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Aliases for ISM1-AS1 Gene

Subcategory (RNA class) for ISM1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ISM1-AS1 Gene

  • ISM1 Antisense RNA 1 2 3 5
  • ISM1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ISM1-AS1 Gene

Previous GeneCards Identifiers for ISM1-AS1 Gene

  • GC20M013220

Summaries for ISM1-AS1 Gene

GeneCards Summary for ISM1-AS1 Gene

ISM1-AS1 (ISM1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ISM1-AS1 Gene

Genomics for ISM1-AS1 Gene

Regulatory Elements for ISM1-AS1 Gene

Enhancers for ISM1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around ISM1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ISM1-AS1 Gene

Chromosome:
20
Start:
13,237,420 bp from pter
End:
13,239,687 bp from pter
Size:
2,268 bases
Orientation:
Minus strand

Genomic View for ISM1-AS1 Gene

Genes around ISM1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ISM1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ISM1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ISM1-AS1 Gene

Proteins for ISM1-AS1 Gene

Post-translational modifications for ISM1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ISM1-AS1 Gene

Domains & Families for ISM1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ISM1-AS1 Gene

Function for ISM1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ISM1-AS1 Gene

Localization for ISM1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ISM1-AS1 Gene

Pathways & Interactions for ISM1-AS1 Gene

SuperPathways for ISM1-AS1 Gene

No Data Available

Interacting Proteins for ISM1-AS1 Gene

Gene Ontology (GO) - Biological Process for ISM1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ISM1-AS1 Gene

Drugs & Compounds for ISM1-AS1 Gene

No Compound Related Data Available

Transcripts for ISM1-AS1 Gene

mRNA/cDNA for ISM1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ISM1-AS1 Gene

ISM1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ISM1-AS1 Gene

No ASD Table

Relevant External Links for ISM1-AS1 Gene

GeneLoc Exon Structure for
ISM1-AS1
ECgene alternative splicing isoforms for
ISM1-AS1

Expression for ISM1-AS1 Gene

mRNA expression in normal human tissues for ISM1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ISM1-AS1 Gene

This gene is overexpressed in Testis (x13.5).

SOURCE GeneReport for Unigene cluster for ISM1-AS1 Gene:

Hs.665253
genes like me logo Genes that share expression patterns with ISM1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ISM1-AS1 Gene

Orthologs for ISM1-AS1 Gene

Evolution for ISM1-AS1 Gene

ENSEMBL:
Gene Tree for ISM1-AS1 (if available)
TreeFam:
Gene Tree for ISM1-AS1 (if available)

No data available for Orthologs for ISM1-AS1 Gene

Paralogs for ISM1-AS1 Gene

No data available for Paralogs for ISM1-AS1 Gene

Variants for ISM1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ISM1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv4247n100 CNV gain 25217958
esv3893288 CNV gain 25118596
nsv1058035 CNV loss 25217958
nsv1060853 CNV gain 25217958
nsv518184 CNV gain 19592680

Relevant External Links for ISM1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ISM1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for ISM1-AS1 Gene

Disorders for ISM1-AS1 Gene

Relevant External Links for ISM1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ISM1-AS1

No disorders were found for ISM1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ISM1-AS1 Gene

Publications for ISM1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for ISM1-AS1 Gene

Sources for ISM1-AS1 Gene

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