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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

IL2RB Gene

protein-coding   GIFtS: 66
GCID: GC22M037515

interleukin 2 receptor, beta

(Previous names: interleukin 15 receptor, beta )
(Previous symbol: IL15RB)
 Explore 179 diseases affiliated with
IL2RB via our new
 Human Malady Compendium 
Biological research products
for IL2RB
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Interleukin 2 Receptor, Beta1 2     IL-2 Receptor Subunit Beta2 3
CD1221 2     IL-2R Subunit Beta2 3
IL15RB1 2     P751
Interleukin 15 Receptor, Beta1 2     P70-752
High Affinity IL-2 Receptor Subunit Beta2 3     High Affinity IL-2 Receptor Beta Subunit2
IL-2RB2 3     Interleukin-2 Receptor Subunit Beta2
CD122 Antigen2 3     P70-752

External Ids:    HGNC: 60091   Entrez Gene: 35602   Ensembl: ENSG000001003857   OMIM: 1467105   UniProtKB: P147843   

Export aliases for IL2RB gene to outside databases

Previous GC identifers: GC22M034136 GC22M035764 GC22M035846 GC22M020487


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for IL2RB:
The interleukin 2 receptor, which is involved in T cell-mediated immune responses, is present in 3 forms with respect
to ability to bind interleukin 2. The low affinity form is a monomer of the alpha subunit and is not involved in
signal transduction. The intermediate affinity form consists of an alpha/beta subunit heterodimer, while the high
affinity form consists of an alpha/beta/gamma subunit heterotrimer. Both the intermediate and high affinity forms of
the receptor are involved in receptor-mediated endocytosis and transduction of mitogenic signals from interleukin 2.
The protein encoded by this gene represents the beta subunit and is a type I membrane protein. (provided by RefSeq,
Jul 2008)

UniProtKB/Swiss-Prot: IL2RB_HUMAN, P14784
Function: Receptor for interleukin-2. This beta subunit is involved in receptor mediated endocytosis and transduces the
mitogenic signals of IL2

Gene Wiki entry for IL2RB


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011520.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the IL2RB gene promoter:
         Elk-1   GATA-3   STAT5A   GATA-2   GATA-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidIL2RB promoter sequence
   Search SABiosciences Chromatin IP Primers for IL2RB

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat IL2RB


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22q13.1   Ensembl cytogenetic band:  22q12.3   HGNC cytogenetic band: 22q13

IL2RB Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
IL2RB gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22M037515:  view genomic region     (about GC identifiers)

Start:
37,515,126 bp from pter      End:
37,571,094 bp from pter
Size:
55,969 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: IL2RB_HUMAN, P14784 (See protein sequence)
Recommended Name: Interleukin-2 receptor subunit beta precursor  
Size: 551 amino acids; 61117 Da
Subunit: Non-covalent dimer of an alpha and a beta subunit. IL2R exists in 3 different forms: a high affinity dimer, an
intermediate affinity monomer (beta subunit), and a low affinity monomer (alpha subunit). The high and intermediate
affinity forms also associate with a gamma subunit. Interacts with SHB upon interleukin stimulation. Interacts with
HTLV-1 accessory protein p12I
Subcellular location: Membrane; Single-pass type I membrane protein
6 PDB 3D structures from and Proteopedia for IL2RB:
1ILM (3D)        1ILN (3D)        2B5I (3D)        2ERJ (3D)        3QAZ (3D)        4GS7 (3D)    
Secondary accessions: B2R765

Explore the universe of human proteins at neXtProt for IL2RB: NX_P14784

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P14784

  • IL2RB Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_000869.1  
    ENSEMBL proteins: 
     ENSP00000392447   ENSP00000216223   ENSP00000403731   ENSP00000402685   ENSP00000400416  
     ENSP00000401020  
    Reactome Protein details: P14784
    Human Recombinant Protein Products: 
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    R&D Systems Recombinant & Natural Proteins for IL2RB (IL-2 R beta)
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    OriGene Protein Over-expression Lysate: IL2RB
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    Novus Biologicals IL2RB Proteins
    Novus Biologicals IL2RB Lysates
    Sino Biological Recombinant Protein for IL2RB
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS8514792
    GO:0009897external side of plasma membrane ISS--


