sigma-Aldrich siRNA and siRNA Panels for ITGB3  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGB3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_000212
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_000212
                                     untagged cDNA clone in CMV expression vector: NM_000212 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_000212

    UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106
    Function: Integrin alpha-V/beta-3 is a receptor for cytotactin, fibronectin, laminin, matrix
    metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin, vitronectin and von
    Willebrand factor. Integrin alpha-IIb/beta-3 is a receptor for fibronectin, fibrinogen,
    plasminogen, prothrombin, thrombospondin and vitronectin. Integrins alpha-IIb/beta-3 and
    alpha-V/beta-3 recognize the sequence R-G-D in a wide array of ligands. Integrin alpha-IIb/beta-3
    recognizes the sequence H-H-L-G-G-G-A-K-Q-A-G-D-V in fibrinogen gamma chain. Following activation
    integrin alpha-IIb/beta-3 brings about platelet/platelet interaction through binding of soluble
    fibrinogen. This step leads to rapid platelet aggregation which physically plugs ruptured
    endothelial surface. In case of HIV-1 infection, the interaction with extracellular viral Tat
    protein seems to enhance angiogenesis in Kaposi's sarcoma lesions

    Genatlas biochemistry entry for ITGB3:
    integrin,beta 3,platelet glycoprotein IIIa,Pen alloantigen,Sra alloantigen,involved in neonatal
    alloimmune thrombocytopenia and post-transfusion purpura,cell surface adhesion receptor mediating
    cell-adhesion to extra cellular matrix or to other cells,through hetero dimerization and
    connecting to the cytoskeleton and various signaling molecules within cells,contributor,in
    association with PAI1 in susceptibility to myocardial infarction in Finnish population (see PAI1)

    15 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Itgb3):

    digestive/alimentaryembryogenesishematopoietic systemhomeostasis/metabolism
    immune systemlethality-postnatallethality-prenatal/perinatallife span-post-weaning/agingliver/biliary system
    normalrenal/urinary systemreproductive systemskin/coat/nailsvision/eye

    3 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872 receptor activity IEA--
    GO:0005178 integrin binding IEA--
    GO:0042802 identical protein binding IPI11606749
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/10 Invitrogen iPath™ Online BioAtlas - Pathways for ITGB3 (see all 10 ) (Maps provided by GeneGo):
     Integrin-mediated cell-matrix adhesion
     Putative integrins pathway. Part 2
     Regulation of apoptosis by mitochondrial proteins
     Cytoplasm/mitochondrial transport of proapoptotic proteins Bad and Bax
     Interactions of Integrins with extracellular matrix

       GeneDecks  ITGB3 for the pathways selected above  
    About GeneDecksing

    5 Millipore Pathways for ITGB3
     Cytoskeleton remodeling Integrin outside-in signaling
     Development VEGF-family signaling
     Cytoskeleton remodeling Fibronectin-binding integrins in cell motility
     Cell adhesion Integrin inside-out signaling
     Cell adhesion Endothelial cell contacts by non-junctional mechanisms

       GeneDecks  ITGB3 for the pathways selected above  
    About GeneDecksing

    5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for  ITGB3  (Your Favorite Gene powered by Ingenuity) (see all 8
     Clathrin-mediated Endocytosis
     Virus Entry via Endocytic Pathways
     NF-&kappa
     Macropinocytosis
     Agrin Interactions at Neuromuscular Junction

       GeneDecks  ITGB3 for the pathways selected above  
    About GeneDecksing

    4 Kegg Pathways  (Kegg details for ITGB3):
     hsa04510 Focal adhesion
     hsa04512 ECM-receptor interaction
     hsa04640 Hematopoietic cell lineage
     hsa04810 Regulation of actin cytoskeleton

