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Aliases for IL21-AS1 Gene

Subcategory (RNA class) for IL21-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL21-AS1 Gene

  • IL21 Antisense RNA 1 2 3 5
  • IL21 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IL21-AS1 Gene

Previous GeneCards Identifiers for IL21-AS1 Gene

  • GC04P123541

Summaries for IL21-AS1 Gene

GeneCards Summary for IL21-AS1 Gene

IL21-AS1 (IL21 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IL21-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL21-AS1 Gene

Genomics for IL21-AS1 Gene

Regulatory Elements for IL21-AS1 Gene

Enhancers for IL21-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H122795 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.3 +179.2 179169 4.5 HDAC1 TBP PKNOX1 ZBTB40 ZNF766 ZNF366 ATF7 CEBPB USF2 REST FGF2 NUDT6 SPATA5 IL21-AS1 CETN4P SPRY1 RPL34P12 LOC727709
GH04H122699 1.2 Ensembl ENCODE 10.1 +81.3 81311 1 HDAC1 HDGF PKNOX1 ATF1 NFRKB ZBTB40 ZNF766 CBX5 GATA2 EGR1 SPATA5 EXOSC9 ENSG00000237868 FGF2 IL21-AS1 CETN4P BBS12 IL21
GH04H122660 1.1 Ensembl ENCODE 11 +42.5 42517 1.3 HDAC1 FOXA2 ATF1 ETV1 ZNF175 CEBPG ZNF766 CTBP1 GATA2 FOXK2 IL21-AS1 BBS12 CETN4P FGF2 IL21
GH04H122872 1.3 Ensembl ENCODE dbSUPER 9 +255.0 255002 2.2 PKNOX1 JUN ZNF175 CEBPG FOSL1 FOS ATF7 TRIM24 ZNF584 SMARCE1 FGF2 IL21-AS1 NUDT6 ENSG00000273007 RPS26P23
GH04H122583 0.9 Ensembl ENCODE 11.1 -34.5 -34478 1.4 ESRRA JUN ZNF133 JUNB BATF JUND POLR2A SCRT2 RUNX3 IL21-AS1 KIAA1109 IL2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IL21-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL21-AS1 Gene

Genomic Locations for IL21-AS1 Gene
chr4:122,618,983-122,689,156
(GRCh38/hg38)
Size:
70,174 bases
Orientation:
Plus strand
chr4:123,540,138-123,610,311
(GRCh37/hg19)

Genomic View for IL21-AS1 Gene

Genes around IL21-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL21-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL21-AS1 Gene

Proteins for IL21-AS1 Gene

Post-translational modifications for IL21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL21-AS1 Gene

Domains & Families for IL21-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL21-AS1 Gene

Function for IL21-AS1 Gene

Phenotypes From GWAS Catalog for IL21-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL21-AS1 Gene

Localization for IL21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL21-AS1 Gene

Pathways & Interactions for IL21-AS1 Gene

SuperPathways for IL21-AS1 Gene

No Data Available

Interacting Proteins for IL21-AS1 Gene

Gene Ontology (GO) - Biological Process for IL21-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL21-AS1 Gene

Drugs & Compounds for IL21-AS1 Gene

No Compound Related Data Available

Transcripts for IL21-AS1 Gene

mRNA/cDNA for IL21-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IL21-AS1 Gene

IL21 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IL21-AS1 Gene

No ASD Table

Relevant External Links for IL21-AS1 Gene

GeneLoc Exon Structure for
IL21-AS1
ECgene alternative splicing isoforms for
IL21-AS1

Expression for IL21-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL21-AS1 Gene

This gene is overexpressed in Testis (x28.5), Vagina (x6.8), and Bladder (x6.0).

SOURCE GeneReport for Unigene cluster for IL21-AS1 Gene:

Hs.439487
genes like me logo Genes that share expression patterns with IL21-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL21-AS1 Gene

Orthologs for IL21-AS1 Gene

Evolution for IL21-AS1 Gene

ENSEMBL:
Gene Tree for IL21-AS1 (if available)
TreeFam:
Gene Tree for IL21-AS1 (if available)

No data available for Orthologs for IL21-AS1 Gene

Paralogs for IL21-AS1 Gene

No data available for Paralogs for IL21-AS1 Gene

Variants for IL21-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL21-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs587777338 Pathogenic 122,620,866(+) TTTTC(A/G)GCTGA reference, missense, splice-acceptor-variant
rs1000007262 -- 122,625,443(+) TTCCA(A/G)GAATA nc-transcript-variant
rs1000124408 -- 122,676,101(+) AGATT(G/T)TATTT intron-variant
rs1000142025 -- 122,636,255(+) ACCAT(C/T)TTGCA intron-variant
rs1000154447 -- 122,665,031(+) AAACA(A/G)TGAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IL21-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3602030 CNV loss 21293372

Relevant External Links for IL21-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for IL21-AS1 Gene

Disorders for IL21-AS1 Gene

Relevant External Links for IL21-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL21-AS1

No disorders were found for IL21-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL21-AS1 Gene

Publications for IL21-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for IL21-AS1 Gene

Sources for IL21-AS1 Gene

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