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ITGA2 Gene

protein-coding   GIFtS: 68

GC05P052321
integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: CD49B)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
BR 2, 5
CD49B 2, 3, 5
CD49b 1
GPIa 2, 3
VLA-2 2
VLAA2 2
Descriptions
CD49 antigen-like family member B 3
CD49b antigen 3
Collagen receptor 3
Platelet membrane glycoprotein Ia 3
VLA-2 alpha chain 3
integrin alpha 2 2
integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2
receptor) 2
platelet antigen Br 2
platelet glycoprotein GPIa 2
platelet glycoprotein Ia 2
very late activation protein 2 receptor, alpha-2 subunit 2
External Ids
HGNC: 61371
Entrez Gene: 36732
UniProtKB: P173013
Ensembl: ENSG000001641717
Search outside databases for aliases for ITGA2 gene

Previous GC identifers: GC05P052449 GC05P053715 GC05P052255 GC05P052301

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ITGA2:
This gene product belongs to the integrin alpha chain family. Integrins are heterodimeric integral
membrane glycoproteins composed of a distinct alpha chain and a common beta chain. They are found
on a wide variety of cell types including, T cells, fibroblasts and platelets. Integrins are
involved in cell adhesion and also participate in cell-surface mediated signalling. [provided by
RefSeq]

UniProtKB/Swiss-Prot: ITA2_HUMAN, P17301
Function: Integrin alpha-2/beta-1 is a receptor for laminin, collagen, collagen C-propeptides,
fibronectin and E-cadherin. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in
collagen. It is responsible for adhesion of platelets and other cells to collagens, modulation of
collagen and collagenase gene expression, force generation and organization of newly synthesized
extracellular matrix

Gene Wiki entry for ITGA2 (CD49b)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ITGA2 gene  

Entrez Gene cytogenetic band: 5q23-q31   Ensembl cytogenetic band:  5q11.2   HGNC cytogenetic band: 5q11.2

ITGA2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P052321:     (about GC identifiers)

Start:
52,320,913 bp from pter
End:
52,426,366 bp from pter
Size:
105,454 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000005.8  NT_006713.14  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: ITA2_HUMAN, P17301 (See protein sequence)
Recommended Name: Integrin alpha-2 precursor  
Size: 1181 amino acids; 129295 Da
Subunit: Heterodimer of an alpha and a beta subunit. Alpha-2 associates with beta-1. Interacts with
HPS5 and RAB21. Binds to human echoviruses 1 and 8 capsid proteins and acts as a receptor for
these viruses. Interacts (via ITAG2 I-domain) with rotavirus A VP4; this interaction only occurs
in rotavirus integrin-dependent strains, for which ITGA2 acts as a receptor
Subcellular location: Membrane; Single-pass type I membrane protein
PDB structures from and Proteopedia :
1AOX (3D)    1DZI (3D)    1PQB (3D)    1V7P (3D)    
Secondary accessions: Q14595

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_002194.2  

    ENSEMBL proteins: 
    ENSP00000296585 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Integrin alpha 2, Integrin alpha 2+beta 1)
    Browse Abnova for Human Recombinant Proteins
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    4 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886 plasma membrane TAS1763388 2545729
    GO:0008305 integrin complex TAS2545729
    GO:0009897 external side of plasma membrane IEA--
    GO:0016021 integral to membrane IEA--
    About this table

    Antibodies for ITGA2: 
    Browse Antibodies Central at Invitrogen
    Millipore Mono- and Polyclonal Antibodies for the study of ITGA2
    Sigma-Aldrich Antibodies for ITGA2
    R&D Systems Antibodies for ITGA2 (Integrin alpha 2/CD49b)
    Antibodies from Abcam (Integrin alpha 2, Integrin alpha 2+beta 1), each with their AbpromiseSM
    Browse Abnova for Monoclonal and Polyclonal Antibodies
    Novus Biologicals Antibodies for ITGA2

    Assays for ITGA2: 
    Browse Invitrogen for biochemical assays
    Millipore Kits and Assays for the Analysis of ITGA2
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/7 InterPro domains/families (see all 7 ):
     IPR000413 Integrin_alpha
     IPR013519 Int_alpha_beta-p
     IPR018184 Integrin_alpha_C_CS
     IPR013517 FG-GAP
     IPR013649 Integrin_alpha-2