       GeneDecks  ITGB3 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  ITGB3 


    5/238 Interacting proteins for ITGB3 (P051061, 2 ENSP000002620173) via UniProtKB, MINT, and/or STRING (see all 238 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TLN1Q9Y4902, ENSP000003160293MINT-1795071 MINT-1795026 MINT-2793444 MINT-1795056 STRING (score=.999)
    PTPN1P180312, ENSP000003606833MINT-6794826 MINT-6794817 MINT-6795286 MINT-6794843 STRING (score=.96)
    SRCP129312, ENSP000003626593MINT-6795286 MINT-6794843 STRING (score=.998)
    Tln1 Tln1 (xeno)P260391, 2EBI-702847, EBI-1039593 MINT-45952
    ITGAVP067561, 2, ENSP000003640423EBI-702847, EBI-298282 MINT-25081 EBI-702847, EBI-298282 MINT-25081 STRING (score=.999)
    About this table

    5/11 Gene Ontology (GO) biological process terms (links to tree view) (see all 11 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007044 cell-substrate junction assembly IEA--
    GO:0007155 cell adhesion TAS2452834 10429193
    GO:0007160 cell-matrix adhesion IEA--
    GO:0007229 integrin-mediated signaling pathway IEA--
    GO:0007596 blood coagulation TAS1438206
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Sigma-Aldrich Small Molecules for ITGB3:
    Mixed Agonist/Antagonist Antagonist

    Compounds for ITGB3 available from Tocris Bioscience
    CompoundAction CAS number
    RGDS peptideIntegrin binding sequence; inhibits integrin receptor function[91037-65-9]
    MNSSelective inhibitor of Src and Syk[1485-00-3]
    Echistatin, alpha1 isoformalphaVbeta3 and glycoprotein IIb/IIIa (alphaIIbbeta3) inhibitor[154303-05-6]
    GR 144053 trihydrochlorideGlycoprotein IIb/IIIa (alphaIIbbeta3) receptor antagonist. Antithrombotic[201304-22-5]
    About this table


    10/18 Novoseek chemical compound relationships for ITGB3 gene (see all 18 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    fibrinogen 78.19 49 1706596 (4), 1957276 (3), 1705115 (2), 8317479 (2) (see all 35)
    sele 63.35 2 11714857 (1), 15076187 (1)
    adp 57.50 15 8547151 (1), 16769603 (1), 2064610 (1), 1412224 (1) (see all 7)
    1,25 dihydroxy vitamin d3 34.78 1 10913332 (1)
    tyrosine 16.21 9 8581996 (3), 8547151 (1), 7526955 (1), 10863474 (1) (see all 6)
    iron 4.50 1 9460806 (1)
    lipid 2.11 1 19350519 (1)
    cystine 1.49 1 2064610 (1)
    glucose 1.08 1 17357883 (1)
    atp 0.00 1 1650365 (1)
    About this table

    2 PharmGKB drug compound relationships for ITGB3 gene
    Drug compound PharmGKB Relations PubMed IDs for articles supporting these relationships
    aspirinCO  PD  FA  GN  9652563
    orbofibanCO  GN  11719362
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGB3)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGB3)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000212

                  Sigma-Aldrich siRNA and siRNA Panels for ITGB3  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGB3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_000212  

    REFSEQ mRNAs for ITGB3 gene: 

    NM_000212.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_000212  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_000212
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_000212
                                     untagged cDNA clone in CMV expression vector: NM_000212 

    Additional cDNA sequence: 

    AY826979.1 BC127666.1 BC127667.1 J02703.1 M20311.1 M25108.1 M35999.1 S70348.1 
    U95204.1 

    4 DOTS entries:

    DT.315192  DT.303692  DT.92425123  DT.86852546 

    24/140 AceView cDNA sequences (see all 140 ):

    BF058953 AA320129 BU628207 BM719625 BQ437000 NM_000212 BU155897 BF593562 
    BE674065 BU174383 CD364451 BM931908 M25108 R81611 BX482144 R12504 
    AA954500 BF115658 M35999 AI458981 AI139583 AA669840 M20311 AI189839 

    highest scoring ESTs for ITGB3:

