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Aliases & Descriptions for IL12B
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CLMF 1, 2 | | CLMF2 1, 2 | | IL-12B 1, 2, 3 | | NKSF 1, 2 | | NKSF2 2, 3, 5 | | OTTHUMP00000160820 2 |
| | | Descriptions |
|---|
| CLMF p40 3 | | Cytotoxic lymphocyte maturation factor 40 kDa subunit 3 | | IL-12 subunit p40 3 | | IL12, subunit p40 2 | | NK cell stimulatory factor chain 2 3 | | interleukin 12, p40 2 | | interleukin 12B 2 | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) 2 | | interleukin-12 beta chain 2 | | natural killer cell stimulatory factor, 40 kD subunit 2 |
|
| | Search outside databases for aliases for IL12B genePrevious GC identifers: GC05M158596 GC05M159251 GC05M158722 |
Summaries for IL12B(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for IL12B: This gene encodes a subunit of interleukin 12, a cytokine that acts on T and natural killer cells, and has a broad array of biological activities. Interleukin 12 is a disulfide-linked heterodimer composed of the 40 kD cytokine receptor like subunit encoded by this gene, and a 35 kD subunit encoded by IL12A. This cytokine is expressed by activated macrophages that serve as an essential inducer of Th1 cells development. This cytokine has been found to be important for sustaining a sufficient number of memory/effector Th1 cells to mediate long-term protection to an intracellular pathogen. Overexpression of this gene was observed in the central nervous system of patients with multiple sclerosis (MS), suggesting a role of this cytokine in the pathogenesis of the disease. The promoter polymorphism of this gene has been reported to be associated with the severity of atopic and non-atopic asthma in children. [provided by RefSeq] UniProtKB/Swiss-Prot: IL12B_HUMAN, P29460Function: Associates with IL23A to form the IL-23 interleukin, an heterodimeric cytokine which functions in innate and adaptive immunity. IL-23 may constitute with IL-17 an acute response to infection in peripheral tissues. IL-23 binds to an heterodimeric receptor complex composed of IL12RB1 and IL23R, activates the Jak-Stat signaling cascade, stimulates memory rather than naive T-cells and promotes production of proinflammatory cytokines. IL-23 induces autoimmune inflammation and thus may be responsible for autoimmune inflammatory diseases and may be important for tumorigenesisGene Wiki entry for IL12B (Interleukin-12_subunit_beta) |
Genomic Location for IL12B
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the IL12B gene 
Entrez Gene cytogenetic band: 5q31.1-q33.1 Ensembl cytogenetic band: 5q33.3 HGNC cytogenetic band: 5q31.1-q33.1IL12B Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M158674:
(about GC identifiers)
Start:
|
158,674,369 bp from pter |
End:
|
158,690,059 bp from pter |
Size:
|
15,691 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000005.8 NT_023133.12
| Proteins for IL12B
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: IL12B_HUMAN, P29460 (See
protein sequence)Recommended Name: Interleukin-12 subunit beta precursor Size: 328 amino acids; 37169 Da
Subunit: Heterodimer with IL12A; disulfide-linked. The heterodimer is known as interleukin IL-12. Heterodimer with IL23A; disulfide-linked. The heterodimer is known as interleukin IL-23. Also secreted as a monomer
Subcellular location: Secreted
PDB structures from and Proteopedia :1F42 (3D)
 1F45 (3D)
 3D85 (3D)
 3D87 (3D)
 3DUH (3D)
 Post-translational modifications:
Known to be C-mannosylated in the recombinant protein; it is not yet known for sure if the wild-type protein is also modified1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002178.2
ENSEMBL proteins: ENSP00000231228
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for IL12B: Assays for IL12B: | Protein
Domains/ Families for IL12B(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P29460
