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Aliases for IL36RN Gene

Aliases for IL36RN Gene

  • Interleukin 36 Receptor Antagonist 2 3 5
  • Interleukin-1 Receptor Antagonist Homolog 1 2 3 4
  • Interleukin-1 HY1 2 3 4
  • Interleukin 1 Family, Member 5 (Delta) 2 3
  • Interleukin-1-Like Protein 1 3 4
  • IL-1 Related Protein 3 2 3
  • IL-1ra Homolog 1 3 4
  • IL-36Ra 3 4
  • IL1HY1 3 4
  • IL1RP3 3 4
  • IL1F5 3 4
  • FIL1D 3 4
  • IL1L1 3 4
  • IL-1F5 (IL-1HY1, FIL1-Delta, IL-1RP3, IL-1L1, IL-1-Delta) 3
  • Interleukin-36 Receptor Antagonist Protein 3
  • IL1F5 (Canonical Product IL-1F5a) 3
  • Family Of Interleukin 1-Delta 2
  • Interleukin-1 Family Member 5 4
  • IL-1-Related Protein 3 4
  • Interleukin-1 Delta 4
  • FIL1(DELTA) 3
  • FIL1 Delta 4
  • IL-1 Delta 4
  • PSORS14 3
  • IL-1HY1 4
  • IL-1RP3 4
  • IL36RA 3
  • IL-1F5 4
  • IL-1L1 4
  • PSORP 3
  • FIL1 3

External Ids for IL36RN Gene

Previous HGNC Symbols for IL36RN Gene

  • IL1F5

Previous GeneCards Identifiers for IL36RN Gene

  • GC02P113817
  • GC02P113059

Summaries for IL36RN Gene

Entrez Gene Summary for IL36RN Gene

  • The protein encoded by this gene is a member of the interleukin 1 cytokine family. This cytokine was shown to specifically inhibit the activation of NF-kappaB induced by interleukin 1 family, member 6 (IL1F6). This gene and eight other interleukin 1 family genes form a cytokine gene cluster on chromosome 2. Two alternatively spliced transcript variants encoding the same protein have been reported. [provided by RefSeq, Jul 2008]

GeneCards Summary for IL36RN Gene

IL36RN (Interleukin 36 Receptor Antagonist) is a Protein Coding gene. Diseases associated with IL36RN include Psoriasis 14, Pustular and Pustulosis Palmaris Et Plantaris. Among its related pathways are Toll-Like receptor Signaling Pathways. GO annotations related to this gene include cytokine activity and interleukin-1 receptor antagonist activity. An important paralog of this gene is IL1RN.

UniProtKB/Swiss-Prot for IL36RN Gene

  • Inhibits the activity of interleukin-36 (IL36A,IL36B and IL36G) by binding to receptor IL1RL2 and preventing its association with the coreceptor IL1RAP for signaling. Part of the IL-36 signaling system that is thought to be present in epithelial barriers and to take part in local inflammatory response; similar to the IL-1 system with which it shares the coreceptor. Proposed to play a role in skin inflammation. May be involved in the innate immune response to fungal pathogens, such as Aspergillus fumigatus. May activate an anti-inflammatory signaling pathway by recruiting SIGIRR.

Gene Wiki entry for IL36RN Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL36RN Gene