    M35999 AA306373 AA320129 AA363345 AI151449 AI458981 AI470563 AI808178 AL702773 AU116912 

    Unigene Cluster for ITGB3:

    Integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
    Hs.218040  [show with all ESTs]
    Unigene Representative Sequence: NM_000212


    GeneLoc Exon Structure

    1 Ensembl transcript including schematic representation:
    ENST00000262017  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ITGB3 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ITGB3

    1 / 2 / 3

    17 probe-sets matching ITGB3 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    852_at2, 3 U95-A 1 1.00 1.00 0.71 0.82 S70348 0.80 1.00 0.91 1

    37952_at2, 3 U95-A 1 1.00 1.00 0.82 1.19 M35999 1.00 1.00 1.00 1

    1176_at2, 3 U95-A 1 1.00 1.00 0.53 1.02 HG2320-HT2416 0.20 1.00 0.72 1

    204625_s_at2, 3 U133-A 1 1.00 1.00 -- -- BF115658 0.60 1.00 0.82 1

    204627_s_at2, 3 U133-A 1 1.00 1.00 -- -- M35999 1.00 1.00 1.00 1

    216261_at2, 3 U133-A 1 1.00 1.00 -- -- AI151479 0.40 1.00 0.76 1

    211579_at2, 3 U133-A 1 1.00 1.00 -- -- U95204 0.80 1.00 0.91 1

    204628_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_000212 0.60 1.00 0.82 1

    204626_s_at2, 3 U133-A 1 1.00 1.00 -- -- J02703 0.80 1.00 0.91 1

    215240_at2, 3 U133-A 1 0.82 1.00 -- -- AI189839 0.40 1.00 0.76 1

    204625_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    204627_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    216261_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    211579_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    204628_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    204626_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    215240_at2 U133Plus2 1 0.82 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene cluster: Hs.218040

    Expression variation in blood from EXPOLDB for ITGB3

    UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106
    Tissue specificity: Isoform beta-3A and isoform beta-3C are widely expressed. Isoform beta-3A is
    specifically expressed in osteoblast cells; isoform beta-3C is specifically expressed in prostate
    and testis

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ITGB3 gene from 5/9 species (see all 9 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ITGB31   -- integrin, beta 3 (platelet glycoprotein IIIa, antigen more 91.36(n)
    95.53(a)
    403788  NM_001003162.1  NP_001003162.1 
    chimpanzee
    (Pan troglodytes)
    ITGB31   -- integrin, beta 3 (platelet glycoprotein IIIa, antigen more 99.53(n)
    99.75(a)
    468295  XM_523684.2  XP_523684.2 
    cow
    (Bos taurus)
    ITGB31   -- integrin, beta 3 (platelet glycoprotein IIIa, antigen more 90.63(n)
    95.4(a)
    282642  XM_616376.3  XP_616376.2 
    mouse
    (Mus musculus)
    Itgb31, 5 11 (68.00 cM)5
    integrin beta 31, 5 86.49(n)1
    90.66(a)1
    164161  NM_016780.11  NP_058060.11 
     AF0265095  AF0265105  (see all 16)
    chicken
    (Gallus gallus)
    ITGB31   -- integrin, beta 3 (platelet glycoprotein IIIa, antigen more 78.66(n)
    82.66(a)
    374209  NM_204315.1  NP_989646.1 
    About this table        Species with no ortholog for ITGB3

    ENSEMBL Gene Tree for ITGB3
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ITGB3 gene
    ITGB82  ITGB62  ITGB52  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section

    UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106
    Polymorphism: Position 59 is associated with platelet-specific alloantigen HPA-1 (ZW or PL(A)).
    HPA-1A/ZW(A)/PL(A1) has Leu-59 and HPA-1B/ZW(B)/PL(A2) has Pro-59
    Polymorphism: Position 169 is associated with platelet-specific alloantigen HPA-4 (PEN or YUK).
    HPA-4A/PEN(A)/YUK(A) has Arg-169 and HPA-4B/PEN(B)/YUK(B) has Gln-169. HPA-4B is involved in
    neonatal alloimmune thrombocytopenia (NAIT or NATP)
    Polymorphism: Position 433 is associated with platelet-specific alloantigen MO. MO(-) has Pro-433
    and MO(+) has Ala-433. MO(+) is involved in NAIT
    Polymorphism: Position 515 is associated with platelet-specific alloantigen CA/TU. CA(-)/TU(-) has
    Arg-515 and CA(+)/TU(+) has Gln-515. CA(+) is involved in NAIT
    Polymorphism: Position 662 is associated with platelet-specific alloantigen SR(A). SR(A)(-) has
    Arg-662 and SR(A)(+) has Cys-662


    10/380 NCBI SNPs in ITGB3 are shown (see all 380 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 156)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 17 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs23176761,2
    A,C,F,H42743282(+) CATTCA/GTGGCC 1 -- ut318Minor allele frequency- G:0.15EU EA WA NA 590
    rs38098651,2
    A,C,F,H42743585(+) CCCTGA/TGCCTT 1 -- ut31 ese316Minor allele frequency- N:0.00EA NA EU WA 2586
    rs72081701,2
    A,C,F,H42685758(+) ATTCAG/ACAGAT 1 -- ng518Minor allele frequency- A:0.34EU EA WA NA 774
    rs23173851,2
    C,F,H,O42684681(-) TATCCC/TTGCTG 1 -- ng517Minor allele frequency- T:0.34EU EA WA NA 562
    rs23173841,2
    C,F,O42684769(-) GGTTAC/TATCTC 1 -- ng513Minor allele frequency- T:0.34NA 142
    rs59171,2
    C,F,H42716952(+) GATGCG/AAAAGC 1 Q/R mis1 ese310Minor allele frequency- A:0.00MN EU EA WA 1126
    rs59181,2
    C,F,H42715729(+) GCCTCT/CGGGCT 1 P/L mis1 ese311Minor allele frequency- C:0.09MN EU EA WA NA 1038
    --
    rs99160071,2
    A,C42745471(+) gtagcC/Tgggat 1 -- ng310--------
    rs72080551,2
    C,F42685826(+) TGTGTC/ACCAAG 1 -- ng511Minor allele frequency- A:0.50NA 42
    --
    rs169418641,2
    C,F42743240(+) TTTGAC/TCTGTT 1 -- ut314Minor allele frequency- T:0.04NA 182
    About this table

    HapMap Linkage Disequilibrium images for ITGB3 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 173470

    UniProtKB/Swiss-Prot: ITB3_HUMAN, P05106

  • Defects in ITGB3 are a cause of Glanzmann thrombasthenia (GT) [MIM:273800]; also known as
    thrombasthenia of Glanzmann and Naegeli. GT is the most common inherited disease of platelets. Its
    inheritance is autosomal recessive. It is characterized by mucocutaneous bleeding of
    mild-to-moderate severity and the inability of this integrin to recognize macromolecular or
    synthetic peptide ligands. GT has been classified clinically into types I and II. In type I,
    platelets show absence of the glycoprotein IIb-IIIa complexes at their surface and lack fibrinogen
    and clot retraction capability. In type II, the platelets express the GPIIb-IIIa complex at
    reduced levels (5-20% controls), have detectable amounts of fibrinogen, and have low or moderate
    clot retraction capability. The platelets of GT variants have normal or near normal (60-100%)
    expression of dysfunctional receptors
  • 10/44 Novoseek disease relationships for ITGB3 gene (see all 44 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    glanzmann thrombasthenia 93.29 20 1635160 (1), 8201919 (1), 2014236 (1), 16463284 (1) (see all 20)
    thrombocytopenia 60.49 15 18070277 (2), 8541531 (1), 10859334 (1), 18208809 (1) (see all 11)
    coagulopathy 56.86 2 9160670 (1), 9695977 (1)
    erythroleukemia 56.40 3 8876221 (1), 7662966 (1)
    coronary thrombosis 43.00 3 10589700 (1), 11028489 (1), 10521390 (1)
    arterial thrombosis 40.13 2 15166939 (1), 16793667 (1)
    thrombosis 35.44 3 18208809 (2), 15166939 (1)
    purpura thrombocytopenic 32.72 2 10697532 (1)
    purpura thrombocytopenic idiopathic 32.60 1 17272505 (1)
    myeloproliferative disorders 28.72 1 8819897 (1)
    About this table

