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Aliases & Descriptions for IL2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| Aldesleukin 3 | | IL-2 1, 2, 3 | | TCGF 2, 3 | | aldesleukin 2 | | interleukin-2 2 | | lymphokine 2 |
| | | Descriptions |
|---|
| T cell growth factor 2 | | T-cell growth factor 3 | | interleukin 2 2 | | involved in regulation of T-cell clonal expansion 2 |
|
| | Search outside databases for aliases for IL2 genePrevious GC identifers: GC04M124285 GC04M123765 GC04M123831 GC04M123730 |
Summaries for IL2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for IL2: The protein encoded by this gene is a secreted cytokine that is important for the proliferation of T and B lymphocytes. The receptor of this cytokine is a heterotrimeric protein complex whose gamma chain is also shared by interleukin 4 (IL4) and interleukin 7 (IL7). The expression of this gene in mature thymocytes is monoallelic, which represents an unusual regulatory mode for controlling the precise expression of a single gene. The targeted disruption of a similar gene in mice leads to ulcerative colitis-like disease, which suggests an essential role of this gene in the immune response to antigenic stimuli. [provided by RefSeq] UniProtKB/Swiss-Prot: IL2_HUMAN, P60568Function: Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. Can stimulate B-cells, monocytes, lymphokine-activated killer cells, natural killer cells, and glioma cells |
Genomic Location for IL2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the IL2 gene 
Entrez Gene cytogenetic band: 4q26-q27 Ensembl cytogenetic band: 4q27 HGNC cytogenetic band: 4q26-q27IL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure GeneLoc location for GC04M123652:
(about GC identifiers)
Start:
|
123,592,075 bp from pter |
End:
|
123,597,100 bp from pter |
Size:
|
5,026 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000004.10 NT_016354.18
| Proteins for IL2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: IL2_HUMAN, P60568 (See
protein sequence)Recommended Name: Interleukin-2 precursor Size: 153 amino acids; 17628 Da
Subcellular location: Secreted
PDB structures from and Proteopedia :1ILM (3D)
 1ILN (3D)
 1IRL (3D)
 1M47 (3D)
 1M48 (3D)
 1M49 (3D)
 1M4A (3D)
 1M4B (3D)
 1M4C (3D)
 1NBP (3D)
 1PW6 (3D)
 1PY2 (3D)
 1QVN (3D)
 1Z92 (3D)
 2B5I (3D)
 2ERJ (3D)
 3INK (3D)
 
Secondary accessions: P01585REFSEQ proteins: NP_000577.2
ENSEMBL proteins: ENSP00000226730
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: IL2 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for IL2: Assays for IL2: | Protein
Domains/ Families for IL2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P60568
ProtoNet protein and cluster: P60568 UniProtKB/Swiss-Prot: IL2_HUMAN, P60568Similarity: Belongs to the IL-2 family | Gene Function for IL2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000586
Applied Biosystems Silencer® siRNAs for IL2
Sigma-Aldrich siRNA and siRNA Panels for IL2  Sigma-Aldrich shRNA Panels and shRNA for IL2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000586                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000586                                  untagged cDNA clone in CMV expression vector: NM_000586 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000586
UniProtKB/Swiss-Prot: IL2_HUMAN, P60568Function: Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. Can stimulate B-cells, monocytes, lymphokine-activated killer cells, natural killer cells, and glioma cellsGenatlas biochemistry entry for IL2:interleukin 2,30-35kDa,involved in activation and proliferation of T cell15 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Il2):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for IL2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/12 Sigma-Aldrich "Your Favorite Gene" Pathways for IL2 (Your Favorite Gene powered by Ingenuity) (see all 12
) 
Gene Network CentralTM Interacting Genes and Proteins Network for IL2 
5/389 Interacting proteins for IL2 (ENSP000002267303) via UniProtKB, MINT, and/or STRING (see all 389
)About this table
