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Aliases for ITCH-IT1 Gene

Subcategory (RNA class) for ITCH-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ITCH-IT1 Gene

  • ITCH Intronic Transcript 1 2 3 5
  • ITCH Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ITCH-IT1 Gene

Previous GeneCards Identifiers for ITCH-IT1 Gene

  • GC00U933815
  • GC20P033039

Summaries for ITCH-IT1 Gene

GeneCards Summary for ITCH-IT1 Gene

ITCH-IT1 (ITCH Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ITCH-IT1 Gene

Genomics for ITCH-IT1 Gene

Regulatory Elements for ITCH-IT1 Gene

Enhancers for ITCH-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G034407 1.2 ENCODE dbSUPER 11.8 -42.9 -42899 1.0 FOXA2 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 MAP1LC3A ITCH-AS1 ITCH ITCH-IT1 TP53INP2 CDC42P1
GH20G034399 1 ENCODE dbSUPER 11.8 -49.9 -49899 3.0 SOX13 ZMYM3 CEBPG RARA YY1 ZKSCAN1 TEAD3 ZNF316 NR2F6 MAFK MAP1LC3A ITCH ITCH-AS1 ITCH-IT1 GC20M034402 ENSG00000201498
GH20G034410 0.6 ENCODE dbSUPER 12.9 -40.4 -40401 0.2 MNT ITCH-AS1 ITCH-IT1 ITCH CDC42P1
GH20G034461 0.8 ENCODE 0.4 +10.5 10481 0.2 NFIB TAL1 CHAMP1 FOSL1 CCNT2 TCF12 FOXM1 GATA3 GATA2 ELK1 ITCH GC20P034469 ITCH-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ITCH-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ITCH-IT1 Gene

34,450,930 bp from pter
34,454,552 bp from pter
3,623 bases
Plus strand

Genomic View for ITCH-IT1 Gene

Genes around ITCH-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ITCH-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ITCH-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ITCH-IT1 Gene

Proteins for ITCH-IT1 Gene

Post-translational modifications for ITCH-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ITCH-IT1 Gene

Domains & Families for ITCH-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ITCH-IT1 Gene

Function for ITCH-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ITCH-IT1 Gene

Localization for ITCH-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ITCH-IT1 Gene

Pathways & Interactions for ITCH-IT1 Gene

SuperPathways for ITCH-IT1 Gene

No Data Available

Interacting Proteins for ITCH-IT1 Gene

Gene Ontology (GO) - Biological Process for ITCH-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ITCH-IT1 Gene

Drugs & Compounds for ITCH-IT1 Gene

No Compound Related Data Available

Transcripts for ITCH-IT1 Gene

mRNA/cDNA for ITCH-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ITCH-IT1 Gene

No ASD Table

Relevant External Links for ITCH-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ITCH-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ITCH-IT1 Gene

genes like me logo Genes that share expression patterns with ITCH-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ITCH-IT1 Gene

Orthologs for ITCH-IT1 Gene

Evolution for ITCH-IT1 Gene

Gene Tree for ITCH-IT1 (if available)
Gene Tree for ITCH-IT1 (if available)

No data available for Orthologs for ITCH-IT1 Gene

Paralogs for ITCH-IT1 Gene

No data available for Paralogs for ITCH-IT1 Gene

Variants for ITCH-IT1 Gene

Relevant External Links for ITCH-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ITCH-IT1 Gene

Disorders for ITCH-IT1 Gene

No disorders were found for ITCH-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ITCH-IT1 Gene

Publications for ITCH-IT1 Gene

  1. cir-ITCH plays an inhibitory role in colorectal cancer by regulating the Wnt/I^-catenin pathway. (PMID: 26110611) Huang G. … Chen X. (PLoS ONE 2015) 3 64
  2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 64

Products for ITCH-IT1 Gene

Sources for ITCH-IT1 Gene

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