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Aliases for IL20RB-AS1 Gene

Subcategory (RNA class) for IL20RB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL20RB-AS1 Gene

  • IL20RB Antisense RNA 1 2 3 5
  • IL20RB Antisense RNA 1 (Non-Protein Coding) 2

External Ids for IL20RB-AS1 Gene

Previous GeneCards Identifiers for IL20RB-AS1 Gene

  • GC00U933355
  • GC03M136678

Summaries for IL20RB-AS1 Gene

GeneCards Summary for IL20RB-AS1 Gene

IL20RB-AS1 (IL20RB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IL20RB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL20RB-AS1 Gene

Genomics for IL20RB-AS1 Gene

GeneHancer (GH) Regulatory Elements for IL20RB-AS1 Gene

Promoters and enhancers for IL20RB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I136982 Enhancer 0.4 ENCODE 550.8 -0.5 -511 0.1 ZFHX2 EGR2 IL20RB-AS1 GC03P137015 IL20RB GC03P136873
GH03I136954 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 38.4 +23.7 23716 7.9 FOXA2 ARNT BRCA1 POLR2B FOS ATF7 RXRA ATF4 MIER3 STAT3 IL20RB IL20RB-AS1 SLC35G2 ENSG00000242968 GC03P136873
GH03I136984 Enhancer 0.8 Ensembl ENCODE 26.7 -2.9 -2910 1.9 KLF1 MZF1 ZFHX2 GLIS1 PRDM10 EGR2 TCF7L2 ZXDB IL20RB IL20RB-AS1 NCK1 GC03P137015 GC03P136873
GH03I136951 Enhancer 0.5 ENCODE dbSUPER 27.4 +29.7 29725 1.8 FOS IL20RB-AS1 IL20RB ENSG00000273486 GC03P136873 NCK1
GH03I136802 Enhancer 1.2 Ensembl ENCODE 10.2 +179.3 179348 0.9 PKNOX1 ZNF133 FEZF1 GLI4 ZNF2 GLIS2 ZNF302 ZNF416 ATF7 JUNB MSL2 SLC35G2 ENSG00000273486 IL20RB-AS1 NCK1 STAG1 IL20RB ENSG00000242968 GC03M136767
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IL20RB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL20RB-AS1 Gene

Genomic Locations for IL20RB-AS1 Gene
chr3:136,959,125-136,982,196
(GRCh38/hg38)
Size:
23,072 bases
Orientation:
Minus strand
chr3:136,677,967-136,701,038
(GRCh37/hg19)

Genomic View for IL20RB-AS1 Gene

Genes around IL20RB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL20RB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL20RB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL20RB-AS1 Gene

Proteins for IL20RB-AS1 Gene

Post-translational modifications for IL20RB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL20RB-AS1 Gene

Domains & Families for IL20RB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL20RB-AS1 Gene

Function for IL20RB-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL20RB-AS1 Gene

Localization for IL20RB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL20RB-AS1 Gene

Pathways & Interactions for IL20RB-AS1 Gene

SuperPathways for IL20RB-AS1 Gene

No Data Available

Interacting Proteins for IL20RB-AS1 Gene

Gene Ontology (GO) - Biological Process for IL20RB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL20RB-AS1 Gene

Drugs & Compounds for IL20RB-AS1 Gene

No Compound Related Data Available

Transcripts for IL20RB-AS1 Gene

mRNA/cDNA for IL20RB-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IL20RB-AS1 Gene

No ASD Table

Relevant External Links for IL20RB-AS1 Gene

GeneLoc Exon Structure for
IL20RB-AS1
ECgene alternative splicing isoforms for
IL20RB-AS1

Expression for IL20RB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL20RB-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL20RB-AS1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x16.1), Skin - Sun Exposed (Lower leg) (x14.0), Esophagus - Mucosa (x8.3), and Vagina (x5.2).
genes like me logo Genes that share expression patterns with IL20RB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL20RB-AS1 Gene

Orthologs for IL20RB-AS1 Gene

Evolution for IL20RB-AS1 Gene

ENSEMBL:
Gene Tree for IL20RB-AS1 (if available)
TreeFam:
Gene Tree for IL20RB-AS1 (if available)

No data available for Orthologs for IL20RB-AS1 Gene

Paralogs for IL20RB-AS1 Gene

No data available for Paralogs for IL20RB-AS1 Gene

Variants for IL20RB-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL20RB-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000251920 -- 136,971,323(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000287113 -- 136,958,809(-) C/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000392742 -- 136,957,477(-) A/G intron_variant, non_coding_transcript_variant
rs1000419000 -- 136,952,547(-) C/T intron_variant
rs1000475456 -- 136,950,929(-) T/C intron_variant

Additional Variant Information for IL20RB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL20RB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL20RB-AS1 Gene

Disorders for IL20RB-AS1 Gene

No disorders were found for IL20RB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IL20RB-AS1 Gene

Publications for IL20RB-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for IL20RB-AS1 Gene

Sources for IL20RB-AS1 Gene

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