       GeneDecks  ITGA2 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P17301

    ProtoNet protein and cluster: P17301

    4 Blocks protein families:
    IPB000413 Integrins alpha chain
    IPB002035 Von Willebrand factor type A domain signature
    IPB013513 Integrin alpha chain
    IPB013517 FG-GAP


    UniProtKB/Swiss-Prot: ITA2_HUMAN, P17301
    Domain: The integrin I-domain (insert) is a VWFA domain. Integrins with I-domains do not undergo
    protease cleavage
    Similarity: Belongs to the integrin alpha chain family
    Similarity: Contains 7 FG-GAP repeats
    Similarity: Contains 1 VWFA domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGA2)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGA2)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002203

                  Applied Biosystems Silencer® siRNAs for ITGA2

                  Sigma-Aldrich siRNA and siRNA Panels for ITGA2  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGA2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_002203
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_002203
                                     untagged cDNA clone in CMV expression vector: NM_002203 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_002203

    UniProtKB/Swiss-Prot: ITA2_HUMAN, P17301
    Function: Integrin alpha-2/beta-1 is a receptor for laminin, collagen, collagen C-propeptides,
    fibronectin and E-cadherin. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in
    collagen. It is responsible for adhesion of platelets and other cells to collagens, modulation of
    collagen and collagenase gene expression, force generation and organization of newly synthesized
    extracellular matrix

    Genatlas biochemistry entry for ITGA2:
    integrin,alpha 2,cell surface adhesion receptor mediating cell-adhesion to extra cellular matrix or
    to other cells,through hetero dimerization and connecting to the cytoskeleton and various
    signaling molecules within cells,component of VLA-2 receptor,dimerizing with ITGB1 in
    collagen,laminin receptors

    6 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Itga2):

    cellularendocrine/exocrine glandhematopoietic systemhomeostasis/metabolismnormal
    reproductive system

    5 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000287 magnesium ion binding IEA--
    GO:0004872 receptor activity IEA--
    GO:0005509 calcium ion binding IEA--
    GO:0005518 collagen binding TAS9391074
    GO:0042802 identical protein binding IPI14681217
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    4 Invitrogen iPath™ Online BioAtlas - Pathways for ITGA2 (Maps provided by GeneGo):
     Putative integrins pathway. Part 2
     Role of AP-1 in regulation of cellular metabolism
     Putative integrins pathway. Part 1
     Putative FAK1 pathway

       GeneDecks  ITGA2 for the pathways selected above  
    About GeneDecksing

    5 Millipore Pathways for ITGA2
     Cell adhesion Integrin-mediated cell adhesion and migration
     Cytoskeleton remodeling Integrin outside-in signaling
     Cytoskeleton remodeling FAK signaling
     Cell adhesion Integrin inside-out signaling
     Cell adhesion Endothelial cell contacts by non-junctional mechanisms

       GeneDecks  ITGA2 for the pathways selected above  
    About GeneDecksing

    5/15 Sigma-Aldrich "Your Favorite Gene" Pathways for  ITGA2  (Your Favorite Gene powered by Ingenuity) (see all 15
     Caveolar-mediated Endocytosis
     Neuregulin Signaling
     Ephrin Receptor Signaling
     Reelin Signaling in Neurons
     NF-&kappa

       GeneDecks  ITGA2 for the pathways selected above  
    About GeneDecksing

    5/6 Kegg Pathways  (Kegg details for ITGA2) (see all 6 ):
     hsa04510 Focal adhesion
     hsa04512 ECM-receptor interaction
     hsa04640 Hematopoietic cell lineage
     hsa04810 Regulation of actin cytoskeleton
     hsa05200 Pathways in cancer

       GeneDecks  ITGA2 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  ITGA2 


    5/134 Interacting proteins for ITGA2 (ENSP000002965853 P173011, 2) via UniProtKB, MINT, and/or STRING (see all 134 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    COL1A2P081232STRING (score=.99) MINT-4792053
    ITGA2P173011EBI-702960, EBI-702960
    CIB1Q998282MINT-1894979
    PDIA3P301012MINT-4301430
    WASLO004012MINT-1895068
    About this table

