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Aliases for IL21R-AS1 Gene

Subcategory (RNA class) for IL21R-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL21R-AS1 Gene

  • IL21R Antisense RNA 1 2 3 5
  • IL21R Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IL21R-AS1 Gene

Summaries for IL21R-AS1 Gene

GeneCards Summary for IL21R-AS1 Gene

IL21R-AS1 (IL21R Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL21R-AS1 Gene

Genomics for IL21R-AS1 Gene

Regulatory Elements for IL21R-AS1 Gene

Enhancers for IL21R-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F027460 1.3 Ensembl ENCODE 37.3 -10.3 -10283 6.7 NFIA MAX NR2F2 JUND POLR2A FOS MLLT1 PRDM1 IL21R-AS1 GTF3C1
GH16F027469 0.5 ENCODE 37.2 -18.1 -18071 3.8 ATF1 PKNOX1 MLX ARID4B DMAP1 ZNF48 FOS ZNF263 SP5 NCOA1 IL21R-AS1 GTF3C1
GH16F027474 1.1 Ensembl ENCODE 36.8 -22.6 -22621 2.4 ZNF316 JUND JUN SCRT2 FOS MAFK IL21R-AS1 GTF3C1
GH16F027482 0.2 ENCODE 34.7 -29.6 -29611 1.7 RFX1 MAFK IL21R-AS1 GTF3C1
GH16F027520 0.8 FANTOM5 ENCODE 33.9 -67.8 -67774 1.4 SCRT2 ZIC2 IL21R-AS1 GTF3C1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IL21R-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for IL21R-AS1 Gene

Chromosome:
16
Start:
27,447,669 bp from pter
End:
27,453,393 bp from pter
Size:
5,725 bases
Orientation:
Minus strand

Genomic View for IL21R-AS1 Gene

Genes around IL21R-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL21R-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL21R-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL21R-AS1 Gene

Proteins for IL21R-AS1 Gene

Post-translational modifications for IL21R-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL21R-AS1 Gene

Domains & Families for IL21R-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL21R-AS1 Gene

Function for IL21R-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL21R-AS1 Gene

Localization for IL21R-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IL21R-AS1 Gene

Pathways & Interactions for IL21R-AS1 Gene

SuperPathways for IL21R-AS1 Gene

No Data Available

Interacting Proteins for IL21R-AS1 Gene

Gene Ontology (GO) - Biological Process for IL21R-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL21R-AS1 Gene

Transcripts for IL21R-AS1 Gene

mRNA/cDNA for IL21R-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IL21R-AS1 Gene

IL21R antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IL21R-AS1 Gene

No ASD Table

Relevant External Links for IL21R-AS1 Gene

GeneLoc Exon Structure for
IL21R-AS1
ECgene alternative splicing isoforms for
IL21R-AS1

Expression for IL21R-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IL21R-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL21R-AS1 Gene

This gene is overexpressed in Whole Blood (x4.2).

SOURCE GeneReport for Unigene cluster for IL21R-AS1 Gene:

Hs.660935
genes like me logo Genes that share expression patterns with IL21R-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IL21R-AS1 Gene

Orthologs for IL21R-AS1 Gene

Evolution for IL21R-AS1 Gene

ENSEMBL:
Gene Tree for IL21R-AS1 (if available)
TreeFam:
Gene Tree for IL21R-AS1 (if available)

No data available for Orthologs for IL21R-AS1 Gene

Paralogs for IL21R-AS1 Gene

No data available for Paralogs for IL21R-AS1 Gene

Variants for IL21R-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL21R-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs56148525 Uncertain significance 27,448,699(+) CTGAC(A/G)GTGTG nc-transcript-variant, reference, missense
rs113148369 -- 27,448,698(+) TCTGA(C/T)GGTGT nc-transcript-variant, reference, synonymous-codon
rs113205722 -- 27,453,112(+) CCATG(-/C)TCTCT nc-transcript-variant
rs113965689 -- 27,452,327(+) GAGAC(C/T)AGCCT intron-variant, downstream-variant-500B
rs115970520 -- 27,452,749(+) TTGCC(A/G)TCTGC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for IL21R-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3404624 CNV insertion 20981092
nsv1059454 CNV gain 25217958
nsv833179 CNV loss 17160897

Relevant External Links for IL21R-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL21R-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for IL21R-AS1 Gene

Disorders for IL21R-AS1 Gene

Relevant External Links for IL21R-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL21R-AS1

No disorders were found for IL21R-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL21R-AS1 Gene

Publications for IL21R-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for IL21R-AS1 Gene

Sources for IL21R-AS1 Gene

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