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Aliases for INTS4P1 Gene

Aliases for INTS4P1 Gene

  • Integrator Complex Subunit 4 Pseudogene 1 2 3 5
  • Integrator Complex Subunit 4-Like 1 2 3
  • INTS4L1 3

External Ids for INTS4P1 Gene

Previous HGNC Symbols for INTS4P1 Gene

  • INTS4L1

Summaries for INTS4P1 Gene

GeneCards Summary for INTS4P1 Gene

INTS4P1 (Integrator Complex Subunit 4 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for INTS4P1 Gene

Genomics for INTS4P1 Gene

Regulatory Elements for INTS4P1 Gene

Enhancers for INTS4P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F064995 1.4 Ensembl ENCODE 33.8 -139.3 -139309 11.8 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 GTF2IP14 CCT6P3 ERV3-1 INTS4P1 ZNF117 VKORC1L1 ENSG00000227113 CCT6P1 EEF1DP4 ZNF680
GH07F065079 1.2 Ensembl ENCODE 35.4 -60.2 -60167 2.5 HDGF PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF48 BRCA1 ZNF2 YY1 GTF2IP14 INTS4P1 CCT6P3 ZNF117 ZNF273 ERV3-1 ENSG00000227113
GH07F065034 0.9 Ensembl ENCODE 32.6 -106.5 -106500 0.6 NR2F1 PPARG RARA ZNF316 ATF3 IKZF1 ZBTB33 BCL6 TRIM24 MAFK INTS4P1 CCT6P3 LOC105375330 LOC105375329
GH07F065037 0.9 ENCODE 31.8 -102.1 -102074 2.9 TBP NFRKB KLF17 SIN3A YY1 CREM SMAD5 POLR2H MBD2 KLF16 GTF2IP14 CCT6P3 INTS4P1 VKORC1L1 ZNF117 ENSG00000239985 GC07P065066
GH07F065035 0.6 ENCODE 32.5 -104.9 -104913 1.8 ZNF146 ATF3 IKZF1 ZMYM3 SPI1 GTF2IP14 INTS4P1 VKORC1L1 ZNF117 LOC105375330 LOC105375329
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around INTS4P1 on UCSC Golden Path with GeneCards custom track

Promoters for INTS4P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001892382 -292 1000 BCOR MAZ ZNF24 ZSCAN29 ZBTB20

Genomic Location for INTS4P1 Gene

Chromosome:
7
Start:
65,141,193 bp from pter
End:
65,234,216 bp from pter
Size:
93,024 bases
Orientation:
Plus strand

Genomic View for INTS4P1 Gene

Genes around INTS4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
INTS4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INTS4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INTS4P1 Gene

Proteins for INTS4P1 Gene

Post-translational modifications for INTS4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INTS4P1 Gene

Domains & Families for INTS4P1 Gene

Suggested Antigen Peptide Sequences for INTS4P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for INTS4P1 Gene

Function for INTS4P1 Gene

Phenotypes for INTS4P1 Gene

genes like me logo Genes that share phenotypes with INTS4P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INTS4P1 Gene

Localization for INTS4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for INTS4P1 Gene

Pathways & Interactions for INTS4P1 Gene

SuperPathways for INTS4P1 Gene

No Data Available

Interacting Proteins for INTS4P1 Gene

Gene Ontology (GO) - Biological Process for INTS4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for INTS4P1 Gene

Transcripts for INTS4P1 Gene

mRNA/cDNA for INTS4P1 Gene

(1) REFSEQ mRNAs :
(10) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for INTS4P1 Gene

No ASD Table

Relevant External Links for INTS4P1 Gene

GeneLoc Exon Structure for
INTS4P1
ECgene alternative splicing isoforms for
INTS4P1

Expression for INTS4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for INTS4P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of INTS4P1 Gene:

INTS4P1
genes like me logo Genes that share expression patterns with INTS4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for INTS4P1 Gene

Orthologs for INTS4P1 Gene

Evolution for INTS4P1 Gene

ENSEMBL:
Gene Tree for INTS4P1 (if available)
TreeFam:
Gene Tree for INTS4P1 (if available)

No data available for Orthologs for INTS4P1 Gene

Paralogs for INTS4P1 Gene

No data available for Paralogs for INTS4P1 Gene

Variants for INTS4P1 Gene

Sequence variations from dbSNP and Humsavar for INTS4P1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10232360 -- 65,144,650(+) aatga(G/T)gaaat intron-variant
rs10235565 -- 65,144,789(+) atcat(G/T)agatg intron-variant
rs10244115 -- 65,153,162(+) TATGT(A/G)TGAAT intron-variant
rs10245985 -- 65,144,922(+) tgatg(A/G)aatga intron-variant
rs10256114 -- 65,185,902(+) CTCCC(A/G)GATTC intron-variant

Relevant External Links for INTS4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INTS4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for INTS4P1 Gene

Disorders for INTS4P1 Gene

Relevant External Links for INTS4P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
INTS4P1

No disorders were found for INTS4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for INTS4P1 Gene

Publications for INTS4P1 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for INTS4P1 Gene

Sources for INTS4P1 Gene

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