Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ITGB1 Gene

protein-coding   GIFtS: 70
GCID: GC10M033189

Integrin, Beta 1 (Fibronectin Receptor, Beta Polypeptide,...


(Previous symbols: FNRB, MSK12, MDF2)
Microbiology & Infectious Diseases Congress
  144 related diseases
at
MalaCards
 

Aliases
for ITGB1 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section
Aliases
Integrin, Beta 1 (Fibronectin Receptor, Beta Polypeptide, Antigen CD29
Includes MDF2, MSK12)1 2
     VLAB2
FNRB1 2 3 5     Integrin Beta-12
MDF21 2 3     Integrin VLA-4 Beta Subunit2
MSK121 2 3     Very Late Activation Protein, Beta Polypeptide2
Glycoprotein IIa2 3     CD29 Antigen3
GPIIA2 3     Fibronectin Receptor Subunit Beta3
CD292     VLA-4 Subunit Beta3
VLA-BETA2     

External Ids:    HGNC: 61531   Entrez Gene: 36882   Ensembl: ENSG000001500937   OMIM: 1356305   UniProtKB: P055563   

Export aliases for ITGB1 gene to outside databases

Previous GC identifers: GC10M032936 GC10M033339 GC10M033193 GC10M033164 GC10M033229


Summaries
for ITGB1 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for ITGB1 Gene:
Integrins are heterodimeric proteins made up of alpha and beta subunits. At least 18 alpha and 8 beta subunits have
been described in mammals. Integrin family members are membrane receptors involved in cell adhesion and recognition in
a variety of processes including embryogenesis, hemostasis, tissue repair, immune response and metastatic diffusion of
tumor cells. This gene encodes a beta subunit. Multiple alternatively spliced transcript variants which encode
different protein isoforms have been found for this gene. (provided by RefSeq, Jul 2008)

GeneCards Summary for ITGB1 Gene: 
ITGB1 (integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)) is a protein-coding gene. Diseases associated with ITGB1 include frozen shoulder, and cerebral hypoxia, and among its related super-pathways are Integrin-mediated cell adhesion and ECM-receptor interaction. GO annotations related to this gene include protein kinase binding and protein heterodimerization activity. An important paralog of this gene is ITGB4.

UniProtKB/Swiss-Prot: ITB1_HUMAN, P05556
Function: Integrins alpha-1/beta-1, alpha-2/beta-1, alpha-10/beta-1 and alpha-11/beta-1 are receptors for collagen.
Integrins alpha-1/beta-1 and alpha-2/beta-2 recognize the proline-hydroxylated sequence G-F-P-G-E-R in collagen.
Integrins alpha-2/beta-1, alpha-3/beta-1, alpha-4/beta-1, alpha-5/beta-1, alpha-8/beta-1, alpha-10/beta-1,
alpha-11/beta-1 and alpha-V/beta-1 are receptors for fibronectin. Alpha-4/beta-1 recognizes one or more domains within
the alternatively spliced CS-1 and CS-5 regions of fibronectin. Integrin alpha-5/beta-1 is a receptor for fibrinogen.
Integrin alpha-1/beta-1, alpha-2/beta-1, alpha-6/beta-1 and alpha-7/beta-1 are receptors for lamimin. Integrin
alpha-4/beta-1 is a receptor for VCAM1. It recognizes the sequence Q-I-D-S in VCAM1. Integrin alpha-9/beta-1 is a
receptor for VCAM1, cytotactin and osteopontin. It recognizes the sequence A-E-I-D-G-I-E-L in cytotactin. Integrin
alpha-3/beta-1 is a receptor for epiligrin, thrombospondin and CSPG4. Alpha-3/beta-1 may mediate with LGALS3 the
stimulation by CSPG4 of endothelial cells migration. Integrin alpha-V/beta-1 is a receptor for vitronectin. Beta-1
integrins recognize the sequence R-G-D in a wide array of ligands. Isoform beta-1B interferes with isoform beta-1A
resulting in a dominant negative effect on cell adhesion and migration (in vitro). In case of HIV-1 infection, the
interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma lesions. When
associated with alpha-7/beta-1 integrin, regulates cell adhesion and laminin matrix deposition. Involved in promoting
endothelial cell motility and angiogenesis. Involved in osteoblast compaction through the fibronectin fibrillogenesis
cell-mediated matrix assembly process and the formation of mineralized bone nodules. May be involved in up-regulation
of the activity of kinases such as PKC via binding to KRT1. Together with KRT1 and GNB2L1/RACK1, serves as a platform
for SRC activation or inactivation. Plays a mechanistic adhesive role during telophase, required for the successful
completion of cytokinesis

summary for ITGB1 Gene:
Integrins are ubiquitously expressed adhesion molecules. They are cell-surface receptors that exist as
heterodimers of alpha and beta subunits. At physiological conditions, integrins are highly glycosylated and
contain a Ca2+ or Mg2+ ion, which is essential for ligand binding. Integrin receptors are critical for cell
attachment to the extracellular matrix (ECM) and this is mediated through integrin-fibronectin,
-vitronectin, -collagen and -laminin interactions. Intracellularly, integrins form adhesion complexes with
proteins including talin, vinculin, paxillin and alpha-actinin. They also regulate kinases, such as focal
adhesion kinase and Src family kinases, to mediate attachment to the actin cytoskeleton. Integrins also have
a significant role in cell signaling and can activate protein kinases involved in the regulation of cell
growth, division, survival, differentiation, migration and apoptosis. Glycoprotein II/IIIb (alphaIIbeta3) is
an integrin receptor found on the surface of platelets. It is involved in the cross-linking of platelets
with fibrin, and so has a vital role in blood clot formation.