    4 PharmGKB disease relationships for ITGB3 gene
    Disease PharmGKB Relations PubMed IDs for articles supporting these relationships
    HemorrhageCO  GN  11719362
    IschemiaCO  GN  11719362
    Myocardial InfarctionCO  GN  11719362
    Myocardial Reperfusion InjuryCO  GN  12411794
    About this table

    Genatlas disease: ITGB3
    Glanzmann thrombasthenia (GpIIb-GpIIIa complex deficiency)

    Human Gene Mutation Database: ITGB3
    Genetic Association Database: ITGB3
    Human Genome Epidemiology Navigator: ITGB3 (189 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/809 PubMed articles for ITGB3 gene (see all 809 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 3690 HGNC: 6156 AceView: ITGB3 Ensembl:ENSG00000056345 euGenes: HUgn3690
    ECgene: ITGB3 H-InvDB: ITGB3
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for ITGB3 Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.genetests.org/query?gene=ITGB3
    SHMPDhttp://shmpd.bii.a-star.edu.sg/gene.php?genestart=A&genename=ITGB3
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for ITGB3:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
      Invitrogen Antibodies  Invitrogen Assays
      Invitrogen Clones  Invitrogen Q-PCR Products
      Invitrogen Human Recombinant Kinases  Invitrogen Custom Antibody and Peptide Service
      Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for ITGB3-related products

     Millipore Custom Antibody & Bulk Services
     Millipore Preclinical / Clinical Development Services
     Millipore Immunoassay Services
     Millipore Target Screening & Profiling Services


     Predesigned and custom siRNAs for ITGB3 Antibodies for ITGB3
     Explore super-pooled esiRNAs Proteins for ITGB3
     Lentivirus-delivered shRNAs for ITGB3 Small molecules for ITGB3
     "Your Favorite Gene" Pathwaysfeedback


      
     Antibodies   Primer Pairs  
     Cell Culture Products   ELISAs  
     Flow Cytometry Kits   Protease Activity Assays & Reagents  
     Cell Selection/Detection Kits & Reagents   ELISA/Assay Development Kits & Reagents  
     Multiplex/Array Assay Kits & Reagents   ELISpot Kits & Development Modules  
     Recombinant & Natural Proteins  

     Search for Recombinant Proteins
     Antibodies (ITGB3)
     Chimera RNAi (ITGB3)
     Custom Service for Mouse Mab
     Custom Service for Rabbit Pab from Full-length Protein
      
     Antibodies & Assays for ITGB3  (Integrin B3)

     Recombinant Proteins
    (Integrin alpha V beta 3, Integrin beta 3, CD51 + CD61, Integrin alpha 2b + beta 3)
     Antibodies (Integrin alpha V beta 3, Integrin beta 3, CD51 + CD61, Integrin alpha 2b + beta 3)
     Search OriGene for ITGB3
     Tocris compounds for ITGB3




     Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
     Antibodies for ITGB3

    GeneCards Homepage    -    Last full update: 2 Jul 2009        Incremental update: 13 Oct 2009

    Random Gene From GIFtS : about GIFtS

    Gene Index:   3   5   A   B   C   D   E   F   G   H   I   J   K   L   M   N   O   P   Q   R   S   T   U   V   W   X   Y   Z

    Developed at the Crown Human Genome Center & Weizmann Institute of Science



    The GeneCards Human Gene Database: Copyright © 1996-2009, Weizmann Institute of Science. All Rights Reserved.
    ITGB3 Gene at Home site.
    Version 2.41.1
    server4.xennexinc.com