ProtoNet protein and cluster: P29460 2 Blocks protein families: IPB003530 Long hematopoietin receptor IPB003598 Immunoglobulin C-2 type
UniProtKB/Swiss-Prot: IL12B_HUMAN, P29460Similarity: Belongs to the type I cytokine receptor family. Type 3 subfamilySimilarity: Contains 1 fibronectin type-III domainSimilarity: Contains 1 Ig-like C2-type (immunoglobulin-like) domain | Gene Function for IL12B
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (IL12B) | |  | Millipore RNAi Products for the Analysis of IL12B Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (IL12B) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002187
Applied Biosystems Silencer® siRNAs for IL12B
Sigma-Aldrich siRNA and siRNA Panels for IL12B  Sigma-Aldrich shRNA Panels and shRNA for IL12B  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002187                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002187                                  untagged cDNA clone in CMV expression vector: NM_002187 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002187
UniProtKB/Swiss-Prot: IL12B_HUMAN, P29460Function: Cytokine that can act as a growth factor for activated T and NK cells, enhance the lytic activity of NK/lymphokine-activated killer cells, and stimulate the production of IFN-gamma by resting PBMCFunction: Associates with IL23A to form the IL-23 interleukin, an heterodimeric cytokine which functions in innate and adaptive immunity. IL-23 may constitute with IL-17 an acute response to infection in peripheral tissues. IL-23 binds to an heterodimeric receptor complex composed of IL12RB1 and IL23R, activates the Jak-Stat signaling cascade, stimulates memory rather than naive T-cells and promotes production of proinflammatory cytokines. IL-23 induces autoimmune inflammation and thus may be responsible for autoimmune inflammatory diseases and may be important for tumorigenesisGenatlas biochemistry entry for IL12B:interleukin 12,beta polypeptide (40kDa),dimerizing with IL12A,secreted by macrophages and dendritic cells,stimulating IFNG production,chemotactic molecule for macrophages,antagonizing IL12P706 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Il12b):
5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8
): About this table | Pathways & Interactions for IL12B
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for IL12B (Your Favorite Gene powered by Ingenuity) (see all 6
) 
Gene Network CentralTM Interacting Genes and Proteins Network for IL12B 
5/153 Interacting proteins for IL12B (P294601 ENSP000002312283) via UniProtKB, MINT, and/or STRING (see all 153
)About this table
5/17 Gene Ontology (GO) biological process terms (links to tree view) (see all 17
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0002323 | natural killer cell activation during immune response |
IEA | -- | | GO:0002860 | positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target |
IDA | 7903063 | | GO:0007050 | cell cycle arrest |
IDA | 16942485 | | GO:0007166 | cell surface receptor linked signal transduction |
IEA | -- | | GO:0010224 | response to UV-B |
IDA | 8992506 | About this table
|
Drugs & Compounds for IL12B(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for IL12B 10/15 Novoseek chemical compound relationships for IL12B gene (see all 15
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| il-12 |
87.11 |
10 |
10525320 (1), 15860229 (1), 16754651 (1), 11356252 (1) (see all 8) |
| rantes |
47.76 |
7 |
10570261 (2), 16388854 (1), 19220953 (1), 15182255 (1) (see all 5) |
| il 10 |
45.78 |
4 |
16519741 (3), 17653830 (1) |
| lipoteichoic acid |
42.94 |
4 |
17567674 (2), 8675286 (1), 15146415 (1) |
| poly(i-c) |
27.89 |
2 |
12845500 (1) |
| ccl4 |
16.93 |
1 |
15182255 (1) |
| pd 98,059 |
15.70 |
4 |
12603851 (1), 12704121 (1) |
| nitric oxide |
12.82 |
26 |
17291992 (7), 12424623 (2), 14573655 (2), 12857749 (1) (see all 11) |
| peptidoglycan |
9.54 |
2 |
15860229 (1) |
| lipid |
2.49 |
1 |
