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Aliases for IQCH-AS1 Gene

Subcategory (RNA class) for IQCH-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IQCH-AS1 Gene

  • IQCH Antisense RNA 1 2 3 5
  • IQCH Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IQCH-AS1 Gene

Previous GeneCards Identifiers for IQCH-AS1 Gene

  • GC15M067698

Summaries for IQCH-AS1 Gene

GeneCards Summary for IQCH-AS1 Gene

IQCH-AS1 (IQCH Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IQCH-AS1 Gene

Genomics for IQCH-AS1 Gene

Regulatory Elements for IQCH-AS1 Gene

Enhancers for IQCH-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IQCH-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for IQCH-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around IQCH-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for IQCH-AS1 Gene

Chromosome:
15
Start:
67,403,611 bp from pter
End:
67,521,844 bp from pter
Size:
118,234 bases
Orientation:
Minus strand

Genomic View for IQCH-AS1 Gene

Genes around IQCH-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IQCH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IQCH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCH-AS1 Gene

Proteins for IQCH-AS1 Gene

Post-translational modifications for IQCH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IQCH-AS1 Gene

Domains & Families for IQCH-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IQCH-AS1 Gene

Function for IQCH-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IQCH-AS1 Gene

Localization for IQCH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IQCH-AS1 Gene

Pathways & Interactions for IQCH-AS1 Gene

SuperPathways for IQCH-AS1 Gene

No Data Available

Interacting Proteins for IQCH-AS1 Gene

Gene Ontology (GO) - Biological Process for IQCH-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IQCH-AS1 Gene

Drugs & Compounds for IQCH-AS1 Gene

No Compound Related Data Available

Transcripts for IQCH-AS1 Gene

mRNA/cDNA for IQCH-AS1 Gene

(7) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IQCH-AS1 Gene

IQCH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IQCH-AS1 Gene

No ASD Table

Relevant External Links for IQCH-AS1 Gene

GeneLoc Exon Structure for
IQCH-AS1
ECgene alternative splicing isoforms for
IQCH-AS1

Expression for IQCH-AS1 Gene

mRNA expression in normal human tissues for IQCH-AS1 Gene

SOURCE GeneReport for Unigene cluster for IQCH-AS1 Gene Hs.656245

genes like me logo Genes that share expression patterns with IQCH-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for IQCH-AS1 Gene

Orthologs for IQCH-AS1 Gene

Evolution for IQCH-AS1 Gene

ENSEMBL:
Gene Tree for IQCH-AS1 (if available)
TreeFam:
Gene Tree for IQCH-AS1 (if available)

No data available for Orthologs for IQCH-AS1 Gene

Paralogs for IQCH-AS1 Gene

No data available for Paralogs for IQCH-AS1 Gene

Variants for IQCH-AS1 Gene

Sequence variations from dbSNP and Humsavar for IQCH-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs868030 -- 67,512,861(-) ttttt(A/G)tagag intron-variant
rs884326 -- 67,513,303(-) ggctt(C/T)gccct intron-variant
rs884327 -- 67,513,227(-) cagcc(A/C)cgacc intron-variant
rs12594201 -- 67,516,424(+) ctttt(G/T)attct intron-variant
rs12898913 -- 67,515,901(+) tggac(C/T)tccta intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for IQCH-AS1 Gene

Disorders for IQCH-AS1 Gene

Relevant External Links for IQCH-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IQCH-AS1

No disorders were found for IQCH-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IQCH-AS1 Gene

Publications for IQCH-AS1 Gene

  1. Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies. (PMID: 21102462) Elks C.E. … Murray A. (Nat. Genet. 2010) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for IQCH-AS1 Gene

Sources for IQCH-AS1 Gene

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