Genomics for IL36RN Gene

Regulatory Elements for IL36RN Gene

Enhancers for IL36RN Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G113076 1.8 FANTOM5 Ensembl ENCODE dbSUPER 20.5 +20.2 20164 3.7 NFIB RAD21 YY1 ZNF143 FOS RCOR1 EGR2 ZNF654 ZHX2 REST IL1RN IL36B IL1B IL36A IL36RN PSD4 IL36G IL37 PAX8-AS1 IL1A
GH02G113071 1 ENCODE dbSUPER 10.7 +14.0 13985 2.2 CTCF ATF1 CREB3L1 BACH1 ZMYM3 CEBPG ZNF316 FOS NFE2 MAFK IL36B IL1RN PSD4 IL36RN IL36A IL37 NDUFB4P6 CDK8P2 IL1F10 GC02P113088
GH02G113126 1.6 Ensembl ENCODE dbSUPER 6.1 +70.6 70615 5.1 HDGF PKNOX1 FOXA2 MLX ARID4B DMAP1 YY1 SLC30A9 ZNF143 FOS PSD4 PAX8-AS1 RNU6-1180P PAX8 IL1F10 IL36RN LINC01191 GC02P113123 GC02P113124
GH02G113155 1.5 FANTOM5 ENCODE dbSUPER 5 +99.1 99143 3.7 FOXA2 MLX ARID4B ZNF48 YY1 GLIS2 FOS NFYC REST PPARG IL1RN PAX8-AS1 RNU6-1180P IL36RN IL36B IL1B IL36G PSD4 ENSG00000234174
GH02G113132 1 dbSUPER 6.4 +74.4 74445 1.0 HDGF ATF1 AGO1 ARID4B SIN3A GLI4 ZNF48 YY1 TCF12 SLC30A9 PAX8-AS1 RNU6-1180P PSD4 IL1RN IL36RN GC02P113123 GC02P113124
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IL36RN on UCSC Golden Path with GeneCards custom track

Genomic Location for IL36RN Gene

Chromosome:
2
Start:
113,058,638 bp from pter
End:
113,065,382 bp from pter
Size:
6,745 bases
Orientation:
Plus strand

Genomic View for IL36RN Gene

Genes around IL36RN on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL36RN Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL36RN Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL36RN Gene

Proteins for IL36RN Gene

  • Protein details for IL36RN Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UBH0-I36RA_HUMAN
    Recommended name:
    Interleukin-36 receptor antagonist protein
    Protein Accession:
    Q9UBH0
    Secondary Accessions:
    • A8K2I4
    • Q56AT9
    • Q7RTZ6

    Protein attributes for IL36RN Gene

    Size:
    155 amino acids
    Molecular mass:
    16962 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for IL36RN Gene

neXtProt entry for IL36RN Gene

Post-translational modifications for IL36RN Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IL36RN Gene

Antibody Products

  • R&D Systems Antibodies for IL36RN (IL-36Ra/IL-1F5)
  • Abcam antibodies for IL36RN
  • Santa Cruz Biotechnology (SCBT) Antibodies for IL36RN

No data available for DME Specific Peptides for IL36RN Gene

Domains & Families for IL36RN Gene

Gene Families for IL36RN Gene

Suggested Antigen Peptide Sequences for IL36RN Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UBH0

UniProtKB/Swiss-Prot:

I36RA_HUMAN :
  • Belongs to the IL-1 family.
Family:
  • Belongs to the IL-1 family.
genes like me logo Genes that share domains with IL36RN: view

Function for IL36RN Gene

Molecular function for IL36RN Gene

UniProtKB/Swiss-Prot Function:
Inhibits the activity of interleukin-36 (IL36A,IL36B and IL36G) by binding to receptor IL1RL2 and preventing its association with the coreceptor IL1RAP for signaling. Part of the IL-36 signaling system that is thought to be present in epithelial barriers and to take part in local inflammatory response; similar to the IL-1 system with which it shares the coreceptor. Proposed to play a role in skin inflammation. May be involved in the innate immune response to fungal pathogens, such as Aspergillus fumigatus. May activate an anti-inflammatory signaling pathway by recruiting SIGIRR.
UniProtKB/Swiss-Prot Induction:
By phorbol ester (PMA) and bacterial lipopolysaccharides (LPS) treatment in macrophage cell line. By Aspergillus fumigatus conidia in peripheral blood mnonocytes.