Gene Wiki entry for ITGB1 (CD29) Gene


Genomic Views
for ITGB1 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NT_008705.16  NC_018921.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ITGB1 gene promoter:
         AP-1   ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: ITGB1 promoter sequence
   Search SABiosciences Chromatin IP Primers for ITGB1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ITGB1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10p11.2   Ensembl cytogenetic band:  10p11.22   HGNC cytogenetic band: 10p11.2

ITGB1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ITGB1 gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M033189:  view genomic region     (about GC identifiers)

Start:
 33,189,246 bp from pter      End:
 33,294,720 bp from pter
Size:
 105,475 bases      Orientation:
 minus strand

Proteins
for ITGB1 gene

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section
UniProtKB/Swiss-Prot: ITB1_HUMAN, P05556 (See protein sequence)
Recommended Name: Integrin beta-1 precursor  
Size: 798 amino acids; 88415 Da
Subunit: Heterodimer of an alpha and a beta subunit. Beta-1 associates with either alpha-1, alpha-2, alpha-3, alpha-4,
alpha-5, alpha-6, alpha-7, alpha-8, alpha-9, alpha-10, alpha-11 or alpha-V. Binds LGALS3BP and NMRK2, when associated
with alpha-7, but not with alpha-5. Interacts with FGR and HCK (By similarity). Interacts (via the cytoplasmic region)
with RAB25 (via the hypervariable C-terminal region). Interacts with RAB21. Interacts with KRT1 in the presence of
GNB2L1 and SRC. Interacts with HIV-1 Tat. Binds to human echoviruses 1 and 8 capsid proteins and acts as a receptor
for these viruses. Interacts with FLNA, FLNB and RANBP9. Isoform Beta-1D interacts with ACE2. Isoform Beta-1A
interacts with the C-terminal region of FLNC. Interacts with MYO10. Interacts with DAB2. Interacts with FERMT2; the
interaction is inhibited in presence of ITGB1BP1. Interacts with ITGB1BP1 (via C-terminus region); the interaction is
a prerequisite for focal adhesion disassembly. Interacts with TLN1; the interaction is prevented by competitive
binding of ITGB1BP1. Interacts with human cytomegalovirus/HHV-5 envelop glycoprotein B/gB
Subcellular location: Cell membrane; Single-pass type I membrane protein. Melanosome. Cleavage furrow. Cell projection,
lamellipodium. Cell projection, ruffle. Note=Isoform beta-1B does not localize to focal adhesions. Highly enriched in
stage I melanosomes. Located on plasma membrane of neuroblastoma NMB7 cells. In a lung cancer cell line, in
prometaphase and metaphase, localizes diffusely at the membrane and in a few intracellular vesicles. In early
telophase, detected mainly on the matrix-facing side of the cells. By mid-telophase, concentrated to the ingressing
cleavage furrow, mainly to the basal side of the furrow. In late telophase, concentrated to the extending protrusions
formed at the opposite ends of the spreading daughter cells, in vesicles at the base of the lamellipodia formed by the
separating daughter cells. Colocalizes with ITGB1BP1 and metastatic suppressor protein NME2 at the edge or peripheral
ruffles and lamellipodia during the early stages of cell spreading on fibronectin or collagen. Translocates from
peripheral focal adhesions sites to fibrillar adhesions in a ITGB1BP1-dependent manner
Sequence caution: Sequence=CAD97649.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
6/7 PDB 3D structures from and Proteopedia for ITGB1 (see all 7):
1K11 (3D)        1LHA (3D)        3G9W (3D)        3T9K (3D)        3VI3 (3D)        3VI4 (3D)    
Secondary accessions: A8K6N2 D3DRX9 D3DRY3 D3DRY4 D3DRY5 P78466 P78467 Q13089 Q13090 Q13091 Q13212
Q14622 Q14647 Q29RW2 Q7Z3V1 Q8WUM6
Alternative splicing: 5 isoforms:  P05556-1   P05556-2   P05556-3   P05556-4   P05556-5   

Explore the universe of human proteins at neXtProt for ITGB1: NX_P05556

Explore proteomics data for ITGB1 at MOPED 

Post-translational modifications:

  • UniProtKB: The cysteine residues are involved in intrachain disulfide bonds (By similarity)
  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_P05556

    • ITGB1 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    ITGB1 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_002202.2  NP_391988.1  NP_596867.1  

    ENSEMBL proteins: 
     ENSP00000303351   ENSP00000417508   ENSP00000417799   ENSP00000417537   ENSP00000420282  
     ENSP00000418725   ENSP00000431326   ENSP00000398029   ENSP00000417243   ENSP00000436214  
     ENSP00000404546   ENSP00000420792   ENSP00000420416   ENSP00000400544   ENSP00000379350  
     ENSP00000364094   ENSP00000388694  
    Reactome Protein details: P05556
    Human Recombinant Protein Products for ITGB1: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Proteins for ITGB1
    OriGene Protein Over-expression Lysate for ITGB1
    OriGene MassSpec for ITGB1 
    OriGene Custom Protein Services for ITGB1
    GenScript Custom Purified and Recombinant Proteins Services for ITGB1
    Novus Biologicals ITGB1 Proteins
    Novus Biologicals ITGB1 Lysates
    Browse Sino Biological Recombinant Proteins
    Sino Biological Cell Lysate for ITGB1 
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Cloud-Clone Corp. 