    IL2RB for ontologies           About GeneDecksing



    IL2RB Antibody Products: 
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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    IL2RB for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR003961 Fibronectin_type3
     IPR013783 Ig-like_fold
     IPR003531 Hempt_rcpt_S_F1_CS

    Graphical View of Domain Structure for InterPro Entry P14784

    ProtoNet protein and cluster: P14784

    1 Blocks protein family: IPB003531 Short hematopoietin receptor

    UniProtKB/Swiss-Prot: IL2RB_HUMAN, P14784
    Domain: The WSXWS motif appears to be necessary for proper protein folding and thereby efficient intracellular
    transport and cell-surface receptor binding
    Domain: The box 1 motif is required for JAK interaction and/or activation
    Similarity: Belongs to the type I cytokine receptor family. Type 4 subfamily
    Similarity: Contains 1 fibronectin type-III domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: IL2RB_HUMAN, P14784
    Function: Receptor for interleukin-2. This beta subunit is involved in receptor mediated endocytosis and transduces the
    mitogenic signals of IL2

         Genatlas biochemistry entry for IL2RB:
    interleukin 2,high affinity receptor,beta chain 70-75kDa,hematopoietic receptor family,expressed in various tissues

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat IL2RB
    8/11 QIAGEN miScript miRNA Assays for microRNAs that regulate IL2RB (see all 11):
    hsa-miR-146b-3p hsa-miR-15a hsa-miR-497 hsa-miR-424 hsa-miR-24 hsa-miR-195 hsa-miR-16 hsa-miR-15b
    SwitchGear 3'UTR luciferase reporter plasmidIL2RB 3' UTR sequence
    Inhib. RNA
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat IL2RB 

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for IL2RB

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity ----
    GO:0004911contributes to interleukin-2 receptor activity TAS2467293
    GO:0019976interleukin-2 binding ISS--


    IL2RB for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for IL2RB:
     Synthetic lethal with Ras 

    Animal Models:
         Mouse knock-out Il2rbtm1Mak for IL2RB
         11 MGI mutant phenotypes (inferred from 1 allele(MGI details for Il2rb):
     behavior/neurological  cellular  embryogenesis  endocrine/exocrine gland  growth/size 
     hematopoietic system  immune system  integument  liver/biliary system  mortality/aging 
     reproductive system 

    IL2RB for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/25 super-pathways (see all 25About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Interleukin receptor SHC signaling
    Interleukin receptor SHC signaling1.00
    SHC1 mediates cytokine-induced phosphorylation of GAB20.61
    Interleukin-2 signaling0.67
    Interleukin-3, 5 and GM-CSF signaling0.57
    Phosphorylated SHC1 recruits GRB2:GAB20.61
    Signaling by Interleukins0.25
    2PEDF Induced Signaling
    STAT3 Pathway0.47
    Glucocorticoid Receptor Signaling0.27
    NFAT Signaling and Lymphocyte Interactions0.37
    Cytokine-cytokine receptor interaction0.26
    PGC1Alpha Pathway0.33
    3TGF-Beta Pathway
    TGF-Beta Pathway1.00
    JAK-STAT Pathway0.57
    MAPK Family Pathway0.60
    JNK Pathway0.50
    4Akt Signaling
    Akt Signaling1.00
    Tec Kinases Signaling0.55
    p38 Signaling0.60
    5Immune response IL-22 signaling pathway
    Immune response IL-22 signaling pathway1.00
    Immune response_IL-22 signaling pathway0.87

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for IL2RB
        Immune response IL-22 signaling pathway
    Immune response IL-2 activation and signaling pathway

    4 R&D Systems Pathways for IL2RB
        IL-2 Signaling Pathways
    IL-15 Signaling Pathways
    IL-15 Signaling and its Primary Biological Effects in Different Immune Cell Types
    IL-2 Signaling and its Primary Biological Effects in Different Immune Cell Types

    5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for IL2RB (see all 15)
        STAT3 Pathway
    Molecular Mechanisms of Cancer
    Antioxidant Action of Vitamin-C
    Glucocorticoid Receptor Signaling
    ICos-ICosL Pathway in T-Helper Cell