Gene Ontology (GO) - Molecular Function for IL36RN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005125 cytokine activity IEA,IBA --
GO:0005149 interleukin-1 receptor binding IEA,IBA --
GO:0005152 interleukin-1 receptor antagonist activity IEA --
GO:0005515 protein binding IPI 16189514
genes like me logo Genes that share ontologies with IL36RN: view
genes like me logo Genes that share phenotypes with IL36RN: view

Human Phenotype Ontology for IL36RN Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Models for IL36RN Gene

MGI Knock Outs for IL36RN:

Animal Model Products

  • Taconic Biosciences Mouse Models for IL36RN

CRISPR Products

miRNA for IL36RN Gene

miRTarBase miRNAs that target IL36RN

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for IL36RN Gene

Localization for IL36RN Gene

Subcellular locations from UniProtKB/Swiss-Prot for IL36RN Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL36RN gene
Compartment Confidence
extracellular 5
mitochondrion 1
nucleus 1
cytosol 1

Gene Ontology (GO) - Cellular Components for IL36RN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA,TAS --
GO:0005615 extracellular space IEA,IBA --
genes like me logo Genes that share ontologies with IL36RN: view

Pathways & Interactions for IL36RN Gene

genes like me logo Genes that share pathways with IL36RN: view

Pathways by source for IL36RN Gene

1 R&D Systems pathway for IL36RN Gene

Gene Ontology (GO) - Biological Process for IL36RN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001960 negative regulation of cytokine-mediated signaling pathway IMP 23147407
GO:0002376 immune system process IEA --
GO:0006954 inflammatory response IEA --
GO:0006955 immune response IEA --
GO:0019732 antifungal humoral response IMP 23147407
genes like me logo Genes that share ontologies with IL36RN: view

No data available for SIGNOR curated interactions for IL36RN Gene

Transcripts for IL36RN Gene

Unigene Clusters for IL36RN Gene

Interleukin 36 receptor antagonist:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IL36RN Gene

No ASD Table

Relevant External Links for IL36RN Gene

GeneLoc Exon Structure for
IL36RN
ECgene alternative splicing isoforms for
IL36RN

Expression for IL36RN Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL36RN Gene

mRNA differential expression in normal tissues according to GTEx for IL36RN Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x23.1), Skin - Not Sun Exposed (Suprapubic) (x13.9), and Esophagus - Mucosa (x10.3).

Protein differential expression in normal tissues from HIPED for IL36RN Gene

This gene is overexpressed in Cervix (62.2) and Oral epithelium (6.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for IL36RN Gene



Protein tissue co-expression partners for IL36RN Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of IL36RN Gene:

IL36RN

SOURCE GeneReport for Unigene cluster for IL36RN Gene:

Hs.516301

mRNA Expression by UniProt/SwissProt for IL36RN Gene:

Q9UBH0-I36RA_HUMAN
Tissue specificity: Predominantly expressed in skin keratinocytes but not in fibroblasts, endothelial cells or melanocytes. Detected also in the spleen, brain leukocyte and macrophage cell types. Increased in lesional psoriasis skin.

Evidence on tissue expression from TISSUES for IL36RN Gene

  • Skin(4.6)

Phenotype-based relationships between genes and organs from Gene ORGANizer for IL36RN Gene

Germ Layers:
  • ectoderm
  • mesoderm
Systems:
  • cardiovascular
  • immune
  • integumentary
  • nervous
Organs:
Head and neck:
  • brain
  • head
Limb:
  • digit
  • finger
  • foot
  • hand
  • lower limb
  • nail
  • toe
  • upper limb
General:
  • blood
  • hair
  • skin
  • sweat gland
  • white blood cell
genes like me logo Genes that share expression patterns with IL36RN: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for IL36RN Gene

Orthologs for IL36RN Gene

This gene was present in the common ancestor of mammals.

Orthologs for IL36RN Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IL1F5 34
  • 99.35 (n)
IL36RN 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia IL36RN 34 35
  • 89.03 (n)
mouse
(Mus musculus)
Mammalia Il1f5 34 16 35
  • 84.3 (n)
cow
(Bos Taurus)
Mammalia IL36RN 34 35
  • 83.66 (n)
rat
(Rattus norvegicus)
Mammalia Il36rn 34
  • 82.58 (n)
oppossum
(Monodelphis domestica)
Mammalia IL36RN 35
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia IL36RN 35
  • 37 (a)
OneToOne
Species where no ortholog for IL36RN was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IL36RN Gene

