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Aliases for IL21-AS1 Gene

Subcategory (RNA class) for IL21-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for IL21-AS1 Gene

  • IL21 Antisense RNA 1 2 3
  • IL21 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IL21-AS1 Gene

ORGUL Members for IL21-AS1 Gene

Previous GeneCards Identifiers for IL21-AS1 Gene

  • GC04P123541

Summaries for IL21-AS1 Gene

GeneCards Summary for IL21-AS1 Gene

IL21-AS1 (IL21 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for IL21-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for IL21-AS1 Gene

Genomics for IL21-AS1 Gene

Genomic Location for IL21-AS1 Gene

Start:
122,618,983 bp from pter
End:
122,689,156 bp from pter
Size:
70,174 bases
Orientation:
Plus strand

Genomic View for IL21-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IL21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL21-AS1 Gene

No data available for Regulatory Elements for IL21-AS1 Gene

Proteins for IL21-AS1 Gene

Post-translational modifications for IL21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL21-AS1 Gene

Domains for IL21-AS1 Gene

Gene Families for IL21-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IL21-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL21-AS1 Gene

Function for IL21-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IL21-AS1 Gene

Localization for IL21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IL21-AS1 Gene

Pathways for IL21-AS1 Gene

SuperPathways for IL21-AS1 Gene

No Data Available

Interacting Proteins for IL21-AS1 Gene

Gene Ontology (GO) - Biological Process for IL21-AS1 Gene

None

No data available for Pathways by source for IL21-AS1 Gene

Transcripts for IL21-AS1 Gene

mRNA/cDNA for IL21-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IL21-AS1 Gene

IL21 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IL21-AS1 Gene

No ASD Table

Relevant External Links for IL21-AS1 Gene

GeneLoc Exon Structure for
IL21-AS1
ECgene alternative splicing isoforms for
IL21-AS1

Expression for IL21-AS1 Gene

mRNA expression in normal human tissues for IL21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL21-AS1 Gene

This gene is overexpressed in Testis (28.5), Vagina (6.8), and Bladder (6.0).

SOURCE GeneReport for Unigene cluster for IL21-AS1 Gene Hs.439487

genes like me logo Genes that share expressions with IL21-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for IL21-AS1 Gene

Orthologs for IL21-AS1 Gene

Evolution for IL21-AS1 Gene

ENSEMBL:
Gene Tree for IL21-AS1 (if available)
TreeFam:
Gene Tree for IL21-AS1 (if available)

No data available for Orthologs for IL21-AS1 Gene

Paralogs for IL21-AS1 Gene

No data available for Paralogs for IL21-AS1 Gene

Variants for IL21-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL21-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs309387 -- 122,688,782(+) AGTTG(A/T)TTGGA nc-transcript-variant
rs309388 -- 122,688,957(+) CTTAT(C/T)AGCAA nc-transcript-variant
rs309389 -- 122,689,551(+) TCTAT(C/G)AGTAT downstream-variant-500B
rs309390 -- 122,689,575(+) GGTGA(A/G)TGGGA downstream-variant-500B
rs309391 -- 122,689,609(+) CCTGT(A/G)TCCTT downstream-variant-500B

Relevant External Links for IL21-AS1 Gene

HapMap Linkage Disequilibrium report
IL21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for IL21-AS1 Gene

Disorders for IL21-AS1 Gene

No disorders were found for IL21-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for IL21-AS1 Gene

Publications for IL21-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for IL21-AS1 Gene

Sources for IL21-AS1 Gene

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