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Aliases for IQCH-AS1 Gene

Subcategory (RNA class) for IQCH-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for IQCH-AS1 Gene

  • IQCH Antisense RNA 1 2 3
  • IQCH Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IQCH-AS1 Gene

ORGUL Members for IQCH-AS1 Gene

Previous GeneCards Identifiers for IQCH-AS1 Gene

  • GC15M067698

Summaries for IQCH-AS1 Gene

GeneCards Summary for IQCH-AS1 Gene

IQCH-AS1 (IQCH Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for IQCH-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for IQCH-AS1 Gene

Genomics for IQCH-AS1 Gene

Genomic Location for IQCH-AS1 Gene

Start:
67,403,611 bp from pter
End:
67,521,844 bp from pter
Size:
118,234 bases
Orientation:
Minus strand

Genomic View for IQCH-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IQCH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCH-AS1 Gene

No data available for Regulatory Elements for IQCH-AS1 Gene

Proteins for IQCH-AS1 Gene

Post-translational modifications for IQCH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IQCH-AS1 Gene

Domains for IQCH-AS1 Gene

Gene Families for IQCH-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IQCH-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IQCH-AS1 Gene

Function for IQCH-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IQCH-AS1 Gene

Localization for IQCH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IQCH-AS1 Gene

Pathways for IQCH-AS1 Gene

SuperPathways for IQCH-AS1 Gene

No Data Available

Interacting Proteins for IQCH-AS1 Gene

Gene Ontology (GO) - Biological Process for IQCH-AS1 Gene

None

No data available for Pathways by source for IQCH-AS1 Gene

Transcripts for IQCH-AS1 Gene

mRNA/cDNA for IQCH-AS1 Gene

(7) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IQCH-AS1 Gene

IQCH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IQCH-AS1 Gene

No ASD Table

Relevant External Links for IQCH-AS1 Gene

GeneLoc Exon Structure for
IQCH-AS1
ECgene alternative splicing isoforms for
IQCH-AS1

Expression for IQCH-AS1 Gene

mRNA expression in normal human tissues for IQCH-AS1 Gene

SOURCE GeneReport for Unigene cluster for IQCH-AS1 Gene Hs.656245

genes like me logo Genes that share expressions with IQCH-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for IQCH-AS1 Gene

Orthologs for IQCH-AS1 Gene

Evolution for IQCH-AS1 Gene

ENSEMBL:
Gene Tree for IQCH-AS1 (if available)
TreeFam:
Gene Tree for IQCH-AS1 (if available)

No data available for Orthologs for IQCH-AS1 Gene

Paralogs for IQCH-AS1 Gene

No data available for Paralogs for IQCH-AS1 Gene

Variants for IQCH-AS1 Gene

Sequence variations from dbSNP and Humsavar for IQCH-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs868030 -- 67,512,861(-) ttttt(A/G)tagag intron-variant
rs884326 -- 67,513,303(-) ggctt(C/T)gccct intron-variant
rs884327 -- 67,513,227(-) cagcc(A/C)cgacc intron-variant
rs2414964 -- 67,505,364(+) GTTCA(A/G)TAATA intron-variant
rs2414965 -- 67,505,710(+) aaaaa(A/T)tcaga intron-variant

Relevant External Links for IQCH-AS1 Gene

HapMap Linkage Disequilibrium report
IQCH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for IQCH-AS1 Gene

Disorders for IQCH-AS1 Gene

No disorders were found for IQCH-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for IQCH-AS1 Gene

Publications for IQCH-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies. (PMID: 21102462) Elks C.E. … Murray A. (Nat. Genet. 2010) 3

Products for IQCH-AS1 Gene

Sources for IQCH-AS1 Gene

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