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Aliases for IQCF3 Gene

Aliases for IQCF3 Gene

  • IQ Motif Containing F3 2 3 5

External Ids for IQCF3 Gene

Previous GeneCards Identifiers for IQCF3 Gene

  • GC03P051826

Summaries for IQCF3 Gene

GeneCards Summary for IQCF3 Gene

IQCF3 (IQ Motif Containing F3) is a Protein Coding gene. An important paralog of this gene is IQCF5.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IQCF3 Gene

Genomics for IQCF3 Gene

Regulatory Elements for IQCF3 Gene

Enhancers for IQCF3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IQCF3 on UCSC Golden Path with GeneCards custom track

Genomic Location for IQCF3 Gene

Chromosome:
3
Start:
51,817,604 bp from pter
End:
51,830,858 bp from pter
Size:
13,255 bases
Orientation:
Plus strand

Genomic View for IQCF3 Gene

Genes around IQCF3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IQCF3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IQCF3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCF3 Gene

Proteins for IQCF3 Gene

  • Protein details for IQCF3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7M6-IQCF3_HUMAN
    Recommended name:
    IQ domain-containing protein F3
    Protein Accession:
    P0C7M6
    Secondary Accessions:
    • B2RUV0

    Protein attributes for IQCF3 Gene

    Size:
    154 amino acids
    Molecular mass:
    18251 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IQCF3 Gene

Proteomics data for IQCF3 Gene at MOPED

Post-translational modifications for IQCF3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IQCF3 Gene

No data available for DME Specific Peptides for IQCF3 Gene

Domains & Families for IQCF3 Gene

Protein Domains for IQCF3 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IQCF3 Gene

Graphical View of Domain Structure for InterPro Entry

P0C7M6

UniProtKB/Swiss-Prot:

IQCF3_HUMAN :
  • Contains 1 IQ domain.
Domain:
  • Contains 1 IQ domain.
genes like me logo Genes that share domains with IQCF3: view

No data available for Gene Families for IQCF3 Gene

Function for IQCF3 Gene

genes like me logo Genes that share phenotypes with IQCF3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IQCF3 Gene

Localization for IQCF3 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IQCF3 Gene COMPARTMENTS Subcellular localization image for IQCF3 gene
Compartment Confidence
cytosol 2
mitochondrion 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for IQCF3 Gene

Pathways & Interactions for IQCF3 Gene

SuperPathways for IQCF3 Gene

No Data Available

Interacting Proteins for IQCF3 Gene

Gene Ontology (GO) - Biological Process for IQCF3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IQCF3 Gene

Drugs & Compounds for IQCF3 Gene

No Compound Related Data Available

Transcripts for IQCF3 Gene

Unigene Clusters for IQCF3 Gene

IQ motif containing F3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IQCF3 Gene

No ASD Table

Relevant External Links for IQCF3 Gene

GeneLoc Exon Structure for
IQCF3
ECgene alternative splicing isoforms for
IQCF3

Expression for IQCF3 Gene

mRNA expression in normal human tissues for IQCF3 Gene

mRNA differential expression in normal tissues according to GTEx for IQCF3 Gene

This gene is overexpressed in Testis (x51.5).

Protein differential expression in normal tissues from HIPED for IQCF3 Gene

This gene is overexpressed in Thyroid (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for IQCF3 Gene



SOURCE GeneReport for Unigene cluster for IQCF3 Gene Hs.729443

genes like me logo Genes that share expression patterns with IQCF3: view

Protein tissue co-expression partners for IQCF3 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IQCF3 Gene

Orthologs for IQCF3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IQCF3 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia IQCF3 35
  • 74.89 (n)
  • 61.04 (a)
IQCF3 36
  • 53 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia IQCF3 35
  • 99.78 (n)
  • 100 (a)
IQCF3 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia IQCF3 36
  • 58 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 28 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Iqcf4 36
  • 24 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 26 (a)
OneToMany
Species with no ortholog for IQCF3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IQCF3 Gene

ENSEMBL:
Gene Tree for IQCF3 (if available)
TreeFam:
Gene Tree for IQCF3 (if available)

Paralogs for IQCF3 Gene

Paralogs for IQCF3 Gene

(4) SIMAP similar genes for IQCF3 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with IQCF3: view

Variants for IQCF3 Gene

Sequence variations from dbSNP and Humsavar for IQCF3 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs34004176 -- 51,828,256(+) TTTTC(-/C)AAGCG intron-variant
rs6782139 -- 51,825,814(+) ttcta(A/C)acata upstream-variant-2KB
rs60129654 -- 51,825,833(+) AAAAA(-/A)TTGAG upstream-variant-2KB
rs60756182 -- 51,825,422(+) CACAC(-/ACACACACAC)CACTA upstream-variant-2KB
rs60818362 -- 51,824,898(+) TATGT(G/T)AAAGT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for IQCF3 Gene

Variant ID Type Subtype PubMed ID
nsv520211 CNV Gain 19592680

Variation tolerance for IQCF3 Gene

Residual Variation Intolerance Score: 88.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.20; 4.50% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IQCF3 Gene

HapMap Linkage Disequilibrium report
IQCF3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IQCF3 Gene

Disorders for IQCF3 Gene

Relevant External Links for IQCF3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IQCF3

No disorders were found for IQCF3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IQCF3 Gene

Publications for IQCF3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for IQCF3 Gene

Sources for IQCF3 Gene

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