Aliases for IPO11-LRRC70 Gene
Subcategory (RNA class) for IPO11-LRRC70 Gene
ncRNA
Quality Score for this RNA gene is
1
Aliases for IPO11-LRRC70 Gene
- IPO11-LRRC70 Readthrough 3
External Ids for IPO11-LRRC70 Gene
- Entrez Gene: 101180901
Previous GeneCards Identifiers for IPO11-LRRC70 Gene
- GC05U901646
Summaries for IPO11-LRRC70 Gene
-
This locus represents naturally occurring readthrough transcription between the neighboring IPO11 (importin 11) and LRRC70 (leucine rich repeat containing 70) genes on chromosome 5. The readthrough transcript is represented as non-coding because it lacks a supported open reading frame. [provided by RefSeq, Jan 2013]
GeneCards Summary for IPO11-LRRC70 Gene
IPO11-LRRC70 (IPO11-LRRC70 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.
No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IPO11-LRRC70 Gene
Genomics for IPO11-LRRC70 Gene
Regulatory Elements for IPO11-LRRC70 Gene
Enhancers for IPO11-LRRC70 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH05F062576 | 0.9 | Ensembl ENCODE | 0.8 | +0.5 | 456 | 4.8 | RFX1 JUN ARID4B ZNF384 BMI1 GABPA NR2F2 RFX3 POLR2A | RPL35AP14 IPO11-LRRC70 LRRC70 PIR51933 |
| GH05F062584 | 1 | Ensembl ENCODE | 0.4 | +6.9 | 6864 | 1.5 | ESRRA JUN SMARCE1 RNF2 NR2F1 ELF1 DPF2 ZEB2 ARID1B JUND | DIMT1 IPO11-LRRC70 LRRC70 PIR51933 |
| GH05F062581 | 0.2 | Ensembl | 0.8 | +3.2 | 3166 | 0.2 | IPO11-LRRC70 LRRC70 PIR51933 | |
| GH05F062592 | 0.4 | ENCODE | 0.4 | +14.0 | 14014 | 0.2 | ZBTB33 CHAMP1 | IPO11-LRRC70 LRRC70 PIR51933 |
| GH05F062649 | 0.8 | Ensembl ENCODE | 0.2 | +71.5 | 71523 | 1.3 | GATA3 ATF3 GATA2 TEAD4 | IPO11-LRRC70 LRRC70 PIR51933 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track
Promoters for IPO11-LRRC70 Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|---|---|---|
| ENSR00001869668 | 65 | 401 | RFX1 ARID4B ZNF384 BMI1 NR2F2 RFX3 POLR2A ETV4 |
| ENSR00001281481 | 965 | 1000 |
Regulatory Element Products
Genomic Location for IPO11-LRRC70 Gene
- Chromosome:
- 5
- Start:
- 62,578,735 bp from pter
- End:
- 62,628,589 bp from pter
- Size:
- 49,855 bases
- Orientation:
- Plus strand
Genomic View for IPO11-LRRC70 Gene
Genes around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 5q12.1 by Entrez Gene
IPO11-LRRC70 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for IPO11-LRRC70 Gene
Proteins for IPO11-LRRC70 Gene
Post-translational modifications for IPO11-LRRC70 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for IPO11-LRRC70
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for IPO11-LRRC70
- Origene Custom Protein Services for IPO11-LRRC70
- Search GeneTex for Proteins for IPO11-LRRC70
Assay Products
No data available for DME Specific Peptides for IPO11-LRRC70 Gene
Domains & Families for IPO11-LRRC70 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IPO11-LRRC70 Gene
Function for IPO11-LRRC70 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for IPO11-LRRC70
-
- Search ViGene Biosciences for IPO11-LRRC70
CRISPR Products
- Browse CRISPR knockouts for IPO11-LRRC70
miRNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Inhibitory RNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Clone Products
- GenScript: Custom all cDNA clones Services for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for IPO11-LRRC70
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IPO11-LRRC70 Gene
Localization for IPO11-LRRC70 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IPO11-LRRC70 Gene
Transcripts for IPO11-LRRC70 Gene
CRISPR Products
- Browse CRISPR knockouts for IPO11-LRRC70
miRNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Inhibitory RNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Clone Products
- GenScript: Custom all cDNA clones Services for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Relevant External Links for IPO11-LRRC70 Gene
- GeneLoc Exon Structure for
- IPO11-LRRC70
No data available for mRNA/cDNA for IPO11-LRRC70 Gene
Expression for IPO11-LRRC70 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IPO11-LRRC70 Gene
Orthologs for IPO11-LRRC70 Gene
No data available for Orthologs and Evolution for IPO11-LRRC70 Gene
Paralogs for IPO11-LRRC70 Gene
No data available for Paralogs for IPO11-LRRC70 Gene
Variants for IPO11-LRRC70 Gene
| SNP ID | Clin | Chr 05 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs10051492 | -- | 62,614,059(+) | TTTTC(A/G)CATGT | intron-variant | |
| rs10054305 | -- | 62,603,321(+) | gttaa(A/G)tcaag | intron-variant | |
| rs10059269 | -- | 62,592,848(+) | ATTCA(A/G)TTACC | intron-variant | |
| rs10060044 | -- | 62,611,199(+) | TTAGA(A/G)ATACA | intron-variant | |
| rs10065349 | -- | 62,616,461(+) | AGGTA(C/T)GGTGG | intron-variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv5689n100 | CNV | gain | 25217958 |
| dgv5690n100 | CNV | gain | 25217958 |
| dgv941e201 | CNV | deletion | 23290073 |
| dgv942e201 | CNV | deletion | 23290073 |
| esv2005948 | CNV | deletion | 18987734 |
| esv2591326 | CNV | deletion | 19546169 |
| esv2763458 | CNV | gain | 21179565 |
| esv3575853 | CNV | gain | 25503493 |
| esv3605243 | CNV | loss | 21293372 |
| nsv1074301 | CNV | deletion | 25765185 |
| nsv328501 | CNV | deletion | 16902084 |
| nsv955846 | CNV | deletion | 24416366 |
| nsv598348 | CNV | gain | 21841781 |
| nsv4858 | CNV | deletion | 18451855 |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for IPO11-LRRC70 Gene
Disorders for IPO11-LRRC70 Gene
Relevant External Links for IPO11-LRRC70
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- IPO11-LRRC70
No disorders were found for IPO11-LRRC70 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IPO11-LRRC70 Gene
Publications for IPO11-LRRC70 Gene
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
Products for IPO11-LRRC70 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Search ViGene Biosciences for IPO11-LRRC70
- Cyagen custom Knockout/knockin (KOKI) mouse models for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for IPO11-LRRC70 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
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- (7) GeneLoc
- (8) Gene Wiki
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- (37) SGD
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- (40) Pseudogene
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- (45) HGMD
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- (50) eBioscience
- (51) Atlas
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- (62) NCBI
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- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
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- (78) MOPED
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