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Aliases for IQCJ Gene

Aliases for IQCJ Gene

  • IQ Motif Containing J 2 3

External Ids for IQCJ Gene

Previous GeneCards Identifiers for IQCJ Gene

  • GC03U900617
  • GC03P160269
  • GC03P158680
  • GC03P156182

Summaries for IQCJ Gene

GeneCards Summary for IQCJ Gene

IQCJ (IQ Motif Containing J) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IQCJ Gene

Genomics for IQCJ Gene

Regulatory Elements for IQCJ Gene

Genomic Location for IQCJ Gene

Start:
158,962,928 bp from pter
End:
159,266,307 bp from pter
Size:
303,380 bases
Orientation:
Plus strand

Genomic View for IQCJ Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IQCJ Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCJ Gene

Proteins for IQCJ Gene

  • Protein details for IQCJ Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q1A5X6-IQCJ_HUMAN
    Recommended name:
    IQ domain-containing protein J
    Protein Accession:
    Q1A5X6
    Secondary Accessions:
    • B7ZMM2
    • B9EH97
    • Q1A5X5

    Protein attributes for IQCJ Gene

    Size:
    159 amino acids
    Molecular mass:
    18226 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for IQCJ Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IQCJ Gene

Proteomics data for IQCJ Gene at MOPED

Post-translational modifications for IQCJ Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IQCJ Gene

No data available for DME Specific Peptides for IQCJ Gene

Domains for IQCJ Gene

Protein Domains for IQCJ Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IQCJ Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q1A5X6

UniProtKB/Swiss-Prot:

IQCJ_HUMAN :
  • Q1A5X6
Domain:
  • Contains 1 IQ domain.
genes like me logo Genes that share domains with IQCJ: view

No data available for Gene Families for IQCJ Gene

Function for IQCJ Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IQCJ Gene

Localization for IQCJ Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IQCJ Gene COMPARTMENTS Subcellular localization image for IQCJ gene
Compartment Confidence
cytosol 3
nucleus 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for IQCJ Gene

Pathways for IQCJ Gene

SuperPathways for IQCJ Gene

No Data Available

Interacting Proteins for IQCJ Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000402153%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000402153 for IQCJ Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for IQCJ Gene

None

No data available for Pathways by source for IQCJ Gene

Transcripts for IQCJ Gene

mRNA/cDNA for IQCJ Gene

(6) Additional mRNA sequences :
(3) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IQCJ Gene

IQ motif containing J:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for IQCJ

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IQCJ Gene

No ASD Table

Relevant External Links for IQCJ Gene

GeneLoc Exon Structure for
IQCJ
ECgene alternative splicing isoforms for
IQCJ

Expression for IQCJ Gene

mRNA expression in normal human tissues for IQCJ Gene

mRNA differential expression in normal tissues according to GTEx for IQCJ Gene

This gene is overexpressed in Testis (10.8), Pituitary (4.8), and Brain - Amygdala (4.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for IQCJ Gene

SOURCE GeneReport for Unigene cluster for IQCJ Gene Hs.570685

genes like me logo Genes that share expressions with IQCJ: view

Expression partners for IQCJ Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for IQCJ Gene

Orthologs for IQCJ Gene

This gene was present in the common ancestor of chordates.

Orthologs for IQCJ Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Iqcj 35
  • 88.55 (n)
  • 88.89 (a)
Iqcj 16
Iqcj 36
  • 81 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia IQCJ 35
  • 99.58 (n)
  • 99.37 (a)
IQCJ 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia IQCJ 36
  • 78 (a)
OneToOne
dog
(Canis familiaris)
Mammalia IQCJ 36
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia IQCJ 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia IQCJ 36
  • 70 (a)
OneToOne
chicken
(Gallus gallus)
Aves IQCJ 36
  • 41 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia IQCJ 36
  • 66 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii IQCJ 36
  • 45 (a)
OneToOne
Species with no ortholog for IQCJ:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IQCJ Gene

ENSEMBL:
Gene Tree for IQCJ (if available)
TreeFam:
Gene Tree for IQCJ (if available)

Paralogs for IQCJ Gene

Selected SIMAP similar genes for IQCJ Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with IQCJ: view

No data available for Paralogs for IQCJ Gene

Variants for IQCJ Gene

Structural Variations from Database of Genomic Variants (DGV) for IQCJ Gene

Variant ID Type Subtype PubMed ID
nsv877692 CNV Loss 21882294
nsv470971 CNV Gain 18288195
nsv877694 CNV Gain 21882294
nsv437890 CNV Loss 16468122
esv23950 CNV Loss 19812545
esv2421756 CNV Deletion 20811451
esv2726104 CNV Deletion 23290073
esv2656480 CNV Deletion 23128226
esv24169 CNV Loss 19812545
esv2516721 CNV Insertion 19546169

Relevant External Links for IQCJ Gene

HapMap Linkage Disequilibrium report
IQCJ

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for IQCJ Gene

Disorders for IQCJ Gene

No disorders were found for IQCJ Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for IQCJ Gene

Publications for IQCJ Gene

  1. IQCJ-SCHIP1, a novel fusion transcript encoding a calmodulin-binding IQ motif protein. (PMID: 17045569) Kwasnicka-Crawford D.A. … Scherer S.W. (Biochem. Biophys. Res. Commun. 2006) 2 3 4
  2. Schwannomin-interacting protein-1 isoform IQCJ-SCHIP-1 is a late component of nodes of Ranvier and axon initial segments. (PMID: 18550753) Martin P.M. … Goutebroze L. (J. Neurosci. 2008) 3
  3. Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes. (PMID: 22118674) Altun M. … Kessler B.M. (Chem. Biol. 2011) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4

Products for IQCJ Gene

Sources for IQCJ Gene

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