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Aliases for IL21R-AS1 Gene

Subcategory (RNA class) for IL21R-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL21R-AS1 Gene

  • IL21R Antisense RNA 1 2 3 5
  • IL21R Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IL21R-AS1 Gene

Summaries for IL21R-AS1 Gene

GeneCards Summary for IL21R-AS1 Gene

IL21R-AS1 (IL21R Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IL21R-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL21R-AS1 Gene

Genomics for IL21R-AS1 Gene

GeneHancer (GH) Regulatory Elements for IL21R-AS1 Gene

Promoters and enhancers for IL21R-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I027548 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 31.9 -96.4 -96444 3.5 HDGF FOXA2 ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 YY1 SLC30A9 KIAA0556 GTF3C1 IL21R-AS1
GH16I027546 Enhancer 1.1 Ensembl ENCODE 32.4 -94.1 -94055 0.9 ATF1 PKNOX1 ARNT TCF12 ZNF766 E2F8 FOS ATF7 NCOA1 ZNF184 IL21R-AS1 GTF3C1
GH16I027577 Enhancer 1.1 Ensembl ENCODE 31.9 -125.6 -125640 2.1 FOXA2 ZFP64 ARID4B ZNF48 FOS SP3 SP5 JUNB ZHX2 MXD4 IL21R-AS1 GSG1L KIAA0556 ENSG00000261736
GH16I027469 Enhancer 0.9 ENCODE 37.2 -18.1 -18071 3.8 PKNOX1 ATF1 FOXA2 MLX ARNT ARID4B DMAP1 ZNF48 ETS1 TCF12 IL21R-AS1 GTF3C1
GH16I027460 Enhancer 0.7 ENCODE dbSUPER 37.3 -10.3 -10283 6.7 KLF1 MAX PRDM1 NR2F2 IL21R-AS1 GTF3C1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IL21R-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL21R-AS1 Gene

Genomic Locations for IL21R-AS1 Gene
chr16:27,447,669-27,453,393
(GRCh38/hg38)
Size:
5,725 bases
Orientation:
Minus strand
chr16:27,458,990-27,464,714
(GRCh37/hg19)

Genomic View for IL21R-AS1 Gene

Genes around IL21R-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL21R-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL21R-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL21R-AS1 Gene

Proteins for IL21R-AS1 Gene

Post-translational modifications for IL21R-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL21R-AS1 Gene

Domains & Families for IL21R-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL21R-AS1 Gene

Function for IL21R-AS1 Gene

Phenotypes From GWAS Catalog for IL21R-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL21R-AS1 Gene

Localization for IL21R-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL21R-AS1 Gene

Pathways & Interactions for IL21R-AS1 Gene

SuperPathways for IL21R-AS1 Gene

No Data Available

Interacting Proteins for IL21R-AS1 Gene

Gene Ontology (GO) - Biological Process for IL21R-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL21R-AS1 Gene

Drugs & Compounds for IL21R-AS1 Gene

No Compound Related Data Available

Transcripts for IL21R-AS1 Gene

mRNA/cDNA for IL21R-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IL21R-AS1 Gene

IL21R antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IL21R-AS1 Gene

No ASD Table

Relevant External Links for IL21R-AS1 Gene

GeneLoc Exon Structure for
IL21R-AS1
ECgene alternative splicing isoforms for
IL21R-AS1

Expression for IL21R-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL21R-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL21R-AS1 Gene

This gene is overexpressed in Whole Blood (x4.2).

SOURCE GeneReport for Unigene cluster for IL21R-AS1 Gene:

Hs.660935
genes like me logo Genes that share expression patterns with IL21R-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL21R-AS1 Gene

Orthologs for IL21R-AS1 Gene

Evolution for IL21R-AS1 Gene

ENSEMBL:
Gene Tree for IL21R-AS1 (if available)
TreeFam:
Gene Tree for IL21R-AS1 (if available)

No data available for Orthologs for IL21R-AS1 Gene

Paralogs for IL21R-AS1 Gene

No data available for Paralogs for IL21R-AS1 Gene

Variants for IL21R-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL21R-AS1 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs113148369 benign, IL21R immunodeficiency 27,448,698(-) C/T non_coding_transcript_variant
rs141625630 uncertain-significance, IL21R immunodeficiency 27,449,108(-) C/A/T non_coding_transcript_variant
rs3093386 benign, IL21R immunodeficiency 27,449,116(-) G/A non_coding_transcript_variant
rs56148525 uncertain-significance, Inborn genetic diseases 27,448,699(-) G/A non_coding_transcript_variant
rs1000126083 -- 27,447,556(-) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for IL21R-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3404624 CNV insertion 20981092
nsv1059454 CNV gain 25217958
nsv833179 CNV loss 17160897

Additional Variant Information for IL21R-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL21R-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for IL21R-AS1 Gene

Disorders for IL21R-AS1 Gene

Additional Disease Information for IL21R-AS1

No disorders were found for IL21R-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL21R-AS1 Gene

Publications for IL21R-AS1 Gene

  1. Circulating 'lncRNA OTTHUMT00000387022' from monocytes as a novel biomarker for coronary artery disease. (PMID: 26857419) Cai Y … Zhou L (Cardiovascular research 2016) 2 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for IL21R-AS1 Gene

Sources for IL21R-AS1 Gene

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