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Aliases for IL20RB Gene

Aliases for IL20RB Gene

  • Interleukin 20 Receptor Subunit Beta 2 3 5
  • Fibronectin Type III Domain Containing 6 2 3 4
  • Interleukin 20 Receptor Beta Subunit 2 3
  • IL-20 Receptor Subunit Beta 3 4
  • IL-20R-Beta 3 4
  • IL-20R2 3 4
  • IL-20RB 3 4
  • FNDC6 3 4
  • DIRS1 3 4
  • Interleukin-20 Receptor Subunit Beta 3
  • Interleukin 20 Receptor Beta 2
  • Interleukin-20 Receptor II 3

External Ids for IL20RB Gene

Previous HGNC Symbols for IL20RB Gene

  • FNDC6

Previous GeneCards Identifiers for IL20RB Gene

  • GC00U990739
  • GC03P138161
  • GC03P136665
  • GC03P134052

Summaries for IL20RB Gene

Entrez Gene Summary for IL20RB Gene

  • IL20RB and IL20RA (MIM 605620) form a heterodimeric receptor for interleukin-20 (IL20; MIM 605619) (Blumberg et al., 2001 [PubMed 11163236]).[supplied by OMIM, Feb 2009]

GeneCards Summary for IL20RB Gene

IL20RB (Interleukin 20 Receptor Subunit Beta) is a Protein Coding gene. Among its related pathways are Innate Immune System and Jak-STAT signaling pathway (KEGG). GO annotations related to this gene include cytokine receptor activity and interleukin-20 binding.

UniProtKB/Swiss-Prot for IL20RB Gene

  • The IL20RA/IL20RB dimer is a receptor for IL19, IL20 and IL24. The IL22RA1/IL20RB dimer is a receptor for IL20 and IL24.

Gene Wiki entry for IL20RB Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL20RB Gene

Genomics for IL20RB Gene

Regulatory Elements for IL20RB Gene

Enhancers for IL20RB Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G136954 1.4 Ensembl ENCODE dbSUPER 38.8 +12.3 12250 7.9 FOXA2 PKNOX1 CREB3L1 ARNT BRCA1 FOS MIER3 PBX2 STAT3 NR2C1 IL20RB IL20RB-AS1 SLC35G2 ENSG00000242968
GH03G136984 1 Ensembl ENCODE 44.9 +38.9 38876 1.9 HDAC1 ESRRA KLF1 PKNOX1 ZNF507 FOXM1 ZFHX2 ZNF316 PRDM10 NR2F6 IL20RB IL20RB-AS1 NCK1 GC03P137015
GH03G136918 1.2 Ensembl ENCODE dbSUPER 34.3 -25.4 -25430 4.8 JUN ETV1 EBF1 FOSL1 ZNF316 GATA2 RELB FOS MAFK MTA2 IL20RB ENSG00000273486 NCK1 IL20RB-AS1 RAD51AP1P1
GH03G136860 1.1 ENCODE 33.4 -84.1 -84090 3.3 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 IL20RB STAG1 SLC35G2 ENSG00000273486 ENSG00000242968 NCK1 NCK1-AS1
GH03G136994 1 Ensembl ENCODE 29.8 +49.4 49411 2.5 MAX CEBPG RAD21 YY1 POLR2A GATA2 TCF7L2 STAT1 HLF USF2 IL20RB NCK1 SLC35G2 ENSG00000242968 IL20RB-AS1 GC03P137015
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IL20RB on UCSC Golden Path with GeneCards custom track

Genomic Location for IL20RB Gene

Chromosome:
3
Start:
136,946,230 bp from pter
End:
137,011,085 bp from pter
Size:
64,856 bases
Orientation:
Plus strand

Genomic View for IL20RB Gene

Genes around IL20RB on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL20RB Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL20RB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL20RB Gene

Proteins for IL20RB Gene

  • Protein details for IL20RB Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXL0-I20RB_HUMAN
    Recommended name:
    Interleukin-20 receptor subunit beta
    Protein Accession:
    Q6UXL0
    Secondary Accessions:
    • B4DL40
    • Q6P438
    • Q8IYY5
    • Q8TAJ7

    Protein attributes for IL20RB Gene

    Size:
    311 amino acids
    Molecular mass:
    35076 Da
    Quaternary structure:
    • Heterodimer with IL20RA and heterodimer with IL22RA1.

