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Aliases for IL18 Gene

Aliases for IL18 Gene

  • Interleukin 18 2 3 5
  • Interleukin 18 (Interferon-Gamma-Inducing Factor) 2 3
  • IFN-Gamma-Inducing Factor 3 4
  • Interleukin-1 Gamma 3 4
  • Iboctadekin 3 4
  • IL-1 Gamma 3 4
  • IL-18 3 4
  • IL1F4 3 4
  • IGIF 3 4
  • Interferon-Gamma-Inducing Factor 2
  • Interferon Gamma-Inducing Factor 4
  • Interleukin-18 3
  • IL-1g 3

External Ids for IL18 Gene

Previous GeneCards Identifiers for IL18 Gene

  • GC11M114366
  • GC11M113526
  • GC11M112047
  • GC11M111551
  • GC11M111519
  • GC11M107938
  • GC11M112013

Summaries for IL18 Gene

Entrez Gene Summary for IL18 Gene

  • The protein encoded by this gene is a proinflammatory cytokine that augments natural killer cell activity in spleen cells, and stimulates interferon gamma production in T-helper type I cells. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Aug 2011]

GeneCards Summary for IL18 Gene

IL18 (Interleukin 18) is a Protein Coding gene. Diseases associated with IL18 include Adult-Onset Still's Disease and Stachybotrys Chartarum. Among its related pathways are PEDF Induced Signaling and Tuberculosis. GO annotations related to this gene include cytokine activity.

UniProtKB/Swiss-Prot for IL18 Gene

  • Augments natural killer cell activity in spleen cells and stimulates interferon gamma production in T-helper type I cells.

Gene Wiki entry for IL18 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL18 Gene

Genomics for IL18 Gene

Regulatory Elements for IL18 Gene

Enhancers for IL18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G112155 1.6 FANTOM5 Ensembl ENCODE 26.7 +2.6 2575 11.5 FOXA2 SIN3A FEZF1 BRCA1 YY1 FOS ZHX2 REST MIER2 CREB3 IL18 BCO2 TIMM8B SDHD C11orf88
GH11G112119 1.4 FANTOM5 Ensembl ENCODE 20.3 +43.2 43247 3.1 BCOR PKNOX1 ZNF146 JUN ZMYM3 GATA2 EED FOS JUNB CEBPB IL18 TIMM8B SDHD TEX12 BCO2 LOC101928847 ALG9
GH11G112128 1 Ensembl ENCODE 11.4 +35.0 35035 2.2 KLF1 NFIB JUN KLF17 FOSL1 GATA3 ZBTB48 FOS PRDM10 TCF7L2 BCO2 IL18 TEX12 ENSG00000254638 TIMM8B SDHD C11orf57 PIH1D2 CRYAB HSPB2
GH11G112131 0.5 ENCODE 11.4 +32.3 32256 1.3 SCRT1 JUND SCRT2 HMBOX1 KDM1A IL18 TEX12 BCO2 ENSG00000254638 TIMM8B
GH11G112316 1.6 FANTOM5 Ensembl ENCODE dbSUPER 1.5 -154.0 -153990 2.5 TAL1 JUN RAD21 YY1 TCF12 ZNF316 GATA2 RCOR1 NFE2 TRIM24 RNU6-44P LOC283140 IL18 GC11P112339 GC11M112270
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IL18 on UCSC Golden Path with GeneCards custom track

Promoters for IL18 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000044966 217 601 GTF2F1 TBP CTCF CBX3 RFX1 TAF1 CHD1 CEBPB ELF1 EP300

Genomic Location for IL18 Gene

Chromosome:
11
Start:
112,143,251 bp from pter
End:
112,164,117 bp from pter
Size:
20,867 bases
Orientation:
Minus strand

Genomic View for IL18 Gene

Genes around IL18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL18 Gene

Proteins for IL18 Gene

  • Protein details for IL18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14116-IL18_HUMAN
    Recommended name:
    Interleukin-18
    Protein Accession:
    Q14116
    Secondary Accessions:
    • O75599
    • Q6FGY3
    • Q6WWJ7