    2 Cell Signaling Technology (CST) Pathways for IL2RB
        Lymphocyte Signaling
    Tyrosine Kinases / Adaptors

    2 GeneGo (Thomson Reuters) Pathways for IL2RB
        Immune response IL-22 signaling pathway
    Immune response IL-2 activation and signaling pathway

    5/8 BioSystems Pathways for IL2RB (see all 8
        IL-5 Signaling Pathway
    IL-2 Signaling Pathway
    IL2-mediated signaling events
    Downstream signaling in naive CD8+ T cells
    IL2 signaling events mediated by PI3K

    5/8        Reactome Pathways for IL2RB (see all 8)
        SHC1 mediates cytokine-induced phosphorylation of GAB2
    Interleukin receptor SHC signaling
    Interleukin-2 signaling
    Phosphorylated SHC1 recruits GRB2:GAB2
    Cytokine Signaling in Immune system


    4         Kegg Pathways  (Kegg details for IL2RB):
        Cytokine-cytokine receptor interaction
    Endocytosis
    Jak-STAT signaling pathway
    Measles


    IL2RB for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for IL2RB

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/91 Interacting proteins for IL2RB (P147842, 3 ENSP000002162234) via UniProtKB, MINT, STRING, and/or I2D (see all 91)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    STAT5AP422292, 3, ENSP000003412084MINT-8035160 I2D: score=4 STRING: ENSP00000341208
    STAT5BP516922, 3, ENSP000002933284MINT-8035171 I2D: score=4 STRING: ENSP00000293328
    SHBQ154642, 3, ENSP000003669364MINT-8035186 I2D: score=3 STRING: ENSP00000366936
    GNB2L1P632443, ENSP000003660134I2D: score=4 STRING: ENSP00000366013
    SHC1P293533, ENSP000004013034I2D: score=4 STRING: ENSP00000401303
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006461protein complex assembly TAS2467293
    GO:0007165signal transduction TAS2785715
    GO:0019048virus-host interaction IEA--
    GO:0019221cytokine-mediated signaling pathway IDA7736574
    GO:0038110interleukin-2-mediated signaling pathway TAS2467293


    IL2RB for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    IL2RB for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for IL2RB

    4 DrugBank Compounds for IL2RB    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    AldesleukinIL-2 (see all 4)85898-30-2targetagonist modulator16542139 16617454 16569767 11752352 16477002 16596189
    Basiliximabchimeric mouse-human antiCD25 (see all 2)152923-56-3targetantibody11840795 11752352 12826150 10188761 12667677 10708100
    DaclizumabAnti-IL-2 (see all 3)152923-56-3targetantibody15022409 2571203 11752352 2647626 12372041 15814281
    Denileukin diftitoxDiphtheria toxin precursor (see all 3)173146-27-5targetagonist16516670 15811959 11752352 17187516 18684057

    10/118 Novoseek chemical compound relationships for IL2RB gene (see all 118)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    daclizumab 75.5 25 11359452 (2), 20415630 (2), 9794841 (1), 11004222 (1) (see all 21)
    neopterin 74.5 56 9892527 (5), 7647844 (3), 17975200 (2), 1606739 (2) (see all 41)
    okt3 66.8 13 2148645 (2), 2121373 (2), 1916932 (1), 8027539 (1) (see all 9)
    denileukin diftitox 65.3 12 15353540 (1), 19707452 (1), 16410787 (1), 18295790 (1) (see all 6)
    basiliximab 62.4 14 12667677 (2), 11840795 (2), 10188761 (1), 17150025 (1) (see all 10)
    cyclosporin a 58.7 30 1864010 (2), 1864013 (1), 1346344 (1), 7509146 (1) (see all 26)
    r-il-2 53.8 1 7576120 (1)
    thymoglobulin 53.4 7 15041353 (1), 15575919 (1), 17927304 (1), 19236436 (1) (see all 7)
    ionomycin 50.8 5 8344700 (1), 1654606 (1), 2017664 (1), 11347470 (1) (see all 5)
    tyrosine 50.4 68 1639773 (3), 8089104 (3), 2007186 (3), 7612266 (2) (see all 50)

    Search CenterWatch for drugs/clinical trials and news about IL2RB 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for IL2RB gene: 
    NM_000878.3  

    Unigene Cluster for IL2RB:

    Interleukin 2 receptor, beta
    Hs.474787  [show with all ESTs]
    Unigene Representative Sequence: NM_000878
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000447922 ENST00000216223(uc003aqv.1) ENST00000483573 ENST00000453962
    ENST00000429622 ENST00000461607 ENST00000440958 ENST00000445595

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    hsa-miR-146b-3p hsa-miR-15a hsa-miR-497 hsa-miR-424 hsa-miR-24 hsa-miR-195 hsa-miR-16 hsa-miR-15b
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    Inhib. RNA
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    Clone
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    Additional cDNA sequence: 

    AK312860.1 BC025691.1 CR456506.1 M26062.1 

    7 DOTS entries:

    DT.312677  DT.120651820  DT.120651728  DT.120651741  DT.91695341  DT.65286096  DT.91692959 

    24/209 AceView cDNA sequences (see all 209):

    H55722 AL708630 BF223041 BQ008149 NM_031910 CD633231 AY358374 BU542015 
    BU859813 H55257 BC025691 T28565 AI989994 BM722009 H55712 BX339049 
    CR606760 NM_182486 BU857654 BQ707555 AI968918 M26062 BQ712725 AK128125 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for IL2RB    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9 ^ 10
    SP1:                          -                       -                                             
    SP2:                          -           -     -     -     -                                       
    SP3:                          -                                                                     
    SP4:                                                                                                


    ECgene alternative splicing isoforms for IL2RB

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    IL2RB expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCCCCTCCTG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    IL2RB expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    BloodPeripheral BloodNatural Killer CellsBlood
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See IL2RB Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for IL2RB

    SOURCE GeneReport for Unigene cluster: Hs.474787
        SABiosciences Expression via Pathway-Focused PCR Arrays including IL2RB: 
              Interferons & Receptors in human mouse rat
              Inflammatory Cytokines & Receptors in human mouse rat
              T-Cell Anergy & Immune Tolerance in human mouse rat
              Inflammatory Response & Autoimmunity 384HT in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for IL2RB gene from 3/9 species (see all 9)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves IL2RB6
    Uncharacterized protein
    29(a)
    1 ↔ 1
    1(53430349-53440124)
    lizard
    (Anolis carolinensis)
    Reptilia IL2RB6
    --
    33(a)
    1 ↔ 1
    5(22756911-22762393)
    zebrafish
    (Danio rerio)
    Actinopterygii il2rb1 interleukin 2 receptor, beta 43.52(n)
    32.22(a)
      793920  NM_001128267.1  NP_001121739.1 


    ENSEMBL Gene Tree for IL2RB (if available)
    TreeFam Gene Tree for IL2RB (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for IL2RB gene

    IL2RB for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for IL2RB
    PGOHUM00000250326


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/613 NCBI SNPs in IL2RB are shown (see all 613    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 22 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs32183361,2
    C,F,H,--37521478(-) CCAGAC/TCAGGG 1 -- ds50016Minor allele frequency- T:0.01NS EA 504
    rs1451375261,2
    --37521544(+) GGGGG-/ATAGAG 1 -- ds50010--------
    rs588099631,2
    C,--37521548(+) TAGAG-/AGGGGG 1 -- ds50010--------
    rs2015612361,2
    --37521548(+) GATAG-/AGGGGG 1 -- ds50010--------
    rs1468544241,2
    C,--37521646(+) TATTT-/CCCCAG 1 -- ds50010--------
    rs32183351,2
    C,--37521662(-) TCCCAC/TAAGTC 1 -- ds50012Minor allele frequency- T:0.01NS 82
    rs1862350861,2
    --37521670(+) GGATAA/TGGCCA 1 -- ds50010--------
    rs1889496841,2
    --37521802(+) GTCTTC/TGACAG 1 -- ds50010--------
    rs1813940081,2
    --37521838(+) TTTAAG/TAGACA 1 -- ds50010--------
    rs1858205031,2
    --37521859(+) CGCAGA/GCAATG 1 -- ds50010--------

    HapMap Linkage Disequilibrium report for IL2RB (37515126 - 37571094 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for IL2RB
         1 CNV: 47855

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    IL2RB for disorders           About GeneDecksing