    Three dimensional structures from OCA and Proteopedia for IL20RB Gene

    Alternative splice isoforms for IL20RB Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IL20RB Gene

Post-translational modifications for IL20RB Gene

  • Glycosylation at isoforms=40 and isoforms=3134

Other Protein References for IL20RB Gene

Antibody Products

  • R&D Systems Antibodies for IL20RB (IL-20 R beta)
  • Cloud-Clone Corp. Antibodies for IL20RB

Protein Products

No data available for DME Specific Peptides for IL20RB Gene

Domains & Families for IL20RB Gene

Protein Domains for IL20RB Gene

Suggested Antigen Peptide Sequences for IL20RB Gene

Graphical View of Domain Structure for InterPro Entry

Q6UXL0

UniProtKB/Swiss-Prot:

I20RB_HUMAN :
  • Belongs to the type II cytokine receptor family.
Family:
  • Belongs to the type II cytokine receptor family.
genes like me logo Genes that share domains with IL20RB: view

Function for IL20RB Gene

Molecular function for IL20RB Gene

UniProtKB/Swiss-Prot Function:
The IL20RA/IL20RB dimer is a receptor for IL19, IL20 and IL24. The IL22RA1/IL20RB dimer is a receptor for IL20 and IL24.

Gene Ontology (GO) - Molecular Function for IL20RB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004920 interleukin-10 receptor activity IBA --
GO:0042015 interleukin-20 binding IEA --
genes like me logo Genes that share ontologies with IL20RB: view
genes like me logo Genes that share phenotypes with IL20RB: view

Animal Models for IL20RB Gene

MGI Knock Outs for IL20RB:

Animal Model Products

  • Taconic Biosciences Mouse Models for IL20RB

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for IL20RB Gene

Localization for IL20RB Gene

Subcellular locations from UniProtKB/Swiss-Prot for IL20RB Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL20RB gene
Compartment Confidence
plasma membrane 5
nucleus 2
golgi apparatus 2
extracellular 1
cytoskeleton 1
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1
cytosol 1

Gene Ontology (GO) - Cellular Components for IL20RB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IBA,IEA --
genes like me logo Genes that share ontologies with IL20RB: view

Pathways & Interactions for IL20RB Gene

genes like me logo Genes that share pathways with IL20RB: view

Pathways by source for IL20RB Gene

SIGNOR curated interactions for IL20RB Gene

Activates:
Is activated by:

Gene Ontology (GO) - Biological Process for IL20RB Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001808 negative regulation of type IV hypersensitivity IEA --
GO:0002437 inflammatory response to antigenic stimulus IEA --
GO:0002765 immune response-inhibiting signal transduction IEA --
GO:0019221 cytokine-mediated signaling pathway IEA --
GO:0032689 negative regulation of interferon-gamma production IEA --
genes like me logo Genes that share ontologies with IL20RB: view

Drugs & Compounds for IL20RB Gene

No Compound Related Data Available

Transcripts for IL20RB Gene

mRNA/cDNA for IL20RB Gene

(5) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IL20RB Gene

Interleukin 20 receptor beta:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IL20RB Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8
SP1:
SP2: - -
SP3: - -

Relevant External Links for IL20RB Gene

GeneLoc Exon Structure for
IL20RB
ECgene alternative splicing isoforms for
IL20RB

Expression for IL20RB Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL20RB Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for IL20RB Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x13.8), Skin - Sun Exposed (Lower leg) (x13.1), Esophagus - Mucosa (x10.5), and Vagina (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of IL20RB Gene:

IL20RB

SOURCE GeneReport for Unigene cluster for IL20RB Gene:

Hs.61232

mRNA Expression by UniProt/SwissProt for IL20RB Gene:

Q6UXL0-I20RB_HUMAN
Tissue specificity: Widely expressed with highest levels in skin and testis. Highly expressed in psoriatic skin.