    Protein attributes for IL18 Gene

    Size:
    193 amino acids
    Molecular mass:
    22326 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for IL18 Gene

    Alternative splice isoforms for IL18 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IL18 Gene

Post-translational modifications for IL18 Gene

  • The pro-IL-18 precursor is processed by CASP1 or CASP4 to yield the active form.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IL18 Gene

Antibody Products

Assay Products

No data available for DME Specific Peptides for IL18 Gene

Domains & Families for IL18 Gene

Gene Families for IL18 Gene

Protein Domains for IL18 Gene

Suggested Antigen Peptide Sequences for IL18 Gene

Graphical View of Domain Structure for InterPro Entry

Q14116

UniProtKB/Swiss-Prot:

IL18_HUMAN :
  • Belongs to the IL-1 family.
Family:
  • Belongs to the IL-1 family.
genes like me logo Genes that share domains with IL18: view

Function for IL18 Gene

Molecular function for IL18 Gene

GENATLAS Biochemistry:
interleukin 18,interferon-gamma inducing factor,involved in Th1-mediated cellular immunity
UniProtKB/Swiss-Prot Function:
Augments natural killer cell activity in spleen cells and stimulates interferon gamma production in T-helper type I cells.

Gene Ontology (GO) - Molecular Function for IL18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005125 cytokine activity TAS 11598150
GO:0005515 protein binding IPI 25261253
genes like me logo Genes that share ontologies with IL18: view
genes like me logo Genes that share phenotypes with IL18: view

Animal Models for IL18 Gene

MGI Knock Outs for IL18:

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for IL18 Gene

Localization for IL18 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IL18 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL18 gene
Compartment Confidence
extracellular 5
cytosol 5
nucleus 4
plasma membrane 2
cytoskeleton 2
mitochondrion 2
lysosome 2
golgi apparatus 2
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for IL18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS 11598150
GO:0005615 extracellular space IDA 21323571
GO:0005829 cytosol TAS --
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with IL18: view

Pathways & Interactions for IL18 Gene

genes like me logo Genes that share pathways with IL18: view

SIGNOR curated interactions for IL18 Gene

Activates:

Gene Ontology (GO) - Biological Process for IL18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000165 MAPK cascade IMP 21147091
GO:0001525 angiogenesis IDA 11466388
GO:0006954 inflammatory response IDA 21147091
GO:0006955 immune response TAS 8999896
GO:0007267 cell-cell signaling TAS 9792649
genes like me logo Genes that share ontologies with IL18: view

Drugs & Compounds for IL18 Gene

(77) Drugs for IL18 Gene - From: PharmGKB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Ribavirin Approved Pharma 1003
Tacrolimus Approved, Investigational Pharma 1102
interferons Pharma 2175

(60) Additional Compounds for IL18 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with IL18: view

Transcripts for IL18 Gene

Unigene Clusters for IL18 Gene

Interleukin 18 (interferon-gamma-inducing factor):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IL18 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7
SP1: - - - -
SP2: - -
SP3: -
SP4:
SP5:

Relevant External Links for IL18 Gene

GeneLoc Exon Structure for
IL18
ECgene alternative splicing isoforms for
IL18

Expression for IL18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL18 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for IL18 Gene

This gene is overexpressed in Esophagus - Mucosa (x7.1), Skin - Sun Exposed (Lower leg) (x6.4), Skin - Not Sun Exposed (Suprapubic) (x6.0), and Vagina (x4.5).

Protein differential expression in normal tissues from HIPED for IL18 Gene

This gene is overexpressed in Lymph node (11.0), Oral epithelium (10.0), and Heart (8.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for IL18 Gene



NURSA nuclear receptor signaling pathways regulating expression of IL18 Gene:

IL18

SOURCE GeneReport for Unigene cluster for IL18 Gene:

Hs.83077

Evidence on tissue expression from TISSUES for IL18 Gene

  • Blood(4.7)
  • Liver(4.5)
  • Skin(3.3)
  • Spleen(3.3)
  • Lymph node(3.2)
  • Kidney(2.9)
  • Lung(2.9)
  • Intestine(2.8)
  • Bone marrow(2.6)
  • Nervous system(2.3)
  • Heart(2.1)
  • Urine(2.1)
  • Muscle(2)
genes like me logo Genes that share expression patterns with IL18: view