19438591 (1) |
About this table
|
Transcripts for IL12B(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (IL12B) | |  | Millipore RNAi Products for the Analysis of IL12B Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (IL12B) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002187
Sigma-Aldrich siRNA and siRNA Panels for IL12B  Sigma-Aldrich shRNA Panels and shRNA for IL12B  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002187 REFSEQ mRNAs for IL12B gene: NM_002187.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002187               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002187                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002187                                  untagged cDNA clone in CMV expression vector: NM_002187  Additional cDNA sequence: AF180563.1 AY046592.1 AY046593.1 BC067498.1 BC067499.1 BC067500.1 BC067501.1 BC067502.1 BC074723.2 EF173865.1 M65272.1 M65290.1 1 DOTS entry: DT.303521 22 AceView cDNA sequences:BC067500 AY046593 M65272 BC067502 AF180563 BC067499 BC067501 BC074723 NM_002187 CD559453 CD559607 CD559449 CD559605 CD559450 BC067498 M65290 CD559448 CD559602 CD559451 CD559603 CK130264 CD559604
highest scoring ESTs for IL12B:M65272 M65290 AF180563 AY046593 BC067498 BC067499 BC067500 BC067501 BC067502 BC074723 Unigene Cluster for IL12B: Interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) Hs.674 [show with all ESTs]Unigene Representative Sequence: NM_002187
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000231228
|
Expression for IL12B
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| IL12B expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for IL12B
1 / 2 / 3 3 probe-sets matching IL12B gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.674
Expression variation in blood from EXPOLDB for IL12B |
Orthologs for IL12B
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for IL12B gene from 5/7 species (see all 7
)
About this table Species with no ortholog for IL12B
ENSEMBL Gene Tree for IL12B | Paralogs for IL12B(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for IL12B(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for IL12B (up to first 250kb)
|
Disorders & Mutations for IL12B
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 161561 disorders: 209950 600807 UniProtKB/Swiss-Prot: IL12B_HUMAN, P29460
Defects in IL12B are a cause of mendelian susceptibility to mycobacterial disease (MSMD) [MIM:209950]; also known as familial disseminated atypical mycobacterial infection. This rare condition confers predisposition to illness caused by moderately virulent mycobacterial species, such as Bacillus Calmette-Guerin (BCG) vaccine and environmental non-tuberculous mycobacteria, and by the more virulent Mycobacterium tuberculosis. Other microorganisms rarely cause severe clinical disease in individuals with susceptibility to mycobacterial infections, with the exception of Salmonella which infects less than 50% of these individuals. The pathogenic mechanism underlying MSMD is the impairment of interferon-gamma mediated immunity, whose severity determines the clinical outcome. Some patients die of overwhelming mycobacterial disease with lepromatous-like lesions in early childhood, whereas others develop, later in life, disseminated but curable infections with tuberculoid granulomas. MSMD is a genetically heterogeneous disease with autosomal recessive, autosomal dominant or X-linked inheritance10/51 Novoseek disease relationships for IL12B gene (see all 51
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| mycobacterial infection |
57.14 |
3 |
9722917 (1), 12595896 (1), 17445208 (1) |
| necrosis |
54.95 |
30 |
9856837 (2), 8698475 (1), 12603851 (1), 17727629 (1) (see all 27) |
| psoriasis |
50.42 |
14 |
15102082 (3), 12413772 (1), 18800148 (1), 18650833 (1) (see all 10) |
| multiple sclerosis |
39.63 |
5 |
15579375 (1), 11110796 (1), 12325088 (1), 18082575 (1) (see all 5) |