5/16 Gene Ontology (GO) biological process terms (links to tree view) (see all 16
): About this table
|
Drugs & Compounds for IL2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for IL2 available from Tocris Bioscience About this table
UniProtKB/Swiss-Prot: IL2_HUMAN, P60568Pharmaceutical: Available under the name Proleukin (Chiron). Used in patients with renal cell carcinoma or metastatic melanoma 10/25 Novoseek chemical compound relationships for IL2 gene (see all 25
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| ionomycin |
82.75 |
310 |
2017664 (5), 9823934 (5), 7539752 (4), 11306241 (4) (see all 99) |
| il 10 |
72.59 |
98 |
9800291 (3), 11955389 (3), 8901428 (2), 9272647 (2) (see all 78) |
| r-il-2 |
72.17 |
22 |
1714392 (2), 1873855 (1), 7695972 (1), 14744937 (1) (see all 16) |
| thymidine |
68.72 |
222 |
1974593 (2), 1777232 (2), 8288318 (2), 7949016 (2) (see all 99) |
| rantes |
67.10 |
127 |
16644491 (4), 10365778 (3), 9644628 (2), 10369186 (2) (see all 99) |
| neopterin |
65.78 |
166 |
8300696 (6), 15593392 (6), 16864954 (5), 1292506 (5) (see all 72) |
| tyrosine |
63.08 |
542 |
1751780 (6), 7903276 (6), 8088325 (5), 2007186 (5) (see all 99) |
| tdac |
62.32 |
17 |
7780482 (4), 7537108 (2), 1991997 (2), 1972724 (1) (see all 7) |
| con a |
62.29 |
105 |
16055081 (4), 1372137 (4), 8092900 (3), 2054070 (3) (see all 54) |
| nkh 1 |
61.65 |
4 |
1971303 (1), 7535357 (1), 2319257 (1), 1691221 (1) |
About this table
1 PharmGKB drug compound relationship for IL2 geneAbout this table
|
Transcripts for IL2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000586
Sigma-Aldrich siRNA and siRNA Panels for IL2  Sigma-Aldrich shRNA Panels and shRNA for IL2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000586 REFSEQ mRNAs for IL2 gene: NM_000586.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000586               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000586                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000586                                  untagged cDNA clone in CMV expression vector: NM_000586  Additional cDNA sequence: AB451325.1 AB451454.1 AF228636.1 AF532913.1 AY283686.1 AY523040.1 BC066254.1 BC066255.1 BC066256.1 BC066257.1 BC070338.1 DQ231169.1 DQ861285.1 S77834.1 S77835.1 S82692.1 U25676.1 V00564.1 X01586.1 1 DOTS entry: DT.210021 24/40 AceView cDNA sequences (see all 40
):BC066257 CD559748 CD559749 X01586 BC066255 AF532913 CD013917 S82692 CD638487 BC070338 S77834 CD642113 CD520719 BC066256 BC066254 CD521982 NM_000586 AY523040 CD559408 CD559416 CD521790 CD638573 CD641180 CD521264
highest scoring ESTs for IL2:S82692 AF228636 AY283686 AY523040 BC066254 BC066255 BC066256 BC066257 BC070338 CD520719 Unigene Cluster for IL2: Interleukin 2 Hs.89679 [show with all ESTs]Unigene Representative Sequence: S82692
GeneLoc Exon Structure
2 Alternative Splicing Database (ASD) splice patterns (SP) for IL2
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | |
| SP1: | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for IL2
1 Ensembl transcript including schematic representation: ENST00000226730
|
Expression for IL2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| IL2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for IL2
1 / 2 / 3 4 probe-sets matching IL2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TGTGAATATG
SOURCE GeneReport for Unigene cluster: Hs.89679
Expression variation in blood from EXPOLDB for IL2 |
Orthologs for IL2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for IL2 gene from 5 species
About this table Species with no ortholog for IL2
ENSEMBL Gene Tree for IL2 | Paralogs for IL2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for IL2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for IL2 (up to first 250kb)
|
Disorders & Mutations for IL2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 147680 UniProtKB/Swiss-Prot: IL2_HUMAN, P60568
A chromosomal aberration involving IL2 is found in a form of T-cell acute lymphoblastic leukemia (T-ALL). Translocation t(4;16)(q26;p13) with involves TNFRSF1710/94 Novoseek disease relationships for IL2 gene (see all 94
