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Aliases for IQCF5-AS1 Gene

Subcategory (RNA class) for IQCF5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IQCF5-AS1 Gene

  • IQCF5 Antisense RNA 1 2 3 5
  • IQCF5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IQCF5-AS1 Gene

Previous GeneCards Identifiers for IQCF5-AS1 Gene

  • GC03U901798
  • GC03P051911
  • GC03P051874
  • GC03P051876
  • GC03P051878
  • GC03P051880
  • GC03P051887
  • GC03P051889
  • GC03P051891

Summaries for IQCF5-AS1 Gene

GeneCards Summary for IQCF5-AS1 Gene

IQCF5-AS1 (IQCF5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IQCF5-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IQCF5-AS1 Gene

Genomics for IQCF5-AS1 Gene

GeneHancer (GH) Regulatory Elements for IQCF5-AS1 Gene

Promoters and enhancers for IQCF5-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I051902 Enhancer 0.6 ENCODE 11.4 +29.0 28964 0.2 ZNF639 KLF1 SP3 INSM2 ZNF223 KLF17 TSHZ1 JUND ZNF629 FOS IQCF1 IQCF5 IQCF5-AS1 RN7SL504P IQCF3 IQCF4 GPR62 PCBP4 IQCF2
GH03I051903 Promoter 0.6 EPDnew 11.4 +29.8 29777 0.1 CREB1 IQCF1 IQCF5 IQCF5-AS1 RN7SL504P IQCF3 IQCF4 GPR62 PCBP4 RRP9
GH03I051829 Promoter 0.5 EPDnew 11.1 -44.2 -44189 0.1 IQCF3 RN7SL504P IQCF5-AS1 IQCF5 IQCF6 IQCF2 GC03P051793
GH03I051857 Enhancer 0.2 Ensembl 4.2 -16.0 -15995 0.4 IQCF3 IQCF4 IQCF5-AS1 IQCF2 GC03P051793
GH03I051875 Promoter 0.5 EPDnew 0.8 +2.0 2025 0.1 IQCF5 IQCF5-AS1 IQCF1 GC03P051793
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IQCF5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IQCF5-AS1 Gene

Genomic Locations for IQCF5-AS1 Gene
chr3:51,873,596-51,875,767
(GRCh38/hg38)
Size:
2,172 bases
Orientation:
Plus strand
chr3:51,907,612-51,909,783
(GRCh37/hg19)

Genomic View for IQCF5-AS1 Gene

Genes around IQCF5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IQCF5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IQCF5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCF5-AS1 Gene

Proteins for IQCF5-AS1 Gene

Post-translational modifications for IQCF5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IQCF5-AS1 Gene

Domains & Families for IQCF5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IQCF5-AS1 Gene

Function for IQCF5-AS1 Gene

Phenotypes From GWAS Catalog for IQCF5-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IQCF5-AS1 Gene

Localization for IQCF5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IQCF5-AS1 Gene

Pathways & Interactions for IQCF5-AS1 Gene

SuperPathways for IQCF5-AS1 Gene

No Data Available

Interacting Proteins for IQCF5-AS1 Gene

Gene Ontology (GO) - Biological Process for IQCF5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IQCF5-AS1 Gene

Drugs & Compounds for IQCF5-AS1 Gene

No Compound Related Data Available

Transcripts for IQCF5-AS1 Gene

mRNA/cDNA for IQCF5-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IQCF5-AS1 Gene

No ASD Table

Relevant External Links for IQCF5-AS1 Gene

GeneLoc Exon Structure for
IQCF5-AS1
ECgene alternative splicing isoforms for
IQCF5-AS1

Expression for IQCF5-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IQCF5-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IQCF5-AS1 Gene

This gene is overexpressed in Testis (x52.6).
genes like me logo Genes that share expression patterns with IQCF5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IQCF5-AS1 Gene

Orthologs for IQCF5-AS1 Gene

Evolution for IQCF5-AS1 Gene

ENSEMBL:
Gene Tree for IQCF5-AS1 (if available)
TreeFam:
Gene Tree for IQCF5-AS1 (if available)

No data available for Orthologs for IQCF5-AS1 Gene

Paralogs for IQCF5-AS1 Gene

No data available for Paralogs for IQCF5-AS1 Gene

Variants for IQCF5-AS1 Gene

Sequence variations from dbSNP and Humsavar for IQCF5-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000464081 -- 51,871,738(+) C/T upstream_transcript_variant
rs1001210895 -- 51,873,303(+) T/C upstream_transcript_variant
rs1001304265 -- 51,873,210(+) C/A/T upstream_transcript_variant
rs1001311393 -- 51,872,208(+) G/T upstream_transcript_variant
rs1001358178 -- 51,872,946(+) G/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for IQCF5-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv3817 CNV insertion 18451855
nsv520211 CNV gain 19592680

Additional Variant Information for IQCF5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IQCF5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for IQCF5-AS1 Gene

Disorders for IQCF5-AS1 Gene

Additional Disease Information for IQCF5-AS1

No disorders were found for IQCF5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IQCF5-AS1 Gene

Publications for IQCF5-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for IQCF5-AS1 Gene

Sources for IQCF5-AS1 Gene

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