    Gene Ontology (GO): 5/28 cellular component terms (GO ID links to tree view) (see all 28):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001669acrosomal vesicle IEA--
    GO:0001726ruffle TAS11919189
    GO:0005604basement membrane IEA--
    GO:0005737cytoplasm IDA16803572
    GO:0005886plasma membrane TAS--

    ITGB1 for ontologies           About GeneDecksing



    ITGB1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of ITGB1
    R&D Systems Antibodies for ITGB1 (Integrin beta 1/CD29)
    Cell Signaling Technology (CST) Antibodies for ITGB1 
    OriGene Antibodies for ITGB1
    OriGene Custom Antibody Services for ITGB1
    GenScript Custom Superior Antibodies Services for ITGB1
    Novus Biologicals ITGB1 Antibodies
    Abcam antibodies for ITGB1
    Browse Antibodies at Cloud-Clone Corp. 
    ThermoFisher Antibody for ITGB1
    LSBio Antibodies in human, mouse, rat for ITGB1 

    Assay Products for ITGB1: 
    EMD Millipore Kits and Assays for the Analysis of ITGB1
    OriGene Custom Assay Services for ITGB1
    R&D Systems Proteome Profiler Antibody Arrays for ITGB1 (Integrin beta 1/CD29)
    GenScript Custom Assay Services for ITGB1
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs at Cloud-Clone Corp. 
    Browse CLIAs at Cloud-Clone Corp.

    Protein Domains /
    Families
    for ITGB1 gene

    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    		 HGNC Gene Families: 
    CD: CD molecules
    ITG: Integrins

    5/9 InterPro protein domains (see all 9):
     IPR027071 Integrin_beta-1
     IPR002369 Integrin_bsu_N
     IPR012896 Integrin_bsu_tail
     IPR015812 Integrin_bsu
     IPR014836 Integrin_bsu_cyt_dom

    Graphical View of Domain Structure for InterPro Entry P05556

    ProtoNet protein and cluster: P05556

    2 Blocks protein domains:
    IPB001169 Integrin beta
    IPB002369 Integrin beta subunit signature


    UniProtKB/Swiss-Prot: ITB1_HUMAN, P05556
    Similarity: Belongs to the integrin beta chain family
    Similarity: Contains 1 VWFA domain


    ITGB1 for domains           About GeneDecksing


    Function
    for ITGB1 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section
    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ITB1_HUMAN, P05556
    Function: Integrins alpha-1/beta-1, alpha-2/beta-1, alpha-10/beta-1 and alpha-11/beta-1 are receptors for collagen.
    Integrins alpha-1/beta-1 and alpha-2/beta-2 recognize the proline-hydroxylated sequence G-F-P-G-E-R in collagen.
    Integrins alpha-2/beta-1, alpha-3/beta-1, alpha-4/beta-1, alpha-5/beta-1, alpha-8/beta-1, alpha-10/beta-1,
    alpha-11/beta-1 and alpha-V/beta-1 are receptors for fibronectin. Alpha-4/beta-1 recognizes one or more domains within
    the alternatively spliced CS-1 and CS-5 regions of fibronectin. Integrin alpha-5/beta-1 is a receptor for fibrinogen.
    Integrin alpha-1/beta-1, alpha-2/beta-1, alpha-6/beta-1 and alpha-7/beta-1 are receptors for lamimin. Integrin
    alpha-4/beta-1 is a receptor for VCAM1. It recognizes the sequence Q-I-D-S in VCAM1. Integrin alpha-9/beta-1 is a
    receptor for VCAM1, cytotactin and osteopontin. It recognizes the sequence A-E-I-D-G-I-E-L in cytotactin. Integrin
    alpha-3/beta-1 is a receptor for epiligrin, thrombospondin and CSPG4. Alpha-3/beta-1 may mediate with LGALS3 the
    stimulation by CSPG4 of endothelial cells migration. Integrin alpha-V/beta-1 is a receptor for vitronectin. Beta-1
    integrins recognize the sequence R-G-D in a wide array of ligands. Isoform beta-1B interferes with isoform beta-1A
    resulting in a dominant negative effect on cell adhesion and migration (in vitro). In case of HIV-1 infection, the
    interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma lesions. When
    associated with alpha-7/beta-1 integrin, regulates cell adhesion and laminin matrix deposition. Involved in promoting
    endothelial cell motility and angiogenesis. Involved in osteoblast compaction through the fibronectin fibrillogenesis
    cell-mediated matrix assembly process and the formation of mineralized bone nodules. May be involved in up-regulation
    of the activity of kinases such as PKC via binding to KRT1. Together with KRT1 and GNB2L1/RACK1, serves as a platform
    for SRC activation or inactivation. Plays a mechanistic adhesive role during telophase, required for the successful
    completion of cytokinesis

         Genatlas biochemistry entry for ITGB1:
    integrin,beta 1 chain,common beta subunit of very late antigens VLA1-6 and fibronectin/laminin/tenascin/vitronectin
    receptor,including MDF2,MSK2,identified by monoclonal antibodies A-1A5,AJ2,cell surface adhesion receptor mediating
    cell-adhesion to extra cellular matrix or to other cells,through hetero dimerization and connecting to the
    cytoskeleton and various signaling molecules within cells,inducing an alternatively spliced isoform ITGB1C,inhibitor
    of cell proliferation,expressed in epidermal cells of the basal layer (stem,transit-amplifying,commited basal
    cells),inhibiting expression of suprabasal markers of terminal differentiation,coexpressed in human prostate
    epithelial cells with the cell cycle inhibitor p27/Kip1 (CDKN1B),involved in migration and survival in primary
    oligodendrocytes