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| metastatic renal cell carcinoma |
89.69 |
607 |
10685669 (4), 9457403 (4), 7754541 (3), 7490829 (3) (see all 99) |
| necrosis |
85.49 |
2589 |
11490833 (7), 2112520 (5), 12710650 (4), 1700673 (4) (see all 99) |
| metastatic melanoma |
84.19 |
480 |
9215828 (5), 10091789 (4), 12714884 (4), 11773161 (4) (see all 99) |
| carcinoma renal cell |
82.74 |
754 |
17264761 (5), 7773948 (4), 10760767 (4), 8336188 (4) (see all 99) |
| tumors |
82.16 |
4637 |
2302724 (7), 11490833 (7), 18256831 (7), 7523315 (7) (see all 99) |
| melanoma |
78.65 |
1049 |
11125310 (7), 7833372 (5), 9166506 (5), 16365605 (5) (see all 99) |
| severe combined immunodeficiency, x-linked |
74.75 |
69 |
8299698 (3), 7937790 (2), 7930609 (2), 8128231 (1) (see all 35) |
| renal cancer |
73.58 |
183 |
2253233 (4), 9166506 (4), 1567700 (4), 7960603 (3) (see all 99) |
| stable disease |
73.08 |
44 |
16224275 (2), 8249176 (2), 7754541 (1), 11448899 (1) (see all 32) |
| kidney cancer metastatic |
70.96 |
20 |
17105418 (3), 17105423 (2), 15778577 (2), 19409039 (2) (see all 12) |
About this table
Genatlas disease: IL2 immunodeficiency,severe,combined Human Gene Mutation Database: IL2 Genetic Association Database: IL2 Human Genome Epidemiology Navigator: IL2 (141 documents) Tumor Gene Database: IL2
|
Medical News for IL2(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for IL2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/5451 PubMed articles for IL2 gene (see all 5451
):- Recipient gene polymorphisms in the Th-1 cytokines IL-2 and IFN-gamma in relation to acute rejection and graft vascular disease after clinical heart transplantation. (PubMed id 12727483)1, 3, 6 Holweg C.T....Baan C.C. (2003)
- Interleukin-2 gene polymorphisms associated with increased risk of gastric atrophy from Helicobacter pylori infection. (PubMed id 15904474)1, 3, 6 Togawa S....Hamajima N. (2005)
- Allelic expression and interleukin-2 polymorphisms in multiple sclerosis. (PubMed id 11525806)1, 3, 6 Matesanz F....Alcina A. (2001)
- Cytokine gene polymorphisms and susceptibility to juvenile idiopathic arthritis. British Paediatric Rheumatology Study Group. (PubMed id 11315919)1, 3, 6 Donn R.P....Thomson W. (2001)
- Behavioral risk exposure and host genetics of susceptibility to HIV-1 infection. (PubMed id 16323127)1, 3, 6 Shrestha S....Smith M.W. (2006)
- Genetic variation in TNF and IL10 and risk of non-Hodgkin lymphoma: a report from the InterLymph Consortium. (PubMed id 16389181)1, 3, 6 Rothman N....Nieters A. (2006)
- Family based association analysis of the IL2 and IL15 genes in allergic disorders. (PubMed id 16333313)1, 3, 6 Christensen U....Borglum A.D. (2006)
- Structure of the quaternary complex of interleukin-2 with its alpha, beta, and gammac receptors. (PubMed id 16293754)1, 3, 4 Wang X.... Garcia K.C. (2005)
- Genetic variations in IL6 associate with intervertebral disc disease characterized by sciatica. (PubMed id 15733644)1, 3, 6 Noponen-Hietala N....Ala-Kokko L. (2005)
- Association of polymorphisms in Th1, Th2 cytokine genes with hayfever and atopy in a subsample of EPIC-Heidelberg. (PubMed id 15005726)1, 3, 6 Nieters A....Becker N. (2004)
|
Search for IL2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing IL2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing IL2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing IL2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| ATLAS Chromosomes in Cancer entry for IL2 | Genetics and Cytogenetics in Oncology and Haematology | | R&D Systems' cytokine source book: IL-2 | http://www.rndsystems.com/molecule_detail.aspx?m=1638 | | Wikipedia | http://en.wikipedia.org/wiki/Interleukin_2 | | SeattleSNPs | http://pga.gs.washington.edu/data/il2/ | | SHMPD | http://shmpd.bii.a-star.edu.sg/gene.php?genestart=A&genename=IL2 |
|
| | | About This Section
| --
| Services for IL2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for IL2:

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Incremental update: 13 Oct 2009
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