Evidence on tissue expression from TISSUES for IL20RB Gene

  • Skin(4.6)
  • Nervous system(4)
genes like me logo Genes that share expression patterns with IL20RB: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL20RB Gene

Orthologs for IL20RB Gene

This gene was present in the common ancestor of chordates.

Orthologs for IL20RB Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IL20RB 34 35
  • 99.78 (n)
dog
(Canis familiaris)
Mammalia IL20RB 34 35
  • 88.03 (n)
cow
(Bos Taurus)
Mammalia IL20RB 34 35
  • 84.26 (n)
mouse
(Mus musculus)
Mammalia Il20rb 34 16 35
  • 82.24 (n)
rat
(Rattus norvegicus)
Mammalia Il20rb 34
  • 80.61 (n)
oppossum
(Monodelphis domestica)
Mammalia IL20RB 35
  • 65 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia IL20RB 35
  • 46 (a)
OneToOne
chicken
(Gallus gallus)
Aves IL20RB 34 35
  • 63.83 (n)
lizard
(Anolis carolinensis)
Reptilia IL20RB 35
  • 45 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia il20rb 34
  • 50.45 (n)
zebrafish
(Danio rerio)
Actinopterygii crfb16 35
  • 22 (a)
OneToOne
Species where no ortholog for IL20RB was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IL20RB Gene

ENSEMBL:
Gene Tree for IL20RB (if available)
TreeFam:
Gene Tree for IL20RB (if available)

Paralogs for IL20RB Gene

No data available for Paralogs for IL20RB Gene

Variants for IL20RB Gene

Sequence variations from dbSNP and Humsavar for IL20RB Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000084834 -- 137,004,742(+) TTGAC(A/G)GGTTT intron-variant
rs1000140701 -- 137,007,505(+) TGCCC(C/T)TCCCC intron-variant
rs1000191817 -- 137,007,753(+) AAGGC(A/G)ATGCC intron-variant
rs1000207122 -- 136,992,969(+) TCCAT(A/G)ACATT intron-variant
rs1000251920 -- 136,971,323(+) ATGGG(A/G)TTTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IL20RB Gene

Variant ID Type Subtype PubMed ID
esv3597894 CNV gain 21293372
esv3597895 CNV gain 21293372
nsv524856 CNV loss 19592680

Variation tolerance for IL20RB Gene

Residual Variation Intolerance Score: 42.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.52; 11.37% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IL20RB Gene

Human Gene Mutation Database (HGMD)
IL20RB
SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL20RB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IL20RB Gene

Disorders for IL20RB Gene

Relevant External Links for IL20RB

Genetic Association Database (GAD)
IL20RB
Human Genome Epidemiology (HuGE) Navigator
IL20RB
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL20RB

No disorders were found for IL20RB Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL20RB Gene

Publications for IL20RB Gene

  1. Interleukin 20: discovery, receptor identification, and role in epidermal function. (PMID: 11163236) Blumberg H. … Chandrasekher Y.A. (Cell 2001) 2 3 4 64
  2. Structural basis for receptor sharing and activation by interleukin-20 receptor-2 (IL-20R2) binding cytokines. (PMID: 22802649) Logsdon N.J. … Walter M.R. (Proc. Natl. Acad. Sci. U.S.A. 2012) 3 4 64
  3. Association analysis of IL20RA and IL20RB genes in psoriasis. (PMID: 18480827) Kingo K. … KA/ks S. (Genes Immun. 2008) 3 46 64
  4. Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum. (PMID: 19043545) Gieger C. … Suhre K. (PLoS Genet. 2008) 3 46 64
  5. IL-20: biological functions and clinical implications. (PMID: 16703417) Wei C.C. … Chang M.S. (J. Biomed. Sci. 2006) 2 3 64

Products for IL20RB Gene

Sources for IL20RB Gene

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