Primer Products

No data available for Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL18 Gene

Orthologs for IL18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IL18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IL18 34 35
  • 99.48 (n)
cow
(Bos Taurus)
Mammalia IL18 34 35
  • 86.36 (n)
dog
(Canis familiaris)
Mammalia IL18 34 35
  • 84.55 (n)
mouse
(Mus musculus)
Mammalia Il18 34 16 35
  • 75.53 (n)
rat
(Rattus norvegicus)
Mammalia Il18 34
  • 74.39 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 43 (a)
OneToMany
-- 35
  • 35 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia IL18 35
  • 36 (a)
OneToOne
chicken
(Gallus gallus)
Aves IL18 35
  • 33 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia IL18 35
  • 29 (a)
OneToOne
Species where no ortholog for IL18 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IL18 Gene

ENSEMBL:
Gene Tree for IL18 (if available)
TreeFam:
Gene Tree for IL18 (if available)

Paralogs for IL18 Gene

(1) SIMAP similar genes for IL18 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with IL18: view

No data available for Paralogs for IL18 Gene

Variants for IL18 Gene

Sequence variations from dbSNP and Humsavar for IL18 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000120984 -- 112,145,765(+) AAAAG(A/G)AAAAA intron-variant
rs1000157208 -- 112,151,016(+) TTAAT(G/T)TGCCA intron-variant
rs1000352535 -- 112,160,072(+) TCATT(C/T)TTAAC intron-variant
rs1000372405 -- 112,144,531(+) TGTAA(A/G)CCACC intron-variant
rs1000722644 -- 112,144,350(+) GCCTC(A/T)GCCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IL18 Gene

Variant ID Type Subtype PubMed ID
esv2745077 CNV deletion 23290073
nsv1134175 CNV deletion 24896259
nsv519192 CNV gain 19592680

Variation tolerance for IL18 Gene

Residual Variation Intolerance Score: 68.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.06; 1.31% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IL18 Gene

Human Gene Mutation Database (HGMD)
IL18
SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IL18 Gene

Disorders for IL18 Gene

MalaCards: The human disease database

(66) MalaCards diseases for IL18 Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
adult-onset still's disease
  • adult onset still's disease
stachybotrys chartarum
  • stachybotrys atra
uremic pruritus
pleural tuberculosis
  • pearly disease
spastic cerebral palsy
- elite association - COSMIC cancer census association via MalaCards
Search IL18 in MalaCards View complete list of genes associated with diseases

Relevant External Links for IL18

Genetic Association Database (GAD)
IL18
Human Genome Epidemiology (HuGE) Navigator
IL18
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL18
genes like me logo Genes that share disorders with IL18: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IL18 Gene

Publications for IL18 Gene

  1. Genetic predisposition to natural rubber latex allergy differs between health care workers and high-risk patients. (PMID: 20418295) Monitto C.L. … Brown R.H. (Anesth. Analg. 2010) 3 22 46 64
  2. [Correlations between serum interleukin-18 (IL-18) level, IL-18 gene promoter polymorphisms and the development of sepsis in children]. (PMID: 20441695) Cai L.L. … Zeng X. (Zhonghua Er Ke Za Zhi 2010) 3 22 46 64
  3. Genetic variants in immunoregulatory genes and risk for childhood lymphomas. (PMID: 19508433) Andrie E. … Petridou E.T. (Eur. J. Haematol. 2009) 3 22 46 64
  4. Analysis of inflammation- and atherosclerosis-related gene polymorphisms in branch retinal vein occlusion. (PMID: 19347053) Steinbrugger I. … Weger M. (Mol. Vis. 2009) 3 22 46 64
  5. [Correlation of serum IL-18 level and IL-18 gene promoter polymorphisms to the risk of cervical cancer]. (PMID: 18504197) Qi T. … Bao J. (Nan Fang Yi Ke Da Xue Xue Bao 2008) 3 22 46 64

Products for IL18 Gene

Sources for IL18 Gene

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