         Gene Ontology (GO): 5/19 molecular function terms (GO ID links to tree view) (see all 19):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001618virus receptor activity IEA--
    GO:0001948glycoprotein binding IEA--
    GO:0001968fibronectin binding IEA--
    GO:0002020protease binding IEA--
    GO:0003779actin binding IDA16803572
         
    ITGB1 for ontologies           About GeneDecksing


    Phenotypes:
         5 GenomeRNAi human phenotypes for ITGB1:
     Increased G2M DNA content, inc  Increased Salmonella enterica   Increased number of mitotic ce  Synthetic lethal with imatinib 
     Weaker migration 

         15/27 MGI mutant phenotypes (inferred from 24 alleles) (MGI details for Itgb1) (see all 27):
     behavior/neurological  cardiovascular system  cellular  craniofacial  digestive/alimentary 
     embryogenesis  endocrine/exocrine gland  growth/size  hearing/vestibular/ear  hematopoietic system 
     homeostasis/metabolism  immune system  integument  limbs/digits/tail  liver/biliary system 

    ITGB1 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for ITGB1: Itgb1tm1Son Itgb1tm1Lscd Itgb1tm2Ref Itgb1tm1.1Efu
       inGenious Targeting Laboratory - Custom generated mouse model solutions for ITGB1 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for ITGB1

    miRNA
    Products:            		miRTarBase miRNAs that target ITGB1:
    hsa-mir-124 (MIRT002731), hsa-mir-183 (MIRT004015)

    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ITGB1
    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate ITGB1 (see all 13):
    hsa-miR-29c hsa-miR-29a hsa-miR-183 hsa-miR-513c hsa-miR-221* hsa-miR-548t hsa-miR-124 hsa-miR-9*
    SwitchGear 3'UTR luciferase reporter plasmids (see all 2): ITGB1 3' UTR sequence
    Inhib. RNA
    Products:            		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for ITGB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ITGB1
    Sirion Biotech Custom design and validation of potent shRNA sequences against ITGB1

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for ITGB1
    Sirion Biotech Customized adenovirus for overexpression of ITGB1
                         Customized adenovirus for potent knockdown of ITGB1

    Clone
    Products:             		Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene clones in human, mouse for ITGB1 (see all 25)
    OriGene ORF clones in mouse, rat for ITGB1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector (see all 3): ITGB1 (NM_033668)
    Sino Biological Human cDNA Clone for ITGB1
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ITGB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ITGB1

    Cell Line
    Products:             		GenScript Custom overexpressing Cell Line Services for ITGB1
    Search LifeMap BioReagents cell lines for ITGB1
    Sirion Biotech Customized stable knockdown cell line services for ITGB1
                         Customized inducible knockdown cell line services for ITGB1
                         Customized stable overexpressing cell line services for ITGB1
                         Customized inducible overexpressing cell line services for ITGB1

    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ITGB1


    Pathways & Interactions
    for ITGB1 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section

    SuperPaths for ITGB1 About   (see all 84)                                                                                              See pathways by source

    SuperPathContained pathways About
    1Focal Adhesion
    		Focal Adhesion0.64
    		Integrin-mediated cell adhesion0.38
    		Focal adhesion0.64
    		HGF Pathway0.34
    2Non-integrin membrane-ECM interactions
    		Non-integrin membrane-ECM interactions0.44
    		ECM proteoglycans0.38
    		Syndecan interactions0.44
    		Integrin cell surface interactions0.32
    		ECM-receptor interaction0.42
    3Hypertrophic cardiomyopathy (HCM)
    		Hypertrophic cardiomyopathy (HCM)0.75
    		Arrhythmogenic right ventricular cardiomyopathy (ARVC)0.54
    		Dilated cardiomyopathy0.75
    		Arrhythmogenic right ventricular cardiomyopathy0.53
    4Development Slit-Robo signaling
    		Pathogenic Escherichia coli infection0.43
    		Pathogenic Escherichia coli infection0.41
    5Integrin Pathway
    		Integrin Pathway0.67
    		UPA-UPAR Pathway0.56
    		FAK1 Signaling0.67
    		Transendothelial Migration of Leukocytes0.38
    		GnRH Signaling0.56

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways

    5/14 EMD Millipore Pathways for ITGB1 (see all 14)
        Cytoskeleton remodeling Integrin outside-in signaling
    Cytoskeleton remodeling Role of PKA in cytoskeleton reorganisation
    Signal transduction PTEN pathway
    Cytoskeleton remodeling Fibronectin-binding integrins in cell motility
    Cell adhesion PLAU signaling

    1 R&D Systems Pathway for ITGB1
        Articular Cartilage Extracellular Matrix

    5/38 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for ITGB1 (see all 38)
        RhoA Pathway
    Paxillin Interactions
    Molecular Mechanisms of Cancer
    CDK5 Pathway
    Tec Kinases Signaling

    2 Cell Signaling Technology (CST) Pathways for ITGB1
        Angiogenesis
    Adhesion

    2 Tocris Bioscience Pathways for ITGB1
        NF-kappaB Pathway
    MAPK Pathway

    5/14 GeneGo (Thomson Reuters) Pathways for ITGB1 (see all 14)
        Cell adhesion Cell-matrix glycoconjugates
    Cell adhesion Integrin inside-out signaling
    Signal transduction PTEN pathway
    Cytoskeleton remodeling Role of PKA in cytoskeleton reorganisation
    Cytoskeleton remodeling Fibronectin-binding integrins in cell motility