    5 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007155 cell adhesion TAS10201960 10942362
    GO:0007160 cell-matrix adhesion TAS2545729
    GO:0007229 integrin-mediated signaling pathway IEA--
    GO:0007596 blood coagulation TAS2933589
    GO:0009887 organ morphogenesis TAS9391074
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for ITGA2
    10/45 Novoseek chemical compound relationships for ITGA2 gene (see all 45 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    bacteriorhodopsin 96.77 1404 15842995 (8), 16039842 (7), 8874028 (7), 12058039 (7) (see all 99)
    bacterioopsin 83.99 31 8652531 (3), 2344462 (2), 8580348 (2), 2350173 (1) (see all 8)
    convulxin 65.19 2 12881531 (1)
    hydrogen 59.16 143 15842995 (6), 8349659 (4), 10694399 (4), 15298873 (3) (see all 62)
    tyrosinate 54.96 6 1653012 (2), 2167129 (1), 2060632 (1)
    beta-ionone 54.26 1 8652531 (1)
    matrigel 46.64 2 18554474 (1), 8985098 (1)
    adp 43.63 13 15850609 (1), 14734152 (1), 18253477 (1), 16381175 (1) (see all 9)
    fibrinogen 43.21 9 7503943 (1), 10168553 (1), 10554707 (1), 15665914 (1) (see all 9)
    grgdsp 40.86 1 1331077 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ITGA2)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ITGA2)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002203

                  Sigma-Aldrich siRNA and siRNA Panels for ITGA2  
                         Sigma-Aldrich shRNA Panels and shRNA for ITGA2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_002203  

    REFSEQ mRNAs for ITGA2 gene: 

    NM_002203.3   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_002203  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_002203
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_002203
                                     untagged cDNA clone in CMV expression vector: NM_002203 

    Additional cDNA sequence: 

    AK307952.1 BC143505.1 BC143508.1 BC143509.1 BC143511.1 BC143512.1 X17033.1 

    7 DOTS entries:

    DT.113328  DT.97818767  DT.40296409  DT.91687975  DT.40126600  DT.97806649  DT.91827777 

    24/135 AceView cDNA sequences (see all 135 ):

    CA419950 BU632208 BQ001409 BM826223 BM798135 CK904145 BU676023 BU782863 
    BQ000380 AA307466 AA991803 BG771368 AI309192 CK904146 AI339858 AI538195 
    AA236162 BQ101227 CB241295 AA532551 BM987549 CK823194 CA442768 BM979113 

    highest scoring ESTs for ITGA2:

    X17033 AA069027 AA069096 AA186802 AA236162 AA236687 AA307466 AA311146 AA362330 AA366875 

    Unigene Cluster for ITGA2:

    Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
    Hs.482077  [show with all ESTs]
    Unigene Representative Sequence: NM_002203


    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for ITGA2

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^
    SP1:                                                                                                                                                            
    SP2:                          -     -                                                                                                                           

    ExUns: 24 ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30
    SP1:                                          
    SP2:                                          

    About this scheme

    ECgene alternative splicing isoforms for ITGA2

    1 Ensembl transcript including schematic representation:
    ENST00000296585  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ITGA2 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ITGA2

    1 / 2 / 3

    7 probe-sets matching ITGA2 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    46919_at2, 3 U95-B 1 1.00 1.00 1.00 1.00 N95414 0.60 1.00 0.82 1

    1978_at2, 3 U95-A 1 1.00 1.00 -0.13 0.28 X17033 1.00 0.90 0.95 1

    41481_at2, 3 U95-A 1 1.00 1.00 0.50 0.47 X17033 1.00 0.90 0.95 1

    205032_at2, 3 U133-A 1 1.00 1.00 -- -- NM_002203 0.60 1.00 0.82 1

    227314_at2, 3 U133-B 1 1.00 1.00 -- -- N95414 0.60 1.00 0.82 1

    205032_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    227314_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TTTGTACAAA

    SOURCE GeneReport for Unigene cluster: Hs.482077
    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ITGA2 gene from 5/8 species (see all 8 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ITGA21   -- integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 more 88.61(n)
    87.09(a)
    489208  XM_546326.2  XP_546326.2 
    chimpanzee
    (Pan troglodytes)
    ITGA21   -- integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 more 99.55(n)
    99.66(a)
    471550  XM_526928.2  XP_526928.2 
    cow
    (Bos taurus)
    ITGA21   -- integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 more 88.15(n)
    86.51(a)
    281872  XM_613651.3  XP_613651.3 
    rat
    (Rattus norvegicus)
    Itga21   -- integrin, alpha 2 83.28(n)
    81.75(a)
    170921  XM_345156.3  XP_345157.3 
    mouse
    (Mus musculus)
    Itga21, 5 13 (64.00 cM)5
    integrin alpha 21, 5 83.08(n)1
    82.51(a)1
    163981  NM_008396.21  NP_032422.21 
     AK0365725  AK0510505  (see all 9)
    About this table        Species with no ortholog for ITGA2