    OMIM gene information: 146710    OMIM disorders: --

    20/179 diseases for IL2RB (see all 179):    About MalaCards
    graft versus host disease    central pontine myelinolysis    polymyalgia rheumatica    epidermolysis bullosa acquisita
    b-cell non-hodgkin lymphoma    severe combined immunodeficiency    common variable immunodeficiency    diffuse large b-cell lymphoma
    human t-cell leukemia virus type 1    acute graft versus host disease    thrombotic thrombocytopenic purpura    non-hodgkin lymphoma
    epidermolysis bullosa    occipital neuralgia    tropical spastic paraparesis    infectious mononucleosis
    mycosis fungoides    dermatitis herpetiformis    large granular lymphocyte leukemia    extramedullary plasmacytoma

    10/94 Novoseek disease relationships for IL2RB gene (see all 94)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    severe combined immunodeficiency, x-linked 72.6 11 16138102 (1), 7718508 (1), 7523745 (1), 7632950 (1) (see all 9)
    necrosis 63.9 160 11505128 (2), 1910217 (2), 9060545 (2), 8146526 (2) (see all 99)
    tumors 50 172 16996570 (3), 8146526 (3), 10685665 (3), 11505128 (2) (see all 99)
    autoimmune diseases 48.2 17 1934612 (1), 8580481 (1), 15528977 (1), 2081786 (1) (see all 17)
    leukemia hairy cell 47.8 5 2072745 (1), 8107487 (1), 8329708 (1), 1700727 (1) (see all 5)
    leukemia t-cell 45.9 6 8102412 (1), 1379847 (1), 2298500 (1), 8648694 (1) (see all 5)
    diphtheria 45.7 7 15353540 (1), 16586495 (1), 9796831 (1), 16410787 (1) (see all 7)
    metastatic melanoma 41.9 1 10711641 (1)
    htlv-i infections 41.8 1 1982452 (1)
    rheumatoid arthritis 41.4 15 2289327 (2), 7738942 (2), 8039284 (2), 7921769 (1) (see all 12)

    Genetic Association Database (GAD): IL2RB
    Human Genome Epidemiology (HuGE) Navigator: IL2RB (39 documents)

    Export disorders for IL2RB gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for IL2RB gene, integrated from 9 sources (see all 1209):
    (articles sorted by number of sources associating them with IL2RB)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Crystal structure of the IL-2 signaling complex: paradigm for a heterotrimeric cytokine receptor. (PubMed id 16477002)1, 2, 7 Stauber D.J.... Wilson I.A. (2006)
    2. IL-2 receptor signaling through the Shb adapter protein in T and NK cells. (PubMed id 12200137)1, 2, 9 Lindholm C.K. (2002)
    3. The human T-cell leukemia/lymphotropic virus type 1 p12I proteins bind the interleukin-2 receptor beta and gammac chains and affects their expression on the cell surface. (PubMed id 8648694)1, 2, 9 Mulloy J.C.... Franchini G. (1996)
    4. Structure of the quaternary complex of interleukin-2 with its alpha, beta, and gammac receptors. (PubMed id 16293754)1, 2 Wang X.... Garcia K.C. (2005)
    5. Bipolar I disorder and schizophrenia: a 440-single-nucleotide polymorphism screen of 64 candidate genes among Ashkenazi Jewish case-parent trios. (PubMed id 16380905)1, 4 Fallin M.D....Pulver A.E. (2005)
    6. A genome annotation-driven approach to cloning the human ORFeome. (PubMed id 15461802)1, 2 Collins J.E.... Dunham I. (2004)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    8. Genetic variations in humans associated with differences in the course of hepatitis C. (PubMed id 15063762)1, 4 Saito T....Kawata S. (2004)
    9. Chagas' disease susceptibility/resistance: linkage disequilibrium analysis suggests epistasis between major histocompatibility complex and interleukin-10. (PubMed id 15191519)1, 4 Moreno M....Arcos-Burgos M. (2004)
    10. The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3560 HGNC: 6009 AceView: IL2RBandC1QTNF6 Ensembl:ENSG00000100385 euGenes: HUgn3560
    ECgene: IL2RB Kegg: 3560 H-InvDB: IL2RB

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for IL2RB Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for IL2RB Genetics and Cytogenetics in Oncology and Haematology
    SeattleSNPshttp://pga.gs.washington.edu/data/il2rb/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for IL2RB gene:
    Search GeneIP for patents involving IL2RB

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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