ENSEMBL:
Gene Tree for IL36RN (if available)
TreeFam:
Gene Tree for IL36RN (if available)

Paralogs for IL36RN Gene

Paralogs for IL36RN Gene

(4) SIMAP similar genes for IL36RN Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with IL36RN: view

Variants for IL36RN Gene

Sequence variations from dbSNP and Humsavar for IL36RN Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs144478519 Pathogenic, Psoriasis 14, pustular (PSORS14) [MIM:614204] 113,062,547(+) CGAGT(A/C/T)GGCTG reference, missense
rs151325121 Pathogenic, Psoriasis 14, pustular (PSORS14) [MIM:614204] 113,062,150(+) CCAAT(C/T)GGTGG reference, missense
rs387906914 Pathogenic, Psoriasis 14, pustular (PSORS14) [MIM:614204] 113,060,902(+) GCTTC(C/T)AGCTG reference, missense
rs397514629 Pathogenic, Psoriasis 14, pustular (PSORS14) [MIM:614204] 113,062,577(+) GTGCA(C/G/T)GGTGC reference, missense
rs148755083 Pathogenic 113,060,943(+) GTTGG(C/T)GATGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IL36RN Gene

Variant ID Type Subtype PubMed ID
nsv1136395 CNV deletion 24896259
nsv2881 CNV deletion 18451855

Variation tolerance for IL36RN Gene

Residual Variation Intolerance Score: 84.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.75; 46.95% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IL36RN Gene

Human Gene Mutation Database (HGMD)
IL36RN
SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL36RN

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IL36RN Gene

Disorders for IL36RN Gene

MalaCards: The human disease database

(20) MalaCards diseases for IL36RN Gene - From: OMIM, ClinVar, GeneTests, Orphanet, Swiss-Prot, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
psoriasis 14, pustular
  • palmoplantar pustulosis
pustulosis palmaris et plantaris
  • localized pustular psoriasis
acrodermatitis continua suppurativa of hallopeau
impetigo herpetiformis
geographic tongue
  • benign migratory glossitis
- elite association - COSMIC cancer census association via MalaCards

UniProtKB/Swiss-Prot

I36RA_HUMAN
  • Psoriasis 14, pustular (PSORS14) [MIM:614204]: A life-threatening disease defined by repeated flares of sudden onset consisting of diffuse erythematous skin eruption characterized by rapid coverage with pustules, high-grade fever, asthenia, marked leukocytosis, and elevated serum levels of C-reactive protein. {ECO:0000269 PubMed:21839423, ECO:0000269 PubMed:21848462, ECO:0000269 PubMed:22903787}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Relevant External Links for IL36RN

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL36RN
genes like me logo Genes that share disorders with IL36RN: view

No data available for Genatlas for IL36RN Gene

Publications for IL36RN Gene

  1. Four new members expand the IL-1 superfamily. (PMID: 10625660) Smith D.E. … Sims J.E. (J. Biol. Chem. 2000) 2 3 4 22 64
  2. IL1HY1: a novel interleukin-1 receptor antagonist gene. (PMID: 10512743) Mulero J.J. … Ford J.E. (Biochem. Biophys. Res. Commun. 1999) 2 3 4 22 64
  3. Two novel IL-1 family members, IL-1 delta and IL-1 epsilon, function as an antagonist and agonist of NF-kappa B activation through the orphan IL-1 receptor-related protein 2. (PMID: 11466363) Debets R. … Kastelein R.A. (J. Immunol. 2001) 3 4 22 64
  4. A tissue specific IL-1 receptor antagonist homolog from the IL-1 cluster lacks IL-1, IL-1ra, IL-18 and IL-18 antagonist activities. (PMID: 11093146) Barton J.L. … Nicklin M.J.H. (Eur. J. Immunol. 2000) 3 4 22 64
  5. Mutation analysis of the IL36RN gene in 14 Japanese patients with generalized pustular psoriasis. (PMID: 22903787) Farooq M. … Shimomura Y. (Hum. Mutat. 2013) 3 4 64

Products for IL36RN Gene

Sources for IL36RN Gene

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