    5/22 BioSystems Pathways for ITGB1 (see all 22)
        Focal Adhesion
    Integrin-mediated cell adhesion
    Neural Crest Differentiation
    Pathogenic Escherichia coli infection
    Arrhythmogenic right ventricular cardiomyopathy


    5/27        Reactome Pathways for ITGB1 (see all 27)
        L1CAM interactions
    Localization of the PINCH-ILK-PARVIN complex to focal adhesions
    Developmental Biology
    Elastic fibre formation
    Other semaphorin interactions


    5/20         Kegg Pathways  (Kegg details for ITGB1) (see all 20):
        Phagosome
    PI3K-Akt signaling pathway
    Axon guidance
    Focal adhesion
    ECM-receptor interaction


    ITGB1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ITGB1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/297 Interacting proteins for ITGB1 (P055561, 2, 3 ENSP000003640944) via UniProtKB, MINT, STRING, and/or I2D (see all 297)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CD63P089622, 3, ENSP000002578574MINT-2981958 MINT-2981939 MINT-8407185 I2D: score=2 STRING: ENSP00000257857
    FHL2Q141922, 3, ENSP000003229094MINT-16547 MINT-16546 I2D: score=4 STRING: ENSP00000322909
    ITGA2P173011, 3, ENSP000002965854EBI-703066,EBI-702960 I2D: score=3 STRING: ENSP00000296585
    CSF2RBP329271, 3, ENSP000003840534EBI-703066,EBI-1809771 I2D: score=2 STRING: ENSP00000384053
    FN1P027512, 3, ENSP000003468394MINT-8208428 I2D: score=2 STRING: ENSP00000346839
    About this table

    Gene Ontology (GO): 5/55 biological process terms (GO ID links to tree view) (see all 55):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000082G1/S transition of mitotic cell cycle IEA--
    GO:0001701in utero embryonic development IEA--
    GO:0001708cell fate specification IEA--
    GO:0001894tissue homeostasis IEA--
    GO:0002042cell migration involved in sprouting angiogenesis IEA--

    ITGB1 for ontologies           About GeneDecksing



    Drugs & Compounds
    for ITGB1 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, IUPHAR, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    ITGB1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for ITGB1 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    TC-I 15Potent alpha2beta1 inhibitor; displays antithrombotic activity in vivo[916734-43-5]
    BIO 1211Selective alpha4beta1 (VLA-4) inhibitor[187735-94-0]
    Leukadherin 1Allosteric activator of CD11b/CD18[344897-95-6]
    A 286982Potent inhibitor of the LFA-1/ICAM-1 interaction[280749-17-9]
    ObtustatinPotent and selective alpha1beta1 inhibitor--

    1 DrugBank Compound for ITGB1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Antithymocyte globulinrabbit ATG (see all 3)--target--12586600

    10/64 Novoseek inferred chemical compound relationships for ITGB1 gene (see all 64)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    grgdsp 65.5 1 7648723 (1)
    kalinin 63.9 1 8876604 (1)
    herbimycin a 57.6 4 15546505 (1), 8089188 (1), 9230816 (1), 12209735 (1)
    tyrosine 48.7 52 11250890 (3), 7520449 (3), 7592610 (2), 10395641 (2) (see all 37)
    matrigel 48.7 2 8740459 (2)
    cytochalasin b 39.3 2 14706635 (1), 8989906 (1)
    adapalene 38.9 1 19657615 (1), 19903100 (1)
    phosphotyrosine 35.3 5 7577832 (1), 7527397 (1), 8546227 (1), 8748369 (1) (see all 5)
    slex 35.1 2 9733622 (1), 18334960 (1)
    genistein 30.5 2 11315093 (1), 8089188 (1)

    Search CenterWatch for drugs/clinical trials and news about ITGB1 / ITB1

    Transcripts
    for ITGB1 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for ITGB1 gene (6 alternative transcripts): 
    NM_002211.3  NM_033668.2  NM_133376.2  NM_033666.2  NM_033667.2  NM_033669.2  

    Unigene Cluster for ITGB1:

    Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
    Hs.643813  [show with all ESTs]
    Unigene Representative Sequence: NM_002211
    18/20 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 20):
    ENST00000302278 ENST00000488427 ENST00000494395 ENST00000484088 ENST00000480226
    ENST00000474568 ENST00000488494 ENST00000534049 ENST00000437302 ENST00000475184
    ENST00000528877 ENST00000417122 ENST00000464001 ENST00000493758 ENST00000472147
    ENST00000414670 ENST00000439974 ENST00000396033(uc001iws.4)
    Congresses - knowledge worth sharing:  
    European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) 10 - 13 May 2014

    miRNA
    Products:         
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ITGB1
    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate ITGB1 (see all 13):
    hsa-miR-29c hsa-miR-29a hsa-miR-183 hsa-miR-513c hsa-miR-221* hsa-miR-548t hsa-miR-124 hsa-miR-9*
    SwitchGear 3'UTR luciferase reporter plasmids (see all 2): ITGB1 3' UTR sequence
    Inhib. RNA
    Products:             		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for ITGB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ITGB1
    Sirion Biotech Custom design and validation of potent shRNA sequences against ITGB1
    Clone
    Products:             		 OriGene clones in human, mouse for ITGB1 (see all 25)
    OriGene ORF clones in mouse, rat for ITGB1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector (see all 3): ITGB1 (NM_033668)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ITGB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ITGB1
    Primer
    Products:            		OriGene qPCR primer pairs and template standards for ITGB1
    OriGene qSTAR qPCR primer pairs in human, mouse for ITGB1
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ITGB1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ITGB1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ITGB1

    Additional mRNA sequence: 

    AK291697.1 BC020057.1 BC113901.1 BX537407.1 M34189.1 U28252.1 

    24/46 DOTS entries (see all 46):

    DT.95250205  DT.95144425  DT.92411211  DT.100889329  DT.92468841  DT.65286518  DT.102839004  DT.100659208 
    DT.100889330  DT.92468837  DT.100889334  DT.100889338  DT.100889349  DT.100889328  DT.121292288  DT.100045345 
    DT.100889343  DT.121292182  DT.95172289  DT.95129453  DT.121292178  DT.97820426  DT.100889347  DT.121292202 

    24/1076 AceView cDNA sequences (see all 1076):

    BX952322 BQ773452 AA984009 AA393858 AI597586 AU129980 BG568595 AL047242 
    CD722765 AA894385 CF552433 AI978938 BG055271 CD514801 CD516552 AV655409 
    AW471282 AL710873 AA136528 CR618169 CN483087 AL598172 AI753845 AA563900 

    GeneLoc Exon Structure


    Expression
    for ITGB1 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ITGB1 expression in normal human tissues (normalized intensities)      ITGB1 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: TGAAGTTATA
    ITGB1 Expression
    About this image


    ITGB1 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/38 selected tissues (see all 38) fully expand
     
     Skeletal Muscle (Muscoskeletal System)    fully expand to see all 37 entries
             Multinuclear Myocytes Sacral Back Muscles
             Expanded PAX7 cells (Generation of skeletal muscle myogenic progenitor cells from...
             skeletal muscle ; myocytes
             vastus lateralis
     
     Somite (Muscoskeletal System)    fully expand to see all 16 entries
             Mononuclear Myocytes Sacral Primary Hypaxial Myotome
             Expanded PAX7 cells (Generation of skeletal muscle myogenic progenitor cells from...
     
     Limb (Muscoskeletal System)    fully expand to see all 14 entries
             Central Intermediate Lamina Cells Stylopod Synovial Joint
     
     Bone (Muscoskeletal System)    fully expand to see all 11 entries
             Bone Marrow
             Bone marrow-derived mesenchymal stem cells
     
     Cartilage (Muscoskeletal System)    fully expand to see all 10 entries
             Central Intermediate Lamina Cells Stylopod Synovial Joint

    See ITGB1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ITGB1

    SOURCE GeneReport for Unigene cluster: Hs.643813

    UniProtKB/Swiss-Prot: ITB1_HUMAN, P05556
    Tissue specificity: Isoform beta-1A is widely expressed, other isoforms are generally coexpressed with a more
    restricted distribution. Isoform beta-1B is expressed in skin, liver, skeletal muscle, cardiac muscle, placenta,
    umbilical vein endothelial cells, neuroblastoma cells, lymphoma cells, hepatoma cells and astrocytoma cells. Isoform
    beta-1C and isoform beta-1C-2 are expressed in muscle, kidney, liver, placenta, cervical epithelium, umbilical vein
    endothelial cells, fibroblast cells, embryonal kidney cells, platelets and several blood cell lines. Isoform beta-C-2,
    rather than isoform beta-1C, is selectively expressed in peripheral T-cells. Isoform beta-1C is expressed in
    non-proliferating and differentiated prostate gland epithelial cells and in platelets, on the surface of
    erythroleukemia cells and in various hematopoietic cell lines. Isoform beta-1D is expressed specifically in striated
    muscle (skeletal and cardiac muscle)

        SABiosciences Expression via Pathway-Focused PCR Arrays including ITGB1 (see all 15): 
              Osteogenesis in human mouse rat
              Fibrosis in human mouse rat
              Extracellular Matrix & Adhesion Molecules in human mouse rat
              Wound Healing in human mouse rat
              Cell Junction PathwayFinder in human mouse rat

    Primer
    Products:    		OriGene qPCR primer pairs and template standards for ITGB1
    OriGene qSTAR qPCR primer pairs in human, mouse for ITGB1
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ITGB1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ITGB1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ITGB1
    In Situ
    Assay Products:     
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ITGB1

    Orthologs
    for ITGB1 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of animals.

    Orthologs for ITGB1 gene from 7/17 species (see all 17)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Itgb11 , 5 integrin beta 1 (fibronectin receptor beta)1, 5 86.84(n)1
    91.23(a)1    		   8 (76.09 cM)5
    164121  NM_010578.21  NP_034708.11 
     1286856545 
    chicken
    (Gallus gallus)    		 Aves ITGB11 integrin, beta 1 (fibronectin receptor, beta polypeptide, more 78.04(n)
    83.88(a)    		   374058  NM_001039254.2  NP_001034343.2 
    lizard
    (Anolis carolinensis)    		 Reptilia ITGB16
    		 integrin, beta 1 (fibronectin receptor, beta polyp...
    		 79(a)
    		 1 ↔ 1
    		 6(12274686-12325701)
    African clawed frog
    (Xenopus laevis)    		 Amphibia Xl.76232 X.laevis integrin beta-1* subunit mRNA, complete cds 78.8(n)    M20180.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii itgb1a1 integrin, beta 1a 68.55(n)
    77.04(a)    		   556734  NM_001034971.1  NP_001030143.1 
    fruit fly
    (Drosophila melanogaster)    		 Insecta mys1 , 3 central nervous system development
    calcium-dependent more3
    myospheroid1    		 42(a)
    (best of 2)3
    51.05(n)1
    47.38(a)1    		   448851  NM_080054.21  NP_524793.21 
    worm
    (Caenorhabditis elegans)    		 Secernentea pat-31 , 3 beta integrin3
    Protein PAT-31    		 41(a)3
    52.25(n)1
    43.24(a)1    		   III(3981133-3985933)3
    1755041  NM_065386.41  NP_497787.11 


    ENSEMBL Gene Tree for ITGB1 (if available)
    TreeFam Gene Tree for ITGB1 (if available)

    Paralogs
    for ITGB1 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ITGB1 gene
    ITGB42  ENSG000002597532  ITGB72  ITGB22  ITGBL12  ITGB32  ITGB82  ITGB62  
    ITGB52  
    6 SIMAP similar genes for ITGB1 using alignment to 14 protein entries:     ITB1_HUMAN (see all proteins):
    ITGB5    ITGB8    ITGB3    ITGB7    ITGB2    ITGB6

    ITGB1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for ITGB1
    PGOHUM00000234172


    Genomic Variants
    for ITGB1 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1359 SNPs in ITGB1 are shown (see all 1359)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 10 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs777445831,2
    		C--32916639(+) GGATG-/CTTT  
                CTGTT     		3 -- int10--------
    rs30351751,2
    		C--32916641(+) ATGCTTTCT/-  
                GTTTT     		3 -- int15Minor allele frequency- -:0.21EU NA MN 382
    rs1471600131,2
    		C--32926365(+) GCAAA-/GACTTG 3 -- int10--------
    rs348875341,2
    		C--32939397(+) AATGTG/-GGGGA 3 -- int11Minor allele frequency- -:0.50NA 2
    rs562805521,2
    		C--32946020(+) AAAAA-/AAAAAAA
    /AAAAAAAA    GAGTT     		2 -- int11NA 2
    rs357573671,2
    		C--32955194(+) GGGGG-/GATTAT 2 -- int10--------
    rs1834209901,2
    		--32955205(+) GGGGGG/TGGGAT 2 -- int10--------
    rs1486944781,2
    		C--32955878(+) TAGCC-/GTGTGT
    /GTGTGTGT    GTGTG     		4 -- int1 cds10--------
    rs1414346471,2
    		--32955923(+) TGTACA/GTACAT 2 -- int10--------
    rs11870761,2
    		C,F,A--32966421(+) ACTTCT/CTCCTG 2 -- us2k1 int16Minor allele frequency- C:0.22MN NA 312

    HapMap Linkage Disequilibrium report for ITGB1 (33189246 - 33294720 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 3 variations for ITGB1:    About this table     
    Variant IDTypeSubtypePubMed ID
    esv999118CNV Loss20482838
    esv23179CNV Loss19812545
    nsv831827CNV Loss17160897

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ITGB1
    DNA2.0 Custom Variant and Variant Library Synthesis for ITGB1

    Disorders / Diseases
    for ITGB1 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    ITGB1 for disorders           About GeneDecksing

    OMIM gene information: 135630    OMIM disorders: --

    20/144 diseases for ITGB1 (see all 144):    About MalaCards
    frozen shoulder    cerebral hypoxia    sipple syndrome    plasma cell leukemia
    blood clots    bullous keratopathy    hemorrhagic fever with renal syndrome    keratopathy
    oral leukoplakia    glanders    von willebrand's disease    fraser syndrome
    leukoplakia    focal segmental glomerulosclerosis    synovitis    adenomyosis
    teratocarcinoma    bullous pemphigoid    benign tumors    prostate adenocarcinoma

    1 disease from the University of Copenhagen DISEASES database for ITGB1:
    Cancer

    Congresses - knowledge worth sharing:  
    Alzheimer's & Parkinson's Diseases Congress (ADPD) 18 - 22 March 2015

    10/81 Novoseek inferred disease relationships for ITGB1 gene (see all 81)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    melanoma 38.7 30 8630057 (3), 8006453 (3), 8694563 (3), 1293173 (2) (see all 16)
    tumors 38.3 71 7508107 (5), 11319874 (4), 7529636 (4), 7526040 (3) (see all 47)
    metastasis 34 15 14666731 (2), 1282908 (1), 9337541 (1), 1293172 (1) (see all 12)
    myeloma 27.1 11 7861616 (1), 18850009 (1), 9513075 (1), 7686332 (1) (see all 6)
    fibrosarcoma 25.6 1 11921440 (1)
    colon carcinoma 23.7 1 7509799 (1)
    necrosis 23.2 7 1723314 (1), 9348298 (1), 10417618 (1), 10235499 (1) (see all 6)
    osteosarcoma 22.5 4 8326445 (2), 8010959 (1), 7541624 (1)
    nephrotic syndrome minimal change 21.9 2 9355070 (1)
    plasma cell leukemia 20.6 1 7686332 (1)

    Genetic Association Database (GAD): ITGB1
    Human Genome Epidemiology (HuGE) Navigator: ITGB1 (18 documents)

    Export disorders for ITGB1 gene to outside databases

    Publications
    for ITGB1 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ITGB1 gene, integrated from 9 sources (see all 1475):
    (articles sorted by number of sources associating them with ITGB1)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. Crystal structure of a5b1 integrin ectodomain: atomic details of the fibronectin receptor. (PubMed id 22451694)1, 2 Nagae M....Takagi J. (2012)
    2. Kindlin-2 regulates podocyte adhesion and fibronectin matrix deposition through interactions with phosphoinositides and integrins. (PubMed id 21325030)1, 2 Qu H....Wu C. (2011)
    3. Evaluation of candidate stromal epithelial cross-talk genes identifies association between risk of serous ovarian cancer and TERT, a cancer susceptibility 'hot-spot'. (PubMed id 20628624)1, 4 Johnatty S.E.... . (2010)
    4. The glycoprotein B disintegrin-like domain binds beta 1 integrin to mediate cytomegalovirus entry. (PubMed id 20660204)1, 2 Feire A.L....Compton T. (2010)
    5. Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086)1, 4 Bailey S.D....Anand S. (2010)
    6. Common polymorphisms in ITGA2, PON1 and THBS2 are ass ociated with coronary atherosclerosis in a candidate gene association study of the Chinese Han population. (PubMed id 20485444)1, 4 Wang Y....Huang W. (2010)
    7. Genome-wide association scan of trait depression. (PubMed id 20800221)1, 4 Terracciano A....Costa P.T. (2010)
    8. KIF5B gene sequence variation and response of cardiac stroke volume to regular exercise. (PubMed id 18984674)1, 4 Argyropoulos G....Rankinen T. (2009)
    9. Association of human platelet alloantigen 1 through 5 polymorphisms with ischemic stroke. (PubMed id 18057877)1, 4 Saidi S....Almawi W.Y. (2008)
    10. Polymorphisms in mitochondrial genes and prostate can cer risk. (PubMed id 19064571)1, 4 Wang L....Thibodeau S.N. (2008)

    External Searches for ITGB1 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  
      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing ITGB1 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3688 HGNC: 6153 AceView: ITGB1 Ensembl:ENSG00000150093 euGenes: HUgn3688
    ECgene: ITGB1 Kegg: 3688 H-InvDB: ITGB1

    Other Databases showing ITGB1 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing ITGB1 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ITGB1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for ITGB1 Genetics and Cytogenetics in Oncology and Haematology
    Wikipedia http://en.wikipedia.org/wiki/CD29

    Intellectual Property
    for ITGB1 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for ITGB1 gene:
    Search GeneIP for patents involving ITGB1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    Products
    for ITGB1 gene

    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     EMD Millipore Mono- and Polyclonal Antibodies for the study of ITGB1
     EMD Millipore Kits and Assays for the Analysis of ITGB1
     Browse Small Molecules at EMD Millipore
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for ITGB1 (Integrin beta 1/CD29)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Protease Activity Assays and Reagents   Browse Recombinant/Natural Proteins  
     Browse Stem Cell Products   Browse Tocris Biochemicals & Compounds  
     Browse cDNA Clones   Proteome Profiler Antibody Arrays for ITGB1 (Integrin beta 1/CD29)  
     OriGene Antibodies for ITGB1   OriGene RNAi products in human, mouse, rat for ITGB1  
     OriGene qPCR primer pairs and template standards for ITGB1   OriGene Protein Over-expression Lysate for ITGB1  
     OriGene MassSpec something-or-other for ITGB1   OriGene clones in human, mouse for ITGB1  
     OriGene qSTAR qPCR primer pairs in human, mouse for ITGB1   OriGene Purified Protein for ITGB1  
     OriGene ORF clones in mouse, rat for ITGB1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for ITGB1   OriGene Custom Protein Services for ITGB1  

         		 
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ITGB1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ITGB1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ITGB1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ITGB1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ITGB1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ITGB1
     GenScript Custom Purified and Recombinant Proteins Services for ITGB1 GenScript cDNA clones with any tag delivered in your preferred vector for ITGB1
     GenScript Custom Assay Services for ITGB1 GenScript Custom Superior Antibodies Services for ITGB1
     GenScript Custom overexpressing Cell Line Services for ITGB1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for ITGB1 

     Regulatory tfbs in ITGB1 promoter
     Search Chromatin IP Primers for ITGB1
     RT2 qPCR Primer Assay in human, mouse, rat ITGB1
     GNC Network for ITGB1
     SABiosciences PCR Arrays including human, mouse, rat ITGB1
     Tocris compounds for ITGB1
     Browse Sino Biological Proteins and Antibodies
     Cell Lysates for ITGB1
     cDNA Clones for ITGB1
     4000+ Proteins
     Search Sino Biological for antibodies, proteins & pathways
     Protein Production Services
     Transfection Reagents
     Protein A/G/L resins
     Isotyping reagents
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     ITGB1 antibodies
     ITGB1 proteins
     ITGB1 lysates
     Antibodies for ITGB1
     See all of Abcam's Antibodies, Kits and Proteins for ITGB1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse Proteins at Cloud-Clone Corp.
     Browse Antibodies at Cloud-Clone Corp.
     Browse ELISAs at Cloud-Clone Corp.
     Browse CLIAs at Cloud-Clone Corp.
     Search LifeMap BioReagents cell lines for ITGB1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ITGB1
     SwitchGear 3'UTR luciferase reporter plasmids for ITGB1
     SwitchGear Promoter luciferase reporter plasmids for ITGB1
     ThermoFisher Antibody for ITGB1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ITGB1
     inGenious Targeting Laboratory - Custom generated mouse model solutions for ITGB1
     inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for ITGB1
    Customized:
     stable knockdown cell line services for ITGB1
     inducible knockdown cell line services for ITGB1
     design and validation of potent shRNA sequences against ITGB1
     adenovirus for potent knockdown of ITGB1
     stable overexpressing cell line services for ITGB1
     inducible overexpressing cell line services for ITGB1
     adenovirus for overexpression of ITGB1
     LSBio Antibodies in human, mouse, rat for ITGB1
           
    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013

    View Random Gene

    Category
    (GIFtS: 73)
    transforming growth factor, beta 1
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 

    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Copyright © 1996-2013 , Weizmann Institute of Science. All Rights Reserved.
    Hot genes      Disease genes      ITGB1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4