Aliases for IPO11-LRRC70 Gene
Subcategory (RNA class) for IPO11-LRRC70 Gene
ncRNA
Quality Score for this RNA gene is
1
Aliases for IPO11-LRRC70 Gene
- IPO11-LRRC70 Readthrough 3
External Ids for IPO11-LRRC70 Gene
- Entrez Gene: 101180901
Previous GeneCards Identifiers for IPO11-LRRC70 Gene
- GC05U901646
Summaries for IPO11-LRRC70 Gene
-
This locus represents naturally occurring readthrough transcription between the neighboring IPO11 (importin 11) and LRRC70 (leucine rich repeat containing 70) genes on chromosome 5. The readthrough transcript is represented as non-coding because it lacks a supported open reading frame. [provided by RefSeq, Jan 2013]
GeneCards Summary for IPO11-LRRC70 Gene
IPO11-LRRC70 (IPO11-LRRC70 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for IPO11-LRRC70 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IPO11-LRRC70 Gene
Genomics for IPO11-LRRC70 Gene
GeneHancer (GH) Regulatory Elements for IPO11-LRRC70 Gene
Promoters and enhancers for IPO11-LRRC70 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH05I062576 | Promoter/Enhancer | 1.5 | EPDnew Ensembl ENCODE dbSUPER | 550.8 | +0.3 | 319 | 4.5 | RFX1 JUN ETV1 ARID4B ZNF384 ELF1 BMI1 NR2F2 GABPA RFX3 | IPO11-LRRC70 LRRC70 RPL35AP14 IPO11 PIR51933 | |
| GH05I062584 | Enhancer | 0.9 | ENCODE dbSUPER | 0.4 | +6.9 | 6864 | 1.5 | SMARCE1 HDAC1 TEAD4 JUN DPF2 ELF1 ZEB2 EP300 ZNF592 FOSL1 | DIMT1 IPO11-LRRC70 LRRC70 IPO11 PIR51933 | |
| GH05I062598 | Enhancer | 0.7 | dbSUPER | 0.3 | +22.2 | 22157 | 4.4 | SOX13 TFAP4 FOXA2 ZNF644 THRB RARA GATA3 NR2F6 FOS HOMEZ | DIMT1 RPL35AP14 IPO11-LRRC70 LRRC70 PIR51933 IPO11 | |
| GH05I062620 | Enhancer | 0.7 | ENCODE dbSUPER | 0.3 | +42.6 | 42558 | 0.6 | EGR1 SCRT2 ZEB2 PRDM10 | IPO11-LRRC70 LRRC70 PIR51933 IPO11 | |
| GH05I062592 | Enhancer | 0.5 | ENCODE | 0.4 | +14.0 | 14014 | 0.2 | CC2D1A AFF1 ZBTB33 CHAMP1 | IPO11-LRRC70 LRRC70 PIR51933 IPO11 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for IPO11-LRRC70 Gene
Genomic Locations for IPO11-LRRC70 Gene
- chr5:62,578,735-62,628,589
- (GRCh38/hg38)
- Size:
- 49,855 bases
- Orientation:
- Plus strand
Genomic View for IPO11-LRRC70 Gene
Genes around IPO11-LRRC70 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 5q12.1 by Entrez Gene
IPO11-LRRC70 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for IPO11-LRRC70 Gene
Proteins for IPO11-LRRC70 Gene
Post-translational modifications for IPO11-LRRC70 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for IPO11-LRRC70
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for IPO11-LRRC70
- Origene Custom Protein Services for IPO11-LRRC70
- Search GeneTex for Proteins for IPO11-LRRC70
No data available for DME Specific Peptides for IPO11-LRRC70 Gene
Domains & Families for IPO11-LRRC70 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IPO11-LRRC70 Gene
Function for IPO11-LRRC70 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for IPO11-LRRC70
-
- Search ViGene Biosciences for IPO11-LRRC70
CRISPR Products
- Browse CRISPR knockouts for IPO11-LRRC70
miRNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Inhibitory RNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Clone Products
- GenScript: Custom all cDNA clones Services for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IPO11-LRRC70 Gene
Localization for IPO11-LRRC70 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IPO11-LRRC70 Gene
Transcripts for IPO11-LRRC70 Gene
CRISPR Products
- Browse CRISPR knockouts for IPO11-LRRC70
miRNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Inhibitory RNA Products
- Search ViGene Biosciences for IPO11-LRRC70
Clone Products
- GenScript: Custom all cDNA clones Services for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for IPO11-LRRC70 Gene
- GeneLoc Exon Structure for
- IPO11-LRRC70
No data available for mRNA/cDNA for IPO11-LRRC70 Gene
Expression for IPO11-LRRC70 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IPO11-LRRC70 Gene
Orthologs for IPO11-LRRC70 Gene
No data available for Orthologs and Evolution for IPO11-LRRC70 Gene
Paralogs for IPO11-LRRC70 Gene
No data available for Paralogs for IPO11-LRRC70 Gene
Variants for IPO11-LRRC70 Gene
| SNP ID | Clin | Chr 05 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000008643 | -- | 62,615,737(+) | G/A/C | intron_variant | |
| rs1000054572 | -- | 62,611,635(+) | A/G | intron_variant | |
| rs1000089674 | -- | 62,600,040(+) | T/C | intron_variant | |
| rs1000107721 | -- | 62,606,893(+) | C/T | intron_variant | |
| rs1000112908 | -- | 62,590,814(+) | C/T | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv5689n100 | CNV | gain | 25217958 |
| dgv5690n100 | CNV | gain | 25217958 |
| dgv941e201 | CNV | deletion | 23290073 |
| dgv942e201 | CNV | deletion | 23290073 |
| esv2005948 | CNV | deletion | 18987734 |
| esv2591326 | CNV | deletion | 19546169 |
| esv2763458 | CNV | gain | 21179565 |
| esv3575853 | CNV | gain | 25503493 |
| esv3605243 | CNV | loss | 21293372 |
| nsv1074301 | CNV | deletion | 25765185 |
| nsv328501 | CNV | deletion | 16902084 |
| nsv4858 | CNV | deletion | 18451855 |
| nsv598348 | CNV | gain | 21841781 |
| nsv955846 | CNV | deletion | 24416366 |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for IPO11-LRRC70 Gene
Disorders for IPO11-LRRC70 Gene
Additional Disease Information for IPO11-LRRC70
No disorders were found for IPO11-LRRC70 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IPO11-LRRC70 Gene
Publications for IPO11-LRRC70 Gene
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
Products for IPO11-LRRC70 Gene
- Browse R&D Systems for Antibodies
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- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Cloud-Clone Corp. disease models service
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for IPO11-LRRC70
- VectorBuilder custom plasmid, inducible vectors for IPO11-LRRC70
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for IPO11-LRRC70
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for IPO11-LRRC70
- Search GeneTex for Proteins for IPO11-LRRC70
Sources for IPO11-LRRC70 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
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- (28) ASD
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- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
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- (36) SGD
- (37) FlyBase
- (38) WormBase
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- (42) GenAtlas
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- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
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- (60) TGDB
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- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
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- (84) Vector BioLabs
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- (98) CYP
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