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Aliases for IPO11-LRRC70 Gene

Subcategory (RNA class) for IPO11-LRRC70 Gene


Quality Score for this RNA gene is


Aliases for IPO11-LRRC70 Gene

  • IPO11-LRRC70 Readthrough 3

External Ids for IPO11-LRRC70 Gene

Previous GeneCards Identifiers for IPO11-LRRC70 Gene

  • GC05U901646

Summaries for IPO11-LRRC70 Gene

Entrez Gene Summary for IPO11-LRRC70 Gene

  • This locus represents naturally occurring readthrough transcription between the neighboring IPO11 (importin 11) and LRRC70 (leucine rich repeat containing 70) genes on chromosome 5. The readthrough transcript is represented as non-coding because it lacks a supported open reading frame. [provided by RefSeq, Jan 2013]

GeneCards Summary for IPO11-LRRC70 Gene

IPO11-LRRC70 (IPO11-LRRC70 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IPO11-LRRC70 Gene

Genomics for IPO11-LRRC70 Gene

Regulatory Elements for IPO11-LRRC70 Gene

Enhancers for IPO11-LRRC70 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F062576 1.1 Ensembl ENCODE 0.8 +0.5 456 4.8 RFX1 JUN ARID4B ZNF384 BMI1 GABPA NR2F2 RFX3 POLR2A RPL35AP14 IPO11-LRRC70 LRRC70 PIR51933
GH05F062581 0.8 Ensembl 0.8 +3.2 3166 0.2 IPO11-LRRC70 LRRC70 PIR51933
GH05F062584 1.2 Ensembl ENCODE 0.4 +6.9 6864 1.5 ESRRA JUN SMARCE1 RNF2 NR2F1 ELF1 DPF2 ZEB2 ARID1B JUND DIMT1 IPO11-LRRC70 LRRC70 PIR51933
GH05F062592 0.4 ENCODE 0.4 +14.0 14014 0.2 ZBTB33 CHAMP1 LRRC70 IPO11-LRRC70 PIR51933
GH05F062620 0.5 ENCODE 0.2 +42.6 42559 0.6 SCRT2 ZEB2 LRRC70 IPO11-LRRC70 PIR51933
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track

Promoters for IPO11-LRRC70 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001869668 65 401 RFX1 ARID4B ZNF384 BMI1 NR2F2 RFX3 POLR2A ETV4
ENSR00001281481 965 1000

Genomic Location for IPO11-LRRC70 Gene

62,578,735 bp from pter
62,628,589 bp from pter
49,855 bases
Plus strand

Genomic View for IPO11-LRRC70 Gene

Genes around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IPO11-LRRC70 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IPO11-LRRC70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IPO11-LRRC70 Gene

Proteins for IPO11-LRRC70 Gene

Post-translational modifications for IPO11-LRRC70 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IPO11-LRRC70 Gene

Domains & Families for IPO11-LRRC70 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IPO11-LRRC70 Gene

Function for IPO11-LRRC70 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IPO11-LRRC70 Gene

Localization for IPO11-LRRC70 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IPO11-LRRC70 Gene

Pathways & Interactions for IPO11-LRRC70 Gene

SuperPathways for IPO11-LRRC70 Gene

No Data Available

Interacting Proteins for IPO11-LRRC70 Gene

Gene Ontology (GO) - Biological Process for IPO11-LRRC70 Gene


No data available for Pathways by source and SIGNOR curated interactions for IPO11-LRRC70 Gene

Transcripts for IPO11-LRRC70 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for IPO11-LRRC70 Gene

No ASD Table

Relevant External Links for IPO11-LRRC70 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for IPO11-LRRC70 Gene

Expression for IPO11-LRRC70 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IPO11-LRRC70 Gene

Orthologs for IPO11-LRRC70 Gene

No data available for Orthologs and Evolution for IPO11-LRRC70 Gene

Paralogs for IPO11-LRRC70 Gene

No data available for Paralogs for IPO11-LRRC70 Gene

Variants for IPO11-LRRC70 Gene

Sequence variations from dbSNP and Humsavar for IPO11-LRRC70 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs10051492 -- 62,614,059(+) TTTTC(A/G)CATGT intron-variant
rs10054305 -- 62,603,321(+) gttaa(A/G)tcaag intron-variant
rs10059269 -- 62,592,848(+) ATTCA(A/G)TTACC intron-variant
rs10060044 -- 62,611,199(+) TTAGA(A/G)ATACA intron-variant
rs10065349 -- 62,616,461(+) AGGTA(C/T)GGTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IPO11-LRRC70 Gene

Variant ID Type Subtype PubMed ID
dgv5689n100 CNV gain 25217958
dgv5690n100 CNV gain 25217958
dgv941e201 CNV deletion 23290073
dgv942e201 CNV deletion 23290073
esv2005948 CNV deletion 18987734
esv2591326 CNV deletion 19546169
esv2763458 CNV gain 21179565
esv3575853 CNV gain 25503493
esv3605243 CNV loss 21293372
nsv1074301 CNV deletion 25765185
nsv328501 CNV deletion 16902084
nsv4858 CNV deletion 18451855
nsv598348 CNV gain 21841781
nsv955846 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for IPO11-LRRC70 Gene

Disorders for IPO11-LRRC70 Gene

Relevant External Links for IPO11-LRRC70

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for IPO11-LRRC70 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IPO11-LRRC70 Gene

Publications for IPO11-LRRC70 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for IPO11-LRRC70 Gene

Sources for IPO11-LRRC70 Gene

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