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Aliases for INTS6L-AS1 Gene

Subcategory (RNA class) for INTS6L-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for INTS6L-AS1 Gene

  • INTS6L Antisense RNA 1 2 3 5
  • DDX26B Antisense RNA 1 (Non-Protein Coding) 2 3
  • DDX26B Antisense RNA 1 2
  • DDX26B-AS1 3

External Ids for INTS6L-AS1 Gene

Previous HGNC Symbols for INTS6L-AS1 Gene

  • DDX26B-AS1

Summaries for INTS6L-AS1 Gene

GeneCards Summary for INTS6L-AS1 Gene

INTS6L-AS1 (INTS6L Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for INTS6L-AS1 Gene

Genomics for INTS6L-AS1 Gene

Regulatory Elements for INTS6L-AS1 Gene

Enhancers for INTS6L-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF135519 1.1 ENCODE 0.8 -1.3 -1333 5.0 ATF1 PKNOX1 WRNIP1 YY1 GLIS2 ELK1 GATA2 ZNF143 KDM4B ZNF263 INTS6L INTS6L-AS1 PIR34853
GH0XF135536 0.9 Ensembl ENCODE 0.3 -16.2 -16234 1.0 SIN3A MAFG DPF2 RAD21 ZNF316 GATA3 JUND NFE2 FOS EMSY INTS6L INTS6L-AS1 PIR34853
GH0XF135544 0.8 Ensembl ENCODE 0.3 -23.7 -23727 0.8 CTCF ESRRA ZNF341 ZNF580 ZEB2 RAD21 INTS6L INTS6L-AS1 PIR34853
GH0XF135537 0.6 Ensembl 0.3 -15.4 -15427 0.2 JUND POLR2A SIN3A FOS RAD21 INTS6L-AS1 PIR34853
GH0XF135527 0.4 ENCODE 0.4 -7.5 -7508 0.9 IKZF1 HMBOX1 INTS6L INTS6L-AS1 PIR34853
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around INTS6L-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for INTS6L-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001491767 -926 3600 ATF1 PKNOX1 WRNIP1 GLIS2 GATA2 ZNF143 KDM4B ZNF263 SP3 GTF2B

Genomic Location for INTS6L-AS1 Gene

135,520,083 bp from pter
135,520,674 bp from pter
592 bases
Minus strand

Genomic View for INTS6L-AS1 Gene

Genes around INTS6L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
INTS6L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INTS6L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INTS6L-AS1 Gene

Proteins for INTS6L-AS1 Gene

Post-translational modifications for INTS6L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INTS6L-AS1 Gene

Domains & Families for INTS6L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for INTS6L-AS1 Gene

Function for INTS6L-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INTS6L-AS1 Gene

Localization for INTS6L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for INTS6L-AS1 Gene

Pathways & Interactions for INTS6L-AS1 Gene

SuperPathways for INTS6L-AS1 Gene

No Data Available

Interacting Proteins for INTS6L-AS1 Gene

Gene Ontology (GO) - Biological Process for INTS6L-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for INTS6L-AS1 Gene

Transcripts for INTS6L-AS1 Gene

mRNA/cDNA for INTS6L-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for INTS6L-AS1 Gene

No ASD Table

Relevant External Links for INTS6L-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for INTS6L-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for INTS6L-AS1 Gene

Orthologs for INTS6L-AS1 Gene

Evolution for INTS6L-AS1 Gene

Gene Tree for INTS6L-AS1 (if available)
Gene Tree for INTS6L-AS1 (if available)

No data available for Orthologs for INTS6L-AS1 Gene

Paralogs for INTS6L-AS1 Gene

No data available for Paralogs for INTS6L-AS1 Gene

Variants for INTS6L-AS1 Gene

Sequence variations from dbSNP and Humsavar for INTS6L-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111743980 -- 135,519,832(+) AGGAG(C/T)TGGAC downstream-variant-500B, upstream-variant-2KB
rs138871583 -- 135,521,071(+) TGGAC(A/G)TTGCC nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs140906235 -- 135,521,501(+) TGGGG(G/T)CGGGG intron-variant, upstream-variant-2KB
rs141887339 -- 135,522,422(+) TATGG(C/T)GAGGA intron-variant, upstream-variant-2KB
rs147548926 -- 135,521,085(+) GGCGC(C/T)GTGGA nc-transcript-variant, upstream-variant-2KB, reference, synonymous-codon, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for INTS6L-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2758895 CNV gain+loss 17122850
nsv522205 CNV gain 19592680

Relevant External Links for INTS6L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for INTS6L-AS1 Gene

Disorders for INTS6L-AS1 Gene

Relevant External Links for INTS6L-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for INTS6L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for INTS6L-AS1 Gene

Publications for INTS6L-AS1 Gene

No publications were found for INTS6L-AS1 Gene.

Products for INTS6L-AS1 Gene

Sources for INTS6L-AS1 Gene

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