    ENSEMBL Gene Tree for ITGA2
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ITGA2 gene
    ITGA12  ITGA112  ITGA102  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section

    UniProtKB/Swiss-Prot: ITA2_HUMAN, P17301
    Polymorphism: Position 534 is associated with platelet-specific alloantigen HPA-5 (Br).
    HPA-5A/Br(a) has Lys-534 and HPA-5B/Br(b) has Glu-534. HPA-5B is involved in neonatal alloimmune
    thrombocytopenia (NAIT or NATP). The Lys-534-Glu polymorphism may play a role in coronary artery
    disease (CAD)


    10/833 NCBI SNPs in ITGA2 are shown (see all 833 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 425)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 5 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs10423241,2
    A,C,F,H,O52423438(+) AGTAAG/AACATC 1 -- ut317Minor allele frequency- A:0.10NA EU EA WA 562
    rs266801,2
    A,C,F,H,O52320143(+) TGTCAC/TGGTGT 1 -- ng5125Minor allele frequency- T:0.32EU EA WA NS NA 3502
    rs266791,2
    A,C,F,H,O52319932(+) CAGTTG/CGTTCC 1 -- ng5128Minor allele frequency- C:0.46MN EU EA WA NS NA 4084
    rs77252461,2
    A,C,F,H52426172(+) GTACAA/CAAAGT 1 -- ut3111Minor allele frequency- C:0.33NA EU EA WA 974
    rs104718301,2
    A,C,F,H52426284(+) TGTAAC/GCCACT 1 -- ut317Minor allele frequency- G:0.10EU EA WA NA 560
    rs11095271,2
    C,F,H,O52422907(-) CCTTAG/TTCTCT 1 -- ut3124Minor allele frequency- T:0.24EA NA EU WA NS MN 1890
    rs77198481,2
    A,C,F,H52425212(+) AAGGTG/AAGTAT 1 -- ut3116Minor allele frequency- A:0.39EA NA EU WA 1470
    rs11095261,2
    C,F,H,O52423080(-) TTTCAA/GAAATT 1 -- ut31 ese316Minor allele frequency- G:0.46EU EA WA NS MN NA 2726
    rs68800551,2
    C,F,H52425185(+) GCAGTA/GTTTCT 1 -- ut314Minor allele frequency- G:0.27EU EA WA 416
    --
    rs77374121,2
    C,F,H52425350(+) AAATGG/ATGTAC 1 -- ut314Minor allele frequency- A:0.09EU EA WA 420
    About this table

    HapMap Linkage Disequilibrium images for ITGA2 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 192974

    10/62 Novoseek disease relationships for ITGA2 gene (see all 62 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    collagen fibril 40.39 1 16854461 (1)
    arterial thrombosis 40.17 1 9701455 (1)
    glanzmann thrombasthenia 37.05 1 10097812 (1)
    metastasis 32.68 18 7681030 (2), 2011740 (1), 9306710 (1), 14735469 (1) (see all 11)
    thrombosis 28.57 3 17164499 (1), 18045662 (1), 12617110 (1)
    bernard-soulier syndrome 27.48 1 10097812 (1)
    osteosarcoma 26.88 3 8326445 (1), 9716443 (1)
    rhabdomyosarcoma 23.32 6 2011740 (2), 9306710 (1), 8674074 (1), 7630001 (1)
    colon carcinoma 20.54 4 18098323 (1), 11169447 (1), 2304917 (1)
    gingival overgrowth 17.35 1 16304451 (1)
    About this table

    Genatlas disease: ITGA2
    neonatal alloimmune thrombocytopenia

    Human Gene Mutation Database: ITGA2
    Genetic Association Database: ITGA2
    Human Genome Epidemiology Navigator: ITGA2 (93 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/654 PubMed articles for ITGA2 gene (see all 654 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 3673 HGNC: 6137 AceView: ITGA2 Ensembl:ENSG00000164171 euGenes: HUgn3673
    ECgene: ITGA2 H-InvDB: ITGA2
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for ITGA2 Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.genetests.org/query?gene=ITGA2
    SeattleSNPshttp://pga.gs.washington.edu/data/itga2/
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for ITGA2:
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      Free SNP selection tool



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     Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
     Antibodies for ITGA2

    GeneCards Homepage    -    Last full update: 2 Jul 2009        Incremental update: 13 Oct 2009

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