| hypersensitivity contact |
37.24 |
2 |
9605132 (2) |
| autoimmune diseases |
33.19 |
2 |
15993716 (1), 18587636 (1) |
| tumors |
32.17 |
27 |
9856837 (2), 8698475 (1), 12603851 (1), 19330264 (1) (see all 24) |
| inflammation |
28.68 |
11 |
11157054 (3), 12702051 (1), 15007350 (1), 13679443 (1) (see all 8) |
| tuberculosis |
27.12 |
8 |
16367946 (1), 18522869 (1), 17392024 (1), 14551880 (1) (see all 8) |
| inflammatory bowel diseases |
26.62 |
3 |
11515847 (2), 18082575 (1) |
About this table
1 PharmGKB disease relationship for IL12B gene
| Disease |
PharmGKB Relations |
PubMed IDs for articles supporting these relationships |
| Asthma | GN   | 15322986 | About this table
Genatlas disease: IL12B susceptibility to BCG,non tuberculous mycobacterial and salmonella infections,with the presence of mature granulomas and a secundary impairment of IFNG production Human Gene Mutation Database: IL12B Genetic Association Database: IL12B Human Genome Epidemiology Navigator: IL12B (114 documents)
|
Medical News for IL12B(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for IL12B (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/469 PubMed articles for IL12B gene (see all 469
):- The IL12B gene is associated with asthma. (PubMed id 15322986)1, 3, 6, 7 Randolph A.G....Weiss S.T. (2004)
- Cloning of cDNA for natural killer cell stimulatory factor, a heterodimeric cytokine with multiple biologic effects on T and natural killer cells. (PubMed id 1673147)1, 2, 3, 4 Wolf S.F....Perussia B. (1991)
- Lack of association between IL-12B gene polymorphism and autoimmune thyroid disease in Japanese patients. (PubMed id 15644581)1, 3, 6 Ikeda Y....Hashimoto K. (2004)
- Interleukin 12 (IL12B), interleukin 12 receptor (IL12RB1) and interleukin 23 (IL23A) gene polymorphism in systemic lupus erythematosus. (PubMed id 15941730)1, 3, 6 Sanchez E....Martin J. (2005)
- Associations between IL12B polymorphisms and tuberculosis in the Hong Kong Chinese population. (PubMed id 15295696)1, 3, 6 Tso H.W....Chiang A.K. (2004)
- Interleukin 12 (IL12B) and interleukin 12 receptor (IL12RB1) gene polymorphisms in rheumatoid arthritis. (PubMed id 15993716)1, 3, 6 Orozco G....Martin J. (2005)
- Polymorphisms in the IL-12B gene and outcome of HCV infection. (PubMed id 15871664)1, 3, 6 Houldsworth A....Cramp M.E. (2005)
- Influence of interleukin 12B (IL12B) polymorphisms on spontaneous and treatment-induced recovery from hepatitis C virus infection. (PubMed id 15464247)1, 3, 6 Mueller T....Berg T. (2004)
- Coexpression of two distinct genes is required to generate secreted bioactive cytotoxic lymphocyte maturation factor. (PubMed id 1674604)1, 3, 4 Gubler U....Gately M.K. (1991)
- Associations of the IL12B promoter polymorphism in longitudinal data from asthmatic patients 7 to 42 years of age. (PubMed id 15007350)1, 3, 6 Khoo S.K....Le Souef P. (2004)
|
Search for IL12B
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing IL12B
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing IL12B
(According to HUGE)
About This Section
| -- |
Specialized Databases showing IL12B(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| IL12Bbase | http://bioinf.uta.fi/IL12Bbase/ | | GeneReviews | http://www.genetests.org/query?gene=IL12B | | SeattleSNPs | http://pga.gs.washington.edu/data/il12b/ |
|
| | | About This Section
| --
| Services for IL12B(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for IL12B:

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 | | | | |
|
 |  |  |
| | Recombinant Proteins (IL12p70, IL12B, IL12 p35 + IL12 p70, IL12 p70, IL12, IL12 p40 + IL12 p70, IL12 p40) | | Antibodies (IL12p70, IL12B, IL12 p35 + IL12 p70, IL12 p70, IL12, IL12 p40 + IL12 p70, IL12 p40) |
| | | Search Tocris compounds for IL12B |
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Incremental update: 13 Oct 2009
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