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ITGAV Gene

protein-coding   GIFtS: 68

GC02P187163
integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
(Previous name: antigen identified by monoclonal antibody L230 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbols: VNRA, MSK8)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
CD51 1, 2
DKFZp686A08142 2
MSK8 2, 3
VNRA 2, 3, 5
Descriptions
CD51 antigen 3
Vitronectin receptor subunit alpha 3
antigen identified by monoclonal antibody L230 1, 2
integrin alpha-V 2
integrin, alpha V (vitronectin receptor, alpha polypeptide,
antigen CD51) 2
External Ids
HGNC: 61501
Entrez Gene: 36852
UniProtKB: P067563
Ensembl: ENSG000001384487
Search outside databases for aliases for ITGAV gene

Previous GC identifers: GC02P185662 GC02P186138 GC02P187418 GC02P187657 GC02P187280

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ITGAV:
ITAGV encodes integrin alpha chain V. Integrins are heterodimeric integral membrane proteins
composed of an alpha chain and a beta chain. The I-domain containing integrin alpha V undergoes
post-translational cleavage to yield disulfide-linked heavy and light chains, that combine with
multiple integrin beta chains to form different integrins. Among the known associating beta chains
(beta chains 1,3,5,6, and 8; 'ITGB1', 'ITGB3', 'ITGB5',
'ITGB6', and 'ITGB8'), each can interact with extracellular matrix ligands;
the alpha V beta 3 integrin, perhaps the most studied of these, is referred to as the Vitronectin
receptor (VNR). In addition to adhesion, many integrins are known to facilitate signal
transduction. Alternative splicing results in multiple transcript variants. [provided by RefSeq]

UniProtKB/Swiss-Prot: ITAV_HUMAN, P06756
Function: The alpha-V integrins are receptors for vitronectin, cytotactin, fibronectin, fibrinogen,
laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin and
vWF. They recognize the sequence R-G-D in a wide array of ligands. In case of HIV-1 infection, the
interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma
lesions

Gene Wiki entry for ITGAV

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ITGAV gene  

Entrez Gene cytogenetic band: 2q31-q32   Ensembl cytogenetic band:  2q32.1   HGNC cytogenetic band: 2q31-q32

ITGAV Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P187163:     (about GC identifiers)

Start:
187,163,045 bp from pter
End:
187,253,873 bp from pter
Size:
90,829 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000002.10  NT_005403.16  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: ITAV_HUMAN, P06756 (See protein sequence)
Recommended Name: Integrin alpha-V precursor  
Size: 1048 amino acids; 116038 Da
Subunit: Heterodimer of an alpha and a beta subunit. The alpha subunit is composed of an heavy and
a light chain linked by a disulfide bond. Alpha-V associates with either beta-1, beta-3, beta-5,
beta-6 or beta-8 subunit. Interacts with HIV-1 Tat. Alpha-V/beta-6 binds to foot-and-mouth disease
virus (FMDV) VP1 protein and acts as a receptor for this virus (By similarity). Alpha-V/beta-6
binds to coxsackievirus A9 and coxsackievirus B1 capsid proteins and acts as a receptor for these
viruses
Subcellular location: Membrane; Single-pass type I membrane protein
PDB structures from and Proteopedia :
1JV2 (3D)    1L5G (3D)    1M1X (3D)    1U8C (3D)    
Secondary accessions: A0AV67 Q53SK4 Q59EB7 Q6LD15
Alternative splicing: 2 isoforms:  P06756-1   P06756-2   

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (3 alternative transcripts): 
    NP_001138471.1  NP_001138472.1  NP_002201.1  


    ENSEMBL proteins: 
    ENSP00000364042 ENSP00000261023 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Millipore Purified and/or Recombinant ITGAV Protein
    Sigma-Aldrich CompoZr ZFN for ITGAV  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Integrin alpha V beta 3, Integrin alpha V, Integrin alpha V+beta 5, CD51 + CD61)
    Human Recombinant Proteins from Abnova (ITGAV)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    5 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737 cytoplasm IDA18029348
    GO:0005886 plasma membrane IEA--
    GO:0005925 focal adhesion IDA18029348
    GO:0008305 integrin complex NAS11877390
    GO:0009897 external side of plasma membrane IEA--
    About this table

    Antibodies for ITGAV: 
    Invitrogen Antibodies for ITGAV
    Millipore Mono- and Polyclonal Antibodies for the study of ITGAV
    Sigma-Aldrich Antibodies for ITGAV
    R&D Systems Antibodies for ITGAV (Integrin alpha V/CD51)
    Cell Signaling Technology (CST) Antibodies for ITGAV  (integrin alpha5)
    Antibodies from Abcam (Integrin alpha V beta 3, Integrin alpha V, Integrin alpha V+beta 5, CD51 + CD61), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (ITGAV)
    Novus Biologicals Antibodies for ITGAV

    Assays for ITGAV: 
    Browse Invitrogen for biochemical assays
    Millipore Kits and Assays for the Analysis of ITGAV
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/6 InterPro domains/families (see all 6 ):
     IPR000413 Integrin_alpha
     IPR013519 Int_alpha_beta-p
     IPR018184 Integrin_alpha_C_CS
     IPR013517 FG-GAP
     IPR013649 Integrin_alpha-2


       GeneDecks  ITGAV for the domains selected above  
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    Graphical View of Domain Structure for InterPro Entry P06756

    ProtoNet protein and cluster: P06756

    3 Blocks protein families:
    IPB000413 Integrins alpha chain
    IPB013513 Integrin alpha chain
    IPB013517 FG-GAP


    UniProtKB/Swiss-Prot: ITAV_HUMAN, P06756
    Similarity: Belongs to the integrin alpha chain family
    Similarity: Contains 7 FG-GAP repeats

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGAV)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGAV)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_002210

                  Applied Biosystems Silencer® siRNAs for ITGAV

                  Sigma-Aldrich siRNA and siRNA Panels for ITGAV  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGAV  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001144999
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001144999
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001144999 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_002210

    UniProtKB/Swiss-Prot: ITAV_HUMAN, P06756
    Function: The alpha-V integrins are receptors for vitronectin, cytotactin, fibronectin, fibrinogen,
    laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin and
    vWF. They recognize the sequence R-G-D in a wide array of ligands. In case of HIV-1 infection, the
    interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma
    lesions

    Genatlas biochemistry entry for ITGAV:
    integrin,alpha V,cell surface adhesion receptor mediating cell-adhesion to extra cellular matrix or
    to other cells,through hetero dimerization and connecting to the cytoskeleton and various
    signaling molecules within cells,dimerizing with ITGB3 in vitronectin,fibrinogen,von Willebrand
    factor,thrombospondin,fibronectin,osteopontin,collagen receptors;with ITGB1 or ITGB5 in
    vitronectin receptor;with ITGB6 in fibronectin receptor

    15 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Itgav):

    craniofacialdigestive/alimentaryembryogenesisendocrine/exocrine gland
    growth/sizehematopoietic systemhomeostasis/metabolismimmune systemlethality-prenatal/perinatal
    life span-post-weaning/agingmusclenervous systemskeletontumorigenesis

    3 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872 receptor activity IEA--
    GO:0005509 calcium ion binding IEA--
    GO:0005515 protein binding IPI11877390
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/7 Invitrogen iPath™ Online BioAtlas - Pathways for ITGAV (see all 7 ) (Maps provided by GeneGo):
     Integrin-mediated cell-matrix adhesion
     Putative integrins pathway. Part 2
     Receptors. Part D. IL4R-pleckstrin homology proteins interactions
     VEGF-family signaling
     Putative integrins pathway. Part 1

       GeneDecks  ITGAV for the pathways selected above  
    About GeneDecksing

    5 Millipore Pathways for ITGAV
     Cytoskeleton remodeling Integrin outside-in signaling
     Development VEGF-family signaling
     Cytoskeleton remodeling Fibronectin-binding integrins in cell motility
     Cell adhesion Integrin inside-out signaling
     Cell adhesion Endothelial cell contacts by non-junctional mechanisms

       GeneDecks  ITGAV for the pathways selected above  
    About GeneDecksing

    3 Sigma-Aldrich "Your Favorite Gene" Pathways for  ITGAV  (Your Favorite Gene powered by Ingenuity) 
     NF-&kappa
     Integrin Signaling
     Caveolar-mediated Endocytosis

       GeneDecks  ITGAV for the pathways selected above  
    About GeneDecksing

    5/6 Kegg Pathways  (Kegg details for ITGAV) (see all 6 ):
     hsa04510 Focal adhesion
     hsa04512 ECM-receptor interaction
     hsa04514 Cell adhesion molecules (CAMs)
     hsa04810 Regulation of actin cytoskeleton
     hsa05200 Pathways in cancer

       GeneDecks  ITGAV for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  ITGAV 


    5/171 Interacting proteins for ITGAV (ENSP000003640423 P067561, 2) via UniProtKB, MINT, and/or STRING (see all 171 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ANGPTL3Q9Y5C11STRING (score=.961) EBI-298282, EBI-298276
    ITGB3P051061, 2STRING (score=.999) EBI-298282, EBI-702847 MINT-25081 EBI-298282, EBI-702847 MINT-25081
    ITGB3P051061, 2STRING (score=.999) EBI-298282, EBI-702847 MINT-25081 EBI-298282, EBI-702847 MINT-25081
    ITGB5ENSP000002961813STRING (score=.999)
    VTNENSP000002262183STRING (score=.999)
    About this table

    5/10 Gene Ontology (GO) biological process terms (links to tree view) (see all 10 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001568 blood vessel development IEA--
    GO:0007155 cell adhesion TAS2430295
    GO:0007160 cell-matrix adhesion NAS11877390
    GO:0007229 integrin-mediated signaling pathway NAS11877390
    GO:0010745 negative regulation of foam cell differentiation IMP15215180
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Sigma-Aldrich Small Molecules for ITGAV:
    Antagonist

    Browse Tocris compounds for ITGAV
    7 Novoseek chemical compound relationships for ITGAV gene
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    penton 82.68 9 9930328 (2), 9135136 (1), 7533853 (1), 8837891 (1) (see all 7)
    lm 609 68.17 2 12901232 (1), 12379637 (1)
    fibrinogen 32.18 2 9033403 (2)
    calcium 3.37 1 17158881 (1)
    titanium 3.10 1 10817264 (1)
    hydroxyapatite 0.00 2 10817264 (1), 18780564 (1)
    tyrosine 0.00 2 17228150 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGAV)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGAV)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_002210

                  Sigma-Aldrich siRNA and siRNA Panels for ITGAV  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGAV  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_002210  

    REFSEQ mRNAs for ITGAV gene (3 alternative transcripts): 

    NM_001144999.1   NM_001145000.1   NM_002210.3   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_002210  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001144999
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001144999
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001144999 

    Additional cDNA sequence: 

    AB209894.1 AK302550.1 AK302990.1 AK309711.1 BC047454.1 BC072686.1 BC126231.1 BC136442.1 
    BC144100.1 EF560727.1 M14648.1 

    11 DOTS entries:

    DT.99956906  DT.91755266  DT.100795812  DT.91755262  DT.100795820  DT.75107177  DT.120969933  DT.120970004 
    DT.91850420  DT.120969966  DT.95191020 

    24/305 AceView cDNA sequences (see all 305 ):

    CB128487 AU118713 AW778727 AA709042 BX481015 R38032 BQ025424 M14648 
    AI362557 AW272306 CA396552 BM728668 BQ129340 AA044639 AA307350 AA320843 
    T29242 BC072686 AW341935 CB044028 CB138635 AA214606 BU742606 BQ024759 

    highest scoring ESTs for ITGAV:

    M14648 AA029934 AA030046 AA044639 AA044703 AA095243 AA098978 AA214606 AA307350 AA313002 

    Unigene Cluster for ITGAV:

    Integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
    Hs.436873  [show with all ESTs]
    Unigene Representative Sequence: NM_002210


    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for ITGAV

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^
    SP1:                                                                                                                                                            
    SP2:                                -     -                                                                                                                     

    ExUns: 26 ^ 27 ^ 28 ^ 29 ^ 30
    SP1:                              
    SP2:                              

    About this scheme

    ECgene alternative splicing isoforms for ITGAV

    2 Ensembl transcripts including schematic representations:
    ENST00000374907  ENST00000261023  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ITGAV expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ITGAV

    1 / 2 / 3

    5 probe-sets matching ITGAV gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    39071_at2, 3 U95-A 1 1.00 1.00 0.83 1.16 M14648 1.00 1.00 1.00 1

    257_at2, 3 U95-A 1 1.00 1.00 0.90 0.62 M14648 1.00 1.00 1.00 1
    2032_s_at2, 3 U95-A 1 1.00 1.00 0.59 1.23 U07375 0.20 1.00 0.72 1

    202351_at2, 3 U133-A 1 1.00 1.00 -- -- AI093579 0.80 1.00 0.91 1

    202351_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    GeneDecks  ITGAV for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TAACTTGTGA

    SOURCE GeneReport for Unigene cluster: Hs.436873

    Expression variation in blood from EXPOLDB for ITGAV

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ITGAV gene from 5/11 species (see all 11 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ITGAV1   -- integrin, alpha V (vitronectin receptor, alpha polypeptide, more 89.7(n)
    95.12(a)
    488437  XM_845896.1  XP_850989.1 
    chimpanzee
    (Pan troglodytes)
    ITGAV1   -- integrin, alpha V (vitronectin receptor, alpha polypeptide, more 99.65(n)
    99.9(a)
    459807  XM_515967.2  XP_515967.2 
    cow
    (Bos taurus)
    ITGAV1   -- integrin, alpha V (vitronectin receptor, alpha polypeptide, more 91.98(n)
    95.51(a)
    281875  NM_174367.1  NP_776792.1 
    rat
    (Rattus norvegicus)
    Itgav1   -- integrin alpha V 84.64(n)
    89.68(a)
    296456  XM_230950.4  XP_230950.4 
    mouse
    (Mus musculus)
    Itgav1, 5 2 (46.00 cM)5
    integrin alpha V1, 5 87.09(n)1
    92.33(a)1
    164101  NM_008402.11  NP_032428.11 
     AK0034165  AK0364855  (see all 22)
    About this table        Species with no ortholog for ITGAV

    ENSEMBL Gene Tree for ITGAV
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ITGAV gene
    ITGA82  ITGA2B2  ITGA52  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/523 NCBI SNPs in ITGAV are shown (see all 523 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 143)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 2 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs119021711,2
    A,C,F,H187251472(+) CGGCTG/CTCAGA 1 -- ut31 ese311Minor allele frequency- C:0.15EU EA WA NA 970
    rs22306161,2
    C,F,H187240662(+) ATCATA/GTCTTT 1 I/V mis1 ese39Minor allele frequency- G:0.05MN EU EA WA 874
    rs67397871,2
    C,F,H187161120(+) ATTTCC/TTCTCT 1 -- ng51 trp38Minor allele frequency- T:0.01EU EA WA 834
    --
    rs134193071,2
    A,F,H187161598(+) ttatcG/Ataacc 1 -- ng51 tfbs34Minor allele frequency- A:0.08EU EA WA 420
    rs37389181,2
    C,F,H187219711(+) TTTATA/GTCTTC 1 I/V mis1 ese311Minor allele frequency- G:0.04NA EU EA WA 968
    rs75569711,2
    F,H187251547(+) AGTTCG/ATTAGT 1 -- ut314Minor allele frequency- A:0.01EU EA WA 410
    rs18391231,2
    C,F187251619(-) CTACAG/AAGCCA 1 -- ut31 ese33Minor allele frequency- A:0.24NA 142
    rs118914611,2
    C,F187251368(+) GGAATA/TAAAAC 1 -- ut313Minor allele frequency- T:0.12NA 142
    --
    rs22306151,2
    F187229296(+) GCAGGT/GCCCCA 1 A/S mis18Minor allele frequency- G:0.01MN NA EU EA WA 592
    rs10542641,2
    F187253730(+) CACCCA/CCATTG 1 -- ut311Minor allele frequency- C:0.02MN 184
    About this table

    HapMap Linkage Disequilibrium images for ITGAV (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 193210

    10/27 Novoseek disease relationships for ITGAV gene (see all 27 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    adenovirus infections 41.16 3 7533853 (2), 9930328 (1)
    metastasis 32.87 19 18427826 (4), 12629984 (2), 16631833 (1), 18794119 (1) (see all 10)
    tumors 29.14 22 18357713 (3), 9159820 (2), 12901232 (1), 7538977 (1) (see all 16)
    osteosarcoma 22.25 10 18854653 (6), 10429943 (2)
    carcinoma lobular 21.70 3 8548120 (2), 7680285 (1)
    colon carcinoma 21.61 1 9223381 (1)
    cancer 19.99 8 18427826 (2), 18357713 (2), 17786296 (1), 17955485 (1) (see all 5)
    melanoma 16.88 7 1285050 (1), 7538977 (1), 1376331 (1), 8641196 (1) (see all 5)
    breast carcinoma 14.22 2 8548120 (2)
    carcinoma 11.99 5 18427826 (2), 12716042 (1), 9159820 (1)
    About this table

    Human Genome Epidemiology Navigator: ITGAV (4 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/387 PubMed articles for ITGAV gene (see all 387 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 3685 HGNC: 6150 AceView: ITGAV Ensembl:ENSG00000138448 euGenes: HUgn3685
    ECgene: ITGAV H-InvDB: ITGAV